RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 MCM2P49736 904 aa9.72□□□□□ -0.85
VTI1A-202ENST00000432306 UVSSAQ2YD98 709 aa9.72□□□□□ -0.85
VTI1A-202ENST00000432306 NAALADL2Q58DX5 795 aa9.72□□□□□ -0.85
VTI1A-202ENST00000432306 FAM184AQ8NB25 1140 aa9.72□□□□□ -0.85
VTI1A-202ENST00000432306 MYRIPQ8NFW9 859 aa9.72□□□□□ -0.85
VTI1A-202ENST00000432306 CCDC102AQ96A19 550 aa9.72□□□□□ -0.85
VTI1A-202ENST00000432306 INTS4Q96HW7 963 aaKnown RBP9.72□□□□□ -0.85
VTI1A-202ENST00000432306 VRTNQ9H8Y1 702 aa9.72□□□□□ -0.85
VTI1A-202ENST00000432306 ATP10DQ9P241 1426 aa9.71□□□□□ -0.85
VTI1A-202ENST00000432306 FYB1O15117 783 aa9.71□□□□□ -0.85
VTI1A-202ENST00000432306 GPR37O15354 613 aa9.71□□□□□ -0.85
VTI1A-202ENST00000432306 DIAPH1O60610 1272 aaKnown RBP9.71□□□□□ -0.85
VTI1A-202ENST00000432306 TRIM37O94972 964 aa9.71□□□□□ -0.85
VTI1A-202ENST00000432306 APBA3O96018 575 aa9.71□□□□□ -0.85
VTI1A-202ENST00000432306 HMGN5P82970 282 aaKnown RBP9.71□□□□□ -0.85
VTI1A-202ENST00000432306 CUL4AQ13619 759 aa9.71□□□□□ -0.85
VTI1A-202ENST00000432306 TMEM132EQ6IEE7 984 aa9.71□□□□□ -0.85
VTI1A-202ENST00000432306 DNAJC14Q6Y2X3 702 aaPredicted RBP9.71□□□□□ -0.85
VTI1A-202ENST00000432306 CCDC94Q9BW85 323 aaPredicted RBP9.71□□□□□ -0.85
VTI1A-202ENST00000432306 OSBPL3Q9H4L5 887 aa9.71□□□□□ -0.85
VTI1A-202ENST00000432306 SPON1Q9HCB6 807 aa9.71□□□□□ -0.85
VTI1A-202ENST00000432306 TMEM63CQ9P1W3 806 aa9.71□□□□□ -0.85
VTI1A-202ENST00000432306 ANKARQ7Z5J8 1434 aa9.71□□□□□ -0.86
VTI1A-202ENST00000432306 CRYBG1Q9Y4K1 1723 aa9.71□□□□□ -0.86
VTI1A-202ENST00000432306 CHD4Q14839 1912 aa9.71□□□□□ -0.86
VTI1A-202ENST00000432306 GNAI1P63096 354 aa9.7□□□□□ -0.86
VTI1A-202ENST00000432306 DPH6Q7L8W6 267 aa9.7□□□□□ -0.86
VTI1A-202ENST00000432306 NOP9Q86U38 636 aaKnown RBP9.7□□□□□ -0.86
VTI1A-202ENST00000432306 RPAP2Q8IXW5 612 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-202ENST00000432306 CDCA7Q9BWT1 371 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-202ENST00000432306 CARNS1A5YM72 827 aa9.7□□□□□ -0.86
VTI1A-202ENST00000432306 REC8O95072 547 aa9.7□□□□□ -0.86
VTI1A-202ENST00000432306 FOSBP53539 338 aa9.7□□□□□ -0.86
VTI1A-202ENST00000432306 RBM46Q8TBY0 533 aaKnown RBP9.7□□□□□ -0.86
VTI1A-202ENST00000432306 FAM13BQ9NYF5 915 aa9.7□□□□□ -0.86
VTI1A-202ENST00000432306 KCNQ2O43526 872 aa9.69□□□□□ -0.86
VTI1A-202ENST00000432306 NFE2L2Q16236 605 aa9.69□□□□□ -0.86
VTI1A-202ENST00000432306 NME8Q8N427 588 aa9.69□□□□□ -0.86
VTI1A-202ENST00000432306 ANKRD44Q8N8A2 993 aa9.69□□□□□ -0.86
VTI1A-202ENST00000432306 TMEM87AQ8NBN3 555 aa9.69□□□□□ -0.86
VTI1A-202ENST00000432306 PIBF1Q8WXW3 757 aa9.69□□□□□ -0.86
VTI1A-202ENST00000432306 GLMNQ92990 594 aa9.69□□□□□ -0.86
VTI1A-202ENST00000432306 PRDM11Q9NQV5 511 aa9.69□□□□□ -0.86
VTI1A-202ENST00000432306 SPTLC3Q9NUV7 552 aa9.69□□□□□ -0.86
VTI1A-202ENST00000432306 RTL1A6NKG5 1358 aa9.68□□□□□ -0.86
VTI1A-202ENST00000432306 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.68□□□□□ -0.86
VTI1A-202ENST00000432306 U2SURPO15042 1029 aaKnown RBP9.68□□□□□ -0.86
VTI1A-202ENST00000432306 PRPF40AO75400 957 aaKnown RBP9.68□□□□□ -0.86
VTI1A-202ENST00000432306 OSBPP22059 807 aa9.68□□□□□ -0.86
VTI1A-202ENST00000432306 DMTNQ08495 405 aa9.68□□□□□ -0.86
VTI1A-202ENST00000432306 KIAA2012Q0VF49 1180 aa9.68□□□□□ -0.86
VTI1A-202ENST00000432306 MAP2K5Q13163 448 aa9.68□□□□□ -0.86
VTI1A-202ENST00000432306 PKP1Q13835 747 aa9.68□□□□□ -0.86
VTI1A-202ENST00000432306 CASC1Q6TDU7 716 aa9.68□□□□□ -0.86
VTI1A-202ENST00000432306 PTCD2Q8WV60 388 aaKnown RBP9.68□□□□□ -0.86
VTI1A-202ENST00000432306 DDX12PQ92771 950 aa9.68□□□□□ -0.86
VTI1A-202ENST00000432306 SYAP1Q96A49 352 aaPredicted RBP9.68□□□□□ -0.86
VTI1A-202ENST00000432306 SSH2Q76I76 1423 aa9.68□□□□□ -0.86
VTI1A-202ENST00000432306 SPATA31A1Q5TZJ5 1347 aa9.68□□□□□ -0.86
VTI1A-202ENST00000432306 EVI5O60447 810 aa9.68□□□□□ -0.86
VTI1A-202ENST00000432306 PHF14O94880 888 aa9.68□□□□□ -0.86
VTI1A-202ENST00000432306 VAMP1P23763 118 aa9.68□□□□□ -0.86
VTI1A-202ENST00000432306 PTGER2P43116 358 aa9.68□□□□□ -0.86
VTI1A-202ENST00000432306 RBM10P98175 930 aaKnown RBP9.68□□□□□ -0.86
VTI1A-202ENST00000432306 TMA7Q9Y2S6 64 aaKnown RBP9.68□□□□□ -0.86
VTI1A-202ENST00000432306 CAMTA1Q9Y6Y1 1673 aa9.67□□□□□ -0.86
VTI1A-202ENST00000432306 AATKQ6ZMQ8 1374 aa9.67□□□□□ -0.86
VTI1A-202ENST00000432306 RGPD3A6NKT7 1758 aaPredicted RBP9.67□□□□□ -0.86
VTI1A-202ENST00000432306 RGPD4Q7Z3J3 1758 aa9.67□□□□□ -0.86
VTI1A-202ENST00000432306 KIF20AO95235 890 aa9.67□□□□□ -0.86
VTI1A-202ENST00000432306 ZSCAN20P17040 1043 aaPredicted RBP9.67□□□□□ -0.86
VTI1A-202ENST00000432306 LMOD3Q0VAK6 560 aa9.67□□□□□ -0.86
VTI1A-202ENST00000432306 FOXD4L6Q3SYB3 417 aaPredicted RBP9.67□□□□□ -0.86
VTI1A-202ENST00000432306 FOXD4L3Q6VB84 417 aaPredicted RBP9.67□□□□□ -0.86
VTI1A-202ENST00000432306 GTPBP4Q9BZE4 634 aaKnown RBP9.67□□□□□ -0.86
VTI1A-202ENST00000432306 ATP7BP35670 1465 aa9.67□□□□□ -0.86
VTI1A-202ENST00000432306 IRF6O14896 467 aa9.66□□□□□ -0.86
VTI1A-202ENST00000432306 SRPK2P78362 688 aaKnown RBP9.66□□□□□ -0.86
VTI1A-202ENST00000432306 ZGPATQ8N5A5 531 aaKnown RBP9.66□□□□□ -0.86
VTI1A-202ENST00000432306 TSPY26PQ9H489 355 aa9.66□□□□□ -0.86
VTI1A-202ENST00000432306 DLC1Q96QB1 1528 aa9.66□□□□□ -0.86
VTI1A-202ENST00000432306 ITSN1Q15811 1721 aa9.65□□□□□ -0.86
VTI1A-202ENST00000432306 SYCE3A1L190 88 aa9.65□□□□□ -0.86
VTI1A-202ENST00000432306 ERC2O15083 957 aa9.65□□□□□ -0.86
VTI1A-202ENST00000432306 PEX14O75381 377 aa9.65□□□□□ -0.86
VTI1A-202ENST00000432306 EIF3JO75822 258 aaKnown RBP9.65□□□□□ -0.86
VTI1A-202ENST00000432306 LETM1O95202 739 aaPredicted RBP9.65□□□□□ -0.86
VTI1A-202ENST00000432306 SLC34A2O95436 690 aa9.65□□□□□ -0.86
VTI1A-202ENST00000432306 MAP4K4O95819 1239 aaPredicted RBP9.65□□□□□ -0.86
VTI1A-202ENST00000432306 SDSP20132 328 aa9.65□□□□□ -0.86
VTI1A-202ENST00000432306 FKBP5Q13451 457 aaPredicted RBP9.65□□□□□ -0.86
VTI1A-202ENST00000432306 PRAM1Q96QH2 718 aa9.65□□□□□ -0.86
VTI1A-202ENST00000432306 GGNBP2Q9H3C7 697 aa9.65□□□□□ -0.86
VTI1A-202ENST00000432306 KIAA0232Q92628 1395 aa9.65□□□□□ -0.86
VTI1A-202ENST00000432306 PHRF1Q9P1Y6 1649 aaKnown RBP9.65□□□□□ -0.86
VTI1A-202ENST00000432306 KIF20BQ96Q89 1820 aa9.65□□□□□ -0.87
VTI1A-202ENST00000432306 PTMAP06454 111 aaKnown RBP9.65□□□□□ -0.87
VTI1A-202ENST00000432306 SAFB2Q14151 953 aaKnown RBP eCLIP9.65□□□□□ -0.87
VTI1A-202ENST00000432306 TTLL12Q14166 644 aaPredicted RBP9.65□□□□□ -0.87
VTI1A-202ENST00000432306 LONRF3Q496Y0 759 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms