RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 COL4A1P02462 1669 aa17■□□□□ 0.31
CDCA4P4-201ENST00000435216 LMOD1P29536 600 aaPredicted RBP16.99■□□□□ 0.31
CDCA4P4-201ENST00000435216 GNAI1P63096 354 aa16.99■□□□□ 0.31
CDCA4P4-201ENST00000435216 GRAPQ13588 217 aa16.99■□□□□ 0.31
CDCA4P4-201ENST00000435216 CNTROBQ8N137 903 aa16.99■□□□□ 0.31
CDCA4P4-201ENST00000435216 MPNDQ8N594 471 aa16.99■□□□□ 0.31
CDCA4P4-201ENST00000435216 GRAPLQ8TC17 118 aaPredicted RBP16.99■□□□□ 0.31
CDCA4P4-201ENST00000435216 C8orf58Q8NAV2 365 aa16.98■□□□□ 0.31
CDCA4P4-201ENST00000435216 RTFDC1Q9BY42 306 aaPredicted RBP16.98■□□□□ 0.31
CDCA4P4-201ENST00000435216 DUOX1Q9NRD9 1551 aa16.98■□□□□ 0.31
CDCA4P4-201ENST00000435216 TMEM88BA6NKF7 163 aa16.97■□□□□ 0.31
CDCA4P4-201ENST00000435216 FMR1Q06787 632 aaKnown RBP eCLIP16.97■□□□□ 0.31
CDCA4P4-201ENST00000435216 RIC3Q7Z5B4 369 aa16.97■□□□□ 0.31
CDCA4P4-201ENST00000435216 SUPT20HQ8NEM7 779 aa16.97■□□□□ 0.31
CDCA4P4-201ENST00000435216 CELF1Q92879 486 aaKnown RBP16.97■□□□□ 0.31
CDCA4P4-201ENST00000435216 LRRC37AA6NMS7 1700 aa16.96■□□□□ 0.31
CDCA4P4-201ENST00000435216 CALD1Q05682 793 aaKnown RBP16.96■□□□□ 0.31
CDCA4P4-201ENST00000435216 CXCL9Q07325 125 aa16.96■□□□□ 0.31
CDCA4P4-201ENST00000435216 GOLGA2Q08379 1002 aa16.96■□□□□ 0.31
CDCA4P4-201ENST00000435216 ZNRF3Q9ULT6 936 aa16.96■□□□□ 0.31
CDCA4P4-201ENST00000435216 CNTNAP1P78357 1384 aa16.96■□□□□ 0.31
CDCA4P4-201ENST00000435216 IRS4O14654 1257 aaPredicted RBP16.95■□□□□ 0.3
CDCA4P4-201ENST00000435216 RAD17O75943 681 aa16.95■□□□□ 0.3
CDCA4P4-201ENST00000435216 KIAA2012Q0VF49 1180 aa16.95■□□□□ 0.3
CDCA4P4-201ENST00000435216 JARID2Q92833 1246 aaPredicted RBP16.95■□□□□ 0.3
CDCA4P4-201ENST00000435216 MYD88Q99836 296 aa16.95■□□□□ 0.3
CDCA4P4-201ENST00000435216 SF3B3Q15393 1217 aaKnown RBP16.94■□□□□ 0.3
CDCA4P4-201ENST00000435216 TSPYL6Q8N831 410 aa16.94■□□□□ 0.3
CDCA4P4-201ENST00000435216 TSR2Q969E8 191 aaKnown RBP16.94■□□□□ 0.3
CDCA4P4-201ENST00000435216 VPS33BQ9H267 617 aa16.94■□□□□ 0.3
CDCA4P4-201ENST00000435216 VEGFBP49765 207 aa16.93■□□□□ 0.3
CDCA4P4-201ENST00000435216 GMPSP49915 693 aaPredicted RBP16.93■□□□□ 0.3
CDCA4P4-201ENST00000435216 TRIM28Q13263 835 aaKnown RBP16.93■□□□□ 0.3
CDCA4P4-201ENST00000435216 GPRC5DQ9NZD1 345 aa16.93■□□□□ 0.3
CDCA4P4-201ENST00000435216 NSFL1CQ9UNZ2 370 aaKnown RBP16.93■□□□□ 0.3
CDCA4P4-201ENST00000435216 YDJCA8MPS7 323 aa16.92■□□□□ 0.3
CDCA4P4-201ENST00000435216 TRAF5O00463 557 aa16.92■□□□□ 0.3
CDCA4P4-201ENST00000435216 CIAPIN1Q6FI81 312 aa16.92■□□□□ 0.3
CDCA4P4-201ENST00000435216 USP50Q70EL3 339 aaPredicted RBP16.92■□□□□ 0.3
CDCA4P4-201ENST00000435216 GPR101Q96P66 508 aaPredicted RBP16.92■□□□□ 0.3
CDCA4P4-201ENST00000435216 SHTN1A0MZ66 631 aa16.91■□□□□ 0.3
CDCA4P4-201ENST00000435216 RIMBP2O15034 1052 aa16.91■□□□□ 0.3
CDCA4P4-201ENST00000435216 GPSM2P81274 684 aa16.91■□□□□ 0.3
CDCA4P4-201ENST00000435216 CCDC30Q5VVM6 783 aa16.91■□□□□ 0.3
CDCA4P4-201ENST00000435216 TMC4Q7Z404 712 aa16.91■□□□□ 0.3
CDCA4P4-201ENST00000435216 ZBTB38Q8NAP3 1195 aaPredicted RBP16.91■□□□□ 0.3
CDCA4P4-201ENST00000435216 CCDC85AQ96PX6 553 aaPredicted RBP16.91■□□□□ 0.3
CDCA4P4-201ENST00000435216 BCL2L13Q9BXK5 485 aa16.91■□□□□ 0.3
CDCA4P4-201ENST00000435216 SEC31BQ9NQW1 1179 aa16.91■□□□□ 0.3
CDCA4P4-201ENST00000435216 ADARB2Q9NS39 739 aaKnown RBP16.91■□□□□ 0.3
CDCA4P4-201ENST00000435216 ABT1Q9ULW3 272 aaKnown RBP16.91■□□□□ 0.3
CDCA4P4-201ENST00000435216 C6orf229H3BNL8 230 aa16.9■□□□□ 0.3
CDCA4P4-201ENST00000435216 CAPN15O75808 1086 aa16.9■□□□□ 0.3
CDCA4P4-201ENST00000435216 WASHC4Q2M389 1173 aa16.9■□□□□ 0.3
CDCA4P4-201ENST00000435216 TNS4Q8IZW8 715 aa16.9■□□□□ 0.3
CDCA4P4-201ENST00000435216 DBNDD1Q9H9R9 158 aa16.9■□□□□ 0.3
CDCA4P4-201ENST00000435216 POLLQ9UGP5 575 aa16.9■□□□□ 0.3
CDCA4P4-201ENST00000435216 RPS8P62241 208 aaKnown RBP16.89■□□□□ 0.29
CDCA4P4-201ENST00000435216 DEFB115Q30KQ5 88 aa16.89■□□□□ 0.29
CDCA4P4-201ENST00000435216 WWC1Q8IX03 1113 aa16.89■□□□□ 0.29
CDCA4P4-201ENST00000435216 METTL22Q9BUU2 404 aaPredicted RBP16.89■□□□□ 0.29
CDCA4P4-201ENST00000435216 MAP3K2Q9Y2U5 619 aa16.89■□□□□ 0.29
CDCA4P4-201ENST00000435216 ZBTB12Q9Y330 459 aaPredicted RBP16.89■□□□□ 0.29
CDCA4P4-201ENST00000435216 RASSF10A6NK89 507 aa16.88■□□□□ 0.29
CDCA4P4-201ENST00000435216 FOXN1O15353 648 aa16.88■□□□□ 0.29
CDCA4P4-201ENST00000435216 TNIP1Q15025 636 aa16.88■□□□□ 0.29
CDCA4P4-201ENST00000435216 DOK7Q18PE1 504 aa16.88■□□□□ 0.29
CDCA4P4-201ENST00000435216 CCDC191Q8NCU4 936 aa16.88■□□□□ 0.29
CDCA4P4-201ENST00000435216 TRPM4Q8TD43 1214 aa16.88■□□□□ 0.29
CDCA4P4-201ENST00000435216 MRS2Q9HD23 443 aa16.88■□□□□ 0.29
CDCA4P4-201ENST00000435216 KCNQ5Q9NR82 932 aa16.88■□□□□ 0.29
CDCA4P4-201ENST00000435216 CWC25Q9NXE8 425 aaPredicted RBP16.88■□□□□ 0.29
CDCA4P4-201ENST00000435216 TRPM7Q96QT4 1865 aa16.87■□□□□ 0.29
CDCA4P4-201ENST00000435216 PI4KAP2A4QPH2 592 aa16.87■□□□□ 0.29
CDCA4P4-201ENST00000435216 DDX58O95786 925 aaKnown RBP16.87■□□□□ 0.29
CDCA4P4-201ENST00000435216 PCCAP05165 728 aaPredicted RBP16.87■□□□□ 0.29
CDCA4P4-201ENST00000435216 HIRAP54198 1017 aaPredicted RBP16.87■□□□□ 0.29
CDCA4P4-201ENST00000435216 CST9Q5W186 159 aa16.87■□□□□ 0.29
CDCA4P4-201ENST00000435216 G2E3Q7L622 706 aa16.87■□□□□ 0.29
CDCA4P4-201ENST00000435216 PI4KAP1Q8N8J0 262 aa16.87■□□□□ 0.29
CDCA4P4-201ENST00000435216 CNOT7Q9UIV1 285 aaKnown RBP16.87■□□□□ 0.29
CDCA4P4-201ENST00000435216 SALL2Q9Y467 1007 aaPredicted RBP16.87■□□□□ 0.29
CDCA4P4-201ENST00000435216 PSMD14O00487 310 aa16.86■□□□□ 0.29
CDCA4P4-201ENST00000435216 IGKV5-2P06315 115 aa16.86■□□□□ 0.29
CDCA4P4-201ENST00000435216 GRM1Q13255 1194 aa16.86■□□□□ 0.29
CDCA4P4-201ENST00000435216 CCDC27Q2M243 656 aa16.86■□□□□ 0.29
CDCA4P4-201ENST00000435216 TWISTNBQ3B726 338 aaPredicted RBP16.86■□□□□ 0.29
CDCA4P4-201ENST00000435216 PAXIP1Q6ZW49 1069 aaPredicted RBP16.86■□□□□ 0.29
CDCA4P4-201ENST00000435216 TBC1D16Q8TBP0 767 aa16.86■□□□□ 0.29
CDCA4P4-201ENST00000435216 GLIS2Q9BZE0 524 aaPredicted RBP16.86■□□□□ 0.29
CDCA4P4-201ENST00000435216 ECE2O60344 883 aa16.85■□□□□ 0.29
CDCA4P4-201ENST00000435216 PDE8AO60658 829 aa16.85■□□□□ 0.29
CDCA4P4-201ENST00000435216 CWF19L2Q2TBE0 894 aaKnown RBP16.85■□□□□ 0.29
CDCA4P4-201ENST00000435216 CCDC152Q4G0S7 254 aa16.85■□□□□ 0.29
CDCA4P4-201ENST00000435216 KSR2Q6VAB6 950 aa16.85■□□□□ 0.29
CDCA4P4-201ENST00000435216 MICALL2Q8IY33 904 aa16.85■□□□□ 0.29
CDCA4P4-201ENST00000435216 STK31Q9BXU1 1019 aa16.85■□□□□ 0.29
CDCA4P4-201ENST00000435216 CDHR2Q9BYE9 1310 aa16.85■□□□□ 0.29
CDCA4P4-201ENST00000435216 WDR33Q9C0J8 1336 aaKnown RBP16.85■□□□□ 0.29
CDCA4P4-201ENST00000435216 UFL1O94874 794 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms