RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 EIF6P56537 245 aaKnown RBP29.41■■■□□ 2.3
HOMER3-203ENST00000433218 GNAI1P63096 354 aa29.41■■■□□ 2.3
HOMER3-203ENST00000433218 CREBZFQ9NS37 354 aa29.41■■■□□ 2.3
HOMER3-203ENST00000433218 EPS15P42566 896 aa29.4■■■□□ 2.3
HOMER3-203ENST00000433218 NIM1KQ8IY84 436 aa29.4■■■□□ 2.3
HOMER3-203ENST00000433218 CELF1Q92879 486 aaKnown RBP29.4■■■□□ 2.3
HOMER3-203ENST00000433218 FMR1Q06787 632 aaKnown RBP eCLIP29.39■■■□□ 2.3
HOMER3-203ENST00000433218 DDX46Q7L014 1031 aaKnown RBP29.39■■■□□ 2.3
HOMER3-203ENST00000433218 RTFDC1Q9BY42 306 aaPredicted RBP29.39■■■□□ 2.3
HOMER3-203ENST00000433218 CLEC11AQ9Y240 323 aa29.39■■■□□ 2.3
HOMER3-203ENST00000433218 COL13A1Q5TAT6 717 aaPredicted RBP29.37■■■□□ 2.29
HOMER3-203ENST00000433218 DPP8Q6V1X1 898 aaPredicted RBP29.37■■■□□ 2.29
HOMER3-203ENST00000433218 SP8Q8IXZ3 490 aa29.37■■■□□ 2.29
HOMER3-203ENST00000433218 PSME4Q14997 1843 aa29.37■■■□□ 2.29
HOMER3-203ENST00000433218 HSPA1AP0DMV8 641 aaKnown RBP29.37■■■□□ 2.29
HOMER3-203ENST00000433218 HSPA1BP0DMV9 641 aaKnown RBP29.37■■■□□ 2.29
HOMER3-203ENST00000433218 GRIPAP1Q4V328 841 aa29.37■■■□□ 2.29
HOMER3-203ENST00000433218 JARID2Q92833 1246 aaPredicted RBP29.37■■■□□ 2.29
HOMER3-203ENST00000433218 CNTNAP1P78357 1384 aa29.36■■■□□ 2.29
HOMER3-203ENST00000433218 MPNDQ8N594 471 aa29.36■■■□□ 2.29
HOMER3-203ENST00000433218 MYD88Q99836 296 aa29.36■■■□□ 2.29
HOMER3-203ENST00000433218 CACNA1FO60840 1977 aa29.35■■■□□ 2.29
HOMER3-203ENST00000433218 POLR2AP24928 1970 aaKnown RBP29.35■■■□□ 2.29
HOMER3-203ENST00000433218 BBOX1O75936 387 aa29.35■■■□□ 2.29
HOMER3-203ENST00000433218 CXCL9Q07325 125 aa29.35■■■□□ 2.29
HOMER3-203ENST00000433218 RIC3Q7Z5B4 369 aa29.35■■■□□ 2.29
HOMER3-203ENST00000433218 ZNF646O15015 1829 aaPredicted RBP29.34■■■□□ 2.29
HOMER3-203ENST00000433218 YDJCA8MPS7 323 aa29.34■■■□□ 2.29
HOMER3-203ENST00000433218 IRS4O14654 1257 aaPredicted RBP29.34■■■□□ 2.29
HOMER3-203ENST00000433218 GOLGA2Q08379 1002 aa29.34■■■□□ 2.29
HOMER3-203ENST00000433218 THSD7BQ9C0I4 1608 aa29.33■■■□□ 2.29
HOMER3-203ENST00000433218 KIAA2012Q0VF49 1180 aa29.33■■■□□ 2.29
HOMER3-203ENST00000433218 SF3B3Q15393 1217 aaKnown RBP29.33■■■□□ 2.29
HOMER3-203ENST00000433218 GPR101Q96P66 508 aaPredicted RBP29.33■■■□□ 2.29
HOMER3-203ENST00000433218 SHTN1A0MZ66 631 aa29.32■■■□□ 2.28
HOMER3-203ENST00000433218 CALD1Q05682 793 aaKnown RBP29.32■■■□□ 2.28
HOMER3-203ENST00000433218 PNMA8AQ86V59 439 aaPredicted RBP29.32■■■□□ 2.28
HOMER3-203ENST00000433218 CNTROBQ8N137 903 aa29.32■■■□□ 2.28
HOMER3-203ENST00000433218 RAD17O75943 681 aa29.31■■■□□ 2.28
HOMER3-203ENST00000433218 LMOD1P29536 600 aaPredicted RBP29.31■■■□□ 2.28
HOMER3-203ENST00000433218 TRIM28Q13263 835 aaKnown RBP29.3■■■□□ 2.28
HOMER3-203ENST00000433218 DIEXFQ68CQ4 756 aaKnown RBP29.3■■■□□ 2.28
HOMER3-203ENST00000433218 SEC31BQ9NQW1 1179 aa29.3■■■□□ 2.28
HOMER3-203ENST00000433218 ZNRF3Q9ULT6 936 aa29.3■■■□□ 2.28
HOMER3-203ENST00000433218 GMPSP49915 693 aaPredicted RBP29.29■■■□□ 2.28
HOMER3-203ENST00000433218 WWC1Q8IX03 1113 aa29.29■■■□□ 2.28
HOMER3-203ENST00000433218 TMX4Q9H1E5 349 aaPredicted RBP29.29■■■□□ 2.28
HOMER3-203ENST00000433218 GPRC5DQ9NZD1 345 aa29.29■■■□□ 2.28
HOMER3-203ENST00000433218 A0A1B0GUL6 1792 aa29.29■■■□□ 2.28
HOMER3-203ENST00000433218 TMEM88BA6NKF7 163 aa29.28■■■□□ 2.28
HOMER3-203ENST00000433218 GPSM2P81274 684 aa29.28■■■□□ 2.28
HOMER3-203ENST00000433218 SUPT20HQ8NEM7 779 aa29.28■■■□□ 2.28
HOMER3-203ENST00000433218 CCDC85AQ96PX6 553 aaPredicted RBP29.28■■■□□ 2.28
HOMER3-203ENST00000433218 TRAF5O00463 557 aa29.28■■■□□ 2.28
HOMER3-203ENST00000433218 ZBTB38Q8NAP3 1195 aaPredicted RBP29.28■■■□□ 2.28
HOMER3-203ENST00000433218 POLLQ9UGP5 575 aa29.28■■■□□ 2.28
HOMER3-203ENST00000433218 G2E3Q7L622 706 aa29.27■■■□□ 2.28
HOMER3-203ENST00000433218 MRS2Q9HD23 443 aa29.27■■■□□ 2.28
HOMER3-203ENST00000433218 VEGFBP49765 207 aa29.26■■■□□ 2.27
HOMER3-203ENST00000433218 VPS33BQ9H267 617 aa29.26■■■□□ 2.27
HOMER3-203ENST00000433218 DBNDD1Q9H9R9 158 aa29.26■■■□□ 2.27
HOMER3-203ENST00000433218 MAP3K2Q9Y2U5 619 aa29.26■■■□□ 2.27
HOMER3-203ENST00000433218 CCDC30Q5VVM6 783 aa29.25■■■□□ 2.27
HOMER3-203ENST00000433218 METTL22Q9BUU2 404 aaPredicted RBP29.25■■■□□ 2.27
HOMER3-203ENST00000433218 NSFL1CQ9UNZ2 370 aaKnown RBP29.25■■■□□ 2.27
HOMER3-203ENST00000433218 IGKV5-2P06315 115 aa29.24■■■□□ 2.27
HOMER3-203ENST00000433218 CCDC27Q2M243 656 aa29.24■■■□□ 2.27
HOMER3-203ENST00000433218 CIAPIN1Q6FI81 312 aa29.24■■■□□ 2.27
HOMER3-203ENST00000433218 TRPM4Q8TD43 1214 aa29.24■■■□□ 2.27
HOMER3-203ENST00000433218 RIMBP2O15034 1052 aa29.23■■■□□ 2.27
HOMER3-203ENST00000433218 SALL2Q9Y467 1007 aaPredicted RBP29.23■■■□□ 2.27
HOMER3-203ENST00000433218 RTL9Q8NET4 1388 aa29.23■■■□□ 2.27
HOMER3-203ENST00000433218 PCCAP05165 728 aaPredicted RBP29.22■■■□□ 2.27
HOMER3-203ENST00000433218 TMC4Q7Z404 712 aa29.22■■■□□ 2.27
HOMER3-203ENST00000433218 CCDC191Q8NCU4 936 aa29.22■■■□□ 2.27
HOMER3-203ENST00000433218 KCNQ5Q9NR82 932 aa29.22■■■□□ 2.27
HOMER3-203ENST00000433218 CWC25Q9NXE8 425 aaPredicted RBP29.22■■■□□ 2.27
HOMER3-203ENST00000433218 ZBTB12Q9Y330 459 aaPredicted RBP29.22■■■□□ 2.27
HOMER3-203ENST00000433218 FANCIQ9NVI1 1328 aa29.22■■■□□ 2.27
HOMER3-203ENST00000433218 PI4KAP2A4QPH2 592 aa29.21■■■□□ 2.27
HOMER3-203ENST00000433218 USP50Q70EL3 339 aaPredicted RBP29.21■■■□□ 2.27
HOMER3-203ENST00000433218 PI4KAP1Q8N8J0 262 aa29.21■■■□□ 2.27
HOMER3-203ENST00000433218 ADARB2Q9NS39 739 aaKnown RBP29.21■■■□□ 2.27
HOMER3-203ENST00000433218 HIRAP54198 1017 aaPredicted RBP29.2■■■□□ 2.27
HOMER3-203ENST00000433218 CWF19L2Q2TBE0 894 aaKnown RBP29.2■■■□□ 2.27
HOMER3-203ENST00000433218 TWISTNBQ3B726 338 aaPredicted RBP29.2■■■□□ 2.27
HOMER3-203ENST00000433218 RASSF10A6NK89 507 aa29.19■■■□□ 2.26
HOMER3-203ENST00000433218 C6orf229H3BNL8 230 aa29.19■■■□□ 2.26
HOMER3-203ENST00000433218 PSMD14O00487 310 aa29.19■■■□□ 2.26
HOMER3-203ENST00000433218 FOXN1O15353 648 aa29.19■■■□□ 2.26
HOMER3-203ENST00000433218 RPS8P62241 208 aaKnown RBP29.19■■■□□ 2.26
HOMER3-203ENST00000433218 DOK7Q18PE1 504 aa29.19■■■□□ 2.26
HOMER3-203ENST00000433218 WASHC4Q2M389 1173 aa29.19■■■□□ 2.26
HOMER3-203ENST00000433218 TBC1D16Q8TBP0 767 aa29.19■■■□□ 2.26
HOMER3-203ENST00000433218 EGFRP00533 1210 aa29.18■■■□□ 2.26
HOMER3-203ENST00000433218 CST9Q5W186 159 aa29.18■■■□□ 2.26
HOMER3-203ENST00000433218 BCL2L13Q9BXK5 485 aa29.18■■■□□ 2.26
HOMER3-203ENST00000433218 ECE2O60344 883 aa29.17■■■□□ 2.26
HOMER3-203ENST00000433218 PDE8AO60658 829 aa29.17■■■□□ 2.26
HOMER3-203ENST00000433218 DDX58O95786 925 aaKnown RBP29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms