RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 STRN4Q9NRL3 753 aa6.91□□□□□ -1.3
RFC3-202ENST00000434425 PDZRN3Q9UPQ7 1066 aa6.91□□□□□ -1.3
RFC3-202ENST00000434425 THSD7AQ9UPZ6 1657 aa6.9□□□□□ -1.3
RFC3-202ENST00000434425 ANKARQ7Z5J8 1434 aa6.9□□□□□ -1.31
RFC3-202ENST00000434425 TMEM88BA6NKF7 163 aa6.9□□□□□ -1.31
RFC3-202ENST00000434425 WASLO00401 505 aaPredicted RBP6.9□□□□□ -1.31
RFC3-202ENST00000434425 CALD1Q05682 793 aaKnown RBP6.9□□□□□ -1.31
RFC3-202ENST00000434425 MYSM1Q5VVJ2 828 aa6.9□□□□□ -1.31
RFC3-202ENST00000434425 NUTM2GQ5VZR2 741 aa6.9□□□□□ -1.31
RFC3-202ENST00000434425 ATL2Q8NHH9 583 aa6.9□□□□□ -1.31
RFC3-202ENST00000434425 RPS6KC1Q96S38 1066 aa6.9□□□□□ -1.31
RFC3-202ENST00000434425 SYNPO2Q9UMS6 1093 aa6.9□□□□□ -1.31
RFC3-202ENST00000434425 KIAA0232Q92628 1395 aa6.89□□□□□ -1.31
RFC3-202ENST00000434425 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.89□□□□□ -1.31
RFC3-202ENST00000434425 CCDC189A1A4V9 331 aa6.89□□□□□ -1.31
RFC3-202ENST00000434425 SPDYE5A6NIY4 337 aa6.89□□□□□ -1.31
RFC3-202ENST00000434425 HOXA2O43364 376 aa6.89□□□□□ -1.31
RFC3-202ENST00000434425 APPP05067 770 aa6.89□□□□□ -1.31
RFC3-202ENST00000434425 HSP90AA1P07900 732 aaKnown RBP6.89□□□□□ -1.31
RFC3-202ENST00000434425 TBC1D10BQ4KMP7 808 aaPredicted RBP6.89□□□□□ -1.31
RFC3-202ENST00000434425 HSP90AB3PQ58FF7 597 aa6.89□□□□□ -1.31
RFC3-202ENST00000434425 CREBRFQ8IUR6 639 aa6.89□□□□□ -1.31
RFC3-202ENST00000434425 CALR3Q96L12 384 aaKnown RBP6.89□□□□□ -1.31
RFC3-202ENST00000434425 CEP63Q96MT8 703 aa6.89□□□□□ -1.31
RFC3-202ENST00000434425 HS3ST6Q96QI5 342 aa6.89□□□□□ -1.31
RFC3-202ENST00000434425 MAP3K20Q9NYL2 800 aaKnown RBP6.89□□□□□ -1.31
RFC3-202ENST00000434425 TSKSQ9UJT2 592 aa6.89□□□□□ -1.31
RFC3-202ENST00000434425 SCINQ9Y6U3 715 aa6.89□□□□□ -1.31
RFC3-202ENST00000434425 CRYBG1Q9Y4K1 1723 aa6.89□□□□□ -1.31
RFC3-202ENST00000434425 CEP350Q5VT06 3117 aa6.88□□□□□ -1.31
RFC3-202ENST00000434425 IBSPP21815 317 aaPredicted RBP6.88□□□□□ -1.31
RFC3-202ENST00000434425 PDE3BQ13370 1112 aa6.88□□□□□ -1.31
RFC3-202ENST00000434425 BIRC2Q13490 618 aa6.88□□□□□ -1.31
RFC3-202ENST00000434425 CCDC184Q52MB2 194 aa6.88□□□□□ -1.31
RFC3-202ENST00000434425 NBPF10Q6P3W6 841 aaKnown RBP6.88□□□□□ -1.31
RFC3-202ENST00000434425 LARP1Q6PKG0 1096 aaKnown RBP6.88□□□□□ -1.31
RFC3-202ENST00000434425 EYA1Q99502 592 aa6.88□□□□□ -1.31
RFC3-202ENST00000434425 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.88□□□□□ -1.31
RFC3-202ENST00000434425 PRR12Q9ULL5 1215 aa6.88□□□□□ -1.31
RFC3-202ENST00000434425 KAT6BQ8WYB5 2073 aa6.87□□□□□ -1.31
RFC3-202ENST00000434425 DLC1Q96QB1 1528 aa6.87□□□□□ -1.31
RFC3-202ENST00000434425 BICDL2A1A5D9 508 aa6.87□□□□□ -1.31
RFC3-202ENST00000434425 RCCD1A6NED2 376 aa6.87□□□□□ -1.31
RFC3-202ENST00000434425 ATG7O95352 703 aa6.87□□□□□ -1.31
RFC3-202ENST00000434425 NBPF8Q3BBV2 869 aa6.87□□□□□ -1.31
RFC3-202ENST00000434425 NBPF14Q5TI25 921 aa6.87□□□□□ -1.31
RFC3-202ENST00000434425 RPUSD2Q8IZ73 545 aaKnown RBP6.87□□□□□ -1.31
RFC3-202ENST00000434425 LSM14AQ8ND56 463 aaKnown RBP6.87□□□□□ -1.31
RFC3-202ENST00000434425 NUDT16Q96DE0 195 aaKnown RBP6.87□□□□□ -1.31
RFC3-202ENST00000434425 SIN3AQ96ST3 1273 aa6.87□□□□□ -1.31
RFC3-202ENST00000434425 ZSWIM6Q9HCJ5 1215 aa6.87□□□□□ -1.31
RFC3-202ENST00000434425 ADGRB1O14514 1584 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 ADGRB2O60241 1585 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 CBFA2T2O43439 604 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 KCNQ2O43526 872 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 RGS20O76081 388 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 RASSF7Q02833 373 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 TCEAL1Q15170 157 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 ZNF710Q8N1W2 664 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 ZCRB1Q8TBF4 217 aaKnown RBP6.86□□□□□ -1.31
RFC3-202ENST00000434425 DCAF11Q8TEB1 546 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 GLMNQ92990 594 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 CDK19Q9BWU1 502 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 SPON1Q9HCB6 807 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 ABCF2Q9UG63 623 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 RREB1Q92766 1687 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 NUP188Q5SRE5 1749 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 PARD3Q8TEW0 1356 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 TULP4Q9NRJ4 1543 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 CAMTA1Q9Y6Y1 1673 aa6.86□□□□□ -1.31
RFC3-202ENST00000434425 RIMBP2O15034 1052 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 MAN1A1P33908 653 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 HDLBPQ00341 1268 aaKnown RBP6.85□□□□□ -1.31
RFC3-202ENST00000434425 CCDC144BQ3MJ40 725 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 CC2D1BQ5T0F9 858 aaKnown RBP6.85□□□□□ -1.31
RFC3-202ENST00000434425 NBPF6Q5VWK0 638 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 NUDT18Q6ZVK8 323 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 PTF1AQ7RTS3 328 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 NBPF5PQ86XG9 351 aaPredicted RBP6.85□□□□□ -1.31
RFC3-202ENST00000434425 TCP11L2Q8N4U5 519 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 ABTB2Q8N961 1025 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 C1orf131Q8NDD1 294 aaKnown RBP6.85□□□□□ -1.31
RFC3-202ENST00000434425 ZNF512BQ96KM6 892 aaPredicted RBP6.85□□□□□ -1.31
RFC3-202ENST00000434425 NBPF4Q96M43 638 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 PDGFDQ9GZP0 370 aaPredicted RBP6.85□□□□□ -1.31
RFC3-202ENST00000434425 RSPH9Q9H1X1 276 aaPredicted RBP6.85□□□□□ -1.31
RFC3-202ENST00000434425 BCL2L12Q9HB09 334 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 SPC25Q9HBM1 224 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 LIMD1Q9UGP4 676 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 ACEP12821 1306 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 SYNRGQ9UMZ2 1314 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 SMAPO00193 183 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 VIL1P09327 827 aaKnown RBP6.85□□□□□ -1.31
RFC3-202ENST00000434425 UVSSAQ2YD98 709 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 SPIRE2Q8WWL2 714 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 PAGR1Q9BTK6 254 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 PIF1Q9H611 641 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 COL4A3BPQ9Y5P4 624 aa6.85□□□□□ -1.31
RFC3-202ENST00000434425 EIF3AQ14152 1382 aaKnown RBP6.85□□□□□ -1.31
RFC3-202ENST00000434425 SSH2Q76I76 1423 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms