RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 NEXNQ0ZGT2 675 aa13.72□□□□□ -0.21
ATG4B-210ENST00000428861 GCKRQ14397 625 aa13.72□□□□□ -0.21
ATG4B-210ENST00000428861 BEND3Q5T5X7 828 aa13.72□□□□□ -0.21
ATG4B-210ENST00000428861 BCL2L13Q9BXK5 485 aa13.72□□□□□ -0.21
ATG4B-210ENST00000428861 CDHR2Q9BYE9 1310 aa13.71□□□□□ -0.21
ATG4B-210ENST00000428861 CACNA1FO60840 1977 aa13.71□□□□□ -0.21
ATG4B-210ENST00000428861 TIAM2Q8IVF5 1701 aa13.71□□□□□ -0.21
ATG4B-210ENST00000428861 PDE8AO60658 829 aa13.71□□□□□ -0.21
ATG4B-210ENST00000428861 BBOX1O75936 387 aa13.71□□□□□ -0.21
ATG4B-210ENST00000428861 CC2D2BQ6DHV5 1058 aa13.71□□□□□ -0.21
ATG4B-210ENST00000428861 SP8Q8IXZ3 490 aa13.71□□□□□ -0.21
ATG4B-210ENST00000428861 LINS1Q8NG48 757 aa13.71□□□□□ -0.21
ATG4B-210ENST00000428861 PSMD1Q99460 953 aa13.71□□□□□ -0.21
ATG4B-210ENST00000428861 ZC3H4Q9UPT8 1303 aaKnown RBP13.7□□□□□ -0.22
ATG4B-210ENST00000428861 GLTPD2A6NH11 291 aa13.7□□□□□ -0.22
ATG4B-210ENST00000428861 POTECB2RU33 542 aa13.7□□□□□ -0.22
ATG4B-210ENST00000428861 IARSP41252 1262 aaKnown RBP13.7□□□□□ -0.22
ATG4B-210ENST00000428861 C1QTNF8P60827 252 aa13.7□□□□□ -0.22
ATG4B-210ENST00000428861 UBE3BQ7Z3V4 1068 aa13.7□□□□□ -0.22
ATG4B-210ENST00000428861 RRAGCQ9HB90 399 aa13.7□□□□□ -0.22
ATG4B-210ENST00000428861 DICER1Q9UPY3 1922 aaKnown RBP13.7□□□□□ -0.22
ATG4B-210ENST00000428861 CTSWP56202 376 aa13.69□□□□□ -0.22
ATG4B-210ENST00000428861 HNRNPUQ00839 825 aaKnown RBP eCLIP13.69□□□□□ -0.22
ATG4B-210ENST00000428861 TTLL11Q8NHH1 800 aa13.69□□□□□ -0.22
ATG4B-210ENST00000428861 ZNF541Q9H0D2 1346 aa13.68□□□□□ -0.22
ATG4B-210ENST00000428861 DDNO94850 711 aaPredicted RBP13.68□□□□□ -0.22
ATG4B-210ENST00000428861 RPS8P62241 208 aaKnown RBP13.68□□□□□ -0.22
ATG4B-210ENST00000428861 RTFDC1Q9BY42 306 aaPredicted RBP13.68□□□□□ -0.22
ATG4B-210ENST00000428861 GREM2Q9H772 168 aa13.68□□□□□ -0.22
ATG4B-210ENST00000428861 KDM2BQ8NHM5 1336 aa13.67□□□□□ -0.22
ATG4B-210ENST00000428861 DUOX1Q9NRD9 1551 aa13.67□□□□□ -0.22
ATG4B-210ENST00000428861 FZD9O00144 591 aa13.67□□□□□ -0.22
ATG4B-210ENST00000428861 GPSM2P81274 684 aa13.67□□□□□ -0.22
ATG4B-210ENST00000428861 CCDC152Q4G0S7 254 aa13.67□□□□□ -0.22
ATG4B-210ENST00000428861 EPHA10Q5JZY3 1008 aa13.67□□□□□ -0.22
ATG4B-210ENST00000428861 SLC4A10Q6U841 1118 aa13.67□□□□□ -0.22
ATG4B-210ENST00000428861 MPNDQ8N594 471 aa13.67□□□□□ -0.22
ATG4B-210ENST00000428861 PLA2G12BQ9BX93 195 aa13.67□□□□□ -0.22
ATG4B-210ENST00000428861 AOC3Q16853 763 aa13.66□□□□□ -0.22
ATG4B-210ENST00000428861 ALDH1L2Q3SY69 923 aa13.66□□□□□ -0.22
ATG4B-210ENST00000428861 GRIPAP1Q4V328 841 aa13.66□□□□□ -0.22
ATG4B-210ENST00000428861 DPP8Q6V1X1 898 aaPredicted RBP13.66□□□□□ -0.22
ATG4B-210ENST00000428861 LRRC37AA6NMS7 1700 aa13.66□□□□□ -0.22
ATG4B-210ENST00000428861 WTIPA6NIX2 430 aaPredicted RBP13.65□□□□□ -0.22
ATG4B-210ENST00000428861 CSF1RP07333 972 aa13.65□□□□□ -0.22
ATG4B-210ENST00000428861 HSP90B1P14625 803 aaKnown RBP13.65□□□□□ -0.22
ATG4B-210ENST00000428861 FOXO4P98177 505 aa13.65□□□□□ -0.22
ATG4B-210ENST00000428861 FAM161AQ3B820 660 aa13.65□□□□□ -0.22
ATG4B-210ENST00000428861 TMC4Q7Z404 712 aa13.65□□□□□ -0.22
ATG4B-210ENST00000428861 LARGE2Q8N3Y3 721 aa13.65□□□□□ -0.22
ATG4B-210ENST00000428861 GPR101Q96P66 508 aaPredicted RBP13.65□□□□□ -0.22
ATG4B-210ENST00000428861 SMC4Q9NTJ3 1288 aa13.65□□□□□ -0.22
ATG4B-210ENST00000428861 POLLQ9UGP5 575 aa13.65□□□□□ -0.22
ATG4B-210ENST00000428861 PTPRCP08575 1304 aa13.64□□□□□ -0.23
ATG4B-210ENST00000428861 GRM8O00222 908 aa13.64□□□□□ -0.23
ATG4B-210ENST00000428861 PPIP5K2O43314 1243 aa13.64□□□□□ -0.23
ATG4B-210ENST00000428861 ALDH1L1O75891 902 aa13.64□□□□□ -0.23
ATG4B-210ENST00000428861 CT47B1P0C2W7 299 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-210ENST00000428861 RARSP54136 660 aaKnown RBP13.64□□□□□ -0.23
ATG4B-210ENST00000428861 DPY19L2Q6NUT2 758 aa13.64□□□□□ -0.23
ATG4B-210ENST00000428861 KAZALD1Q96I82 304 aa13.64□□□□□ -0.23
ATG4B-210ENST00000428861 SRCIN1Q9C0H9 1055 aa13.64□□□□□ -0.23
ATG4B-210ENST00000428861 NOB1Q9ULX3 412 aaKnown RBP13.64□□□□□ -0.23
ATG4B-210ENST00000428861 NSFL1CQ9UNZ2 370 aaKnown RBP13.64□□□□□ -0.23
ATG4B-210ENST00000428861 LTBP1Q14766 1721 aa13.64□□□□□ -0.23
ATG4B-210ENST00000428861 WDR90Q96KV7 1748 aa13.64□□□□□ -0.23
ATG4B-210ENST00000428861 RTL9Q8NET4 1388 aa13.63□□□□□ -0.23
ATG4B-210ENST00000428861 NBPF7P0C2Y1 421 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-210ENST00000428861 KIAA2012Q0VF49 1180 aa13.63□□□□□ -0.23
ATG4B-210ENST00000428861 TMX4Q9H1E5 349 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-210ENST00000428861 YDJCA8MPS7 323 aa13.62□□□□□ -0.23
ATG4B-210ENST00000428861 TOMM70O94826 608 aa13.62□□□□□ -0.23
ATG4B-210ENST00000428861 VEGFAP15692 232 aaPredicted RBP13.62□□□□□ -0.23
ATG4B-210ENST00000428861 ITGA6P23229 1130 aa13.62□□□□□ -0.23
ATG4B-210ENST00000428861 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
ATG4B-210ENST00000428861 ANKRD18AQ8IVF6 992 aa13.62□□□□□ -0.23
ATG4B-210ENST00000428861 TBC1D16Q8TBP0 767 aa13.62□□□□□ -0.23
ATG4B-210ENST00000428861 JDP2Q8WYK2 163 aa13.62□□□□□ -0.23
ATG4B-210ENST00000428861 SUCLG2Q96I99 432 aa13.62□□□□□ -0.23
ATG4B-210ENST00000428861 MYH3P11055 1940 aa13.62□□□□□ -0.23
ATG4B-210ENST00000428861 UTYO14607 1347 aa13.62□□□□□ -0.23
ATG4B-210ENST00000428861 RIMBP2O15034 1052 aa13.61□□□□□ -0.23
ATG4B-210ENST00000428861 BCAR3O75815 825 aa13.61□□□□□ -0.23
ATG4B-210ENST00000428861 POTEIP0CG38 1075 aa13.61□□□□□ -0.23
ATG4B-210ENST00000428861 POTEJP0CG39 1038 aa13.61□□□□□ -0.23
ATG4B-210ENST00000428861 NIM1KQ8IY84 436 aa13.61□□□□□ -0.23
ATG4B-210ENST00000428861 SUPT20HQ8NEM7 779 aa13.61□□□□□ -0.23
ATG4B-210ENST00000428861 L3MBTL3Q96JM7 780 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-210ENST00000428861 CDC5LQ99459 802 aaKnown RBP13.61□□□□□ -0.23
ATG4B-210ENST00000428861 PODXL2Q9NZ53 605 aa13.61□□□□□ -0.23
ATG4B-210ENST00000428861 C9orf78Q9NZ63 289 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-210ENST00000428861 MINPP1Q9UNW1 487 aa13.61□□□□□ -0.23
ATG4B-210ENST00000428861 TNNQ9UQP3 1299 aa13.61□□□□□ -0.23
ATG4B-210ENST00000428861 ZBED9Q6R2W3 1325 aa13.61□□□□□ -0.23
ATG4B-210ENST00000428861 C6orf229H3BNL8 230 aa13.6□□□□□ -0.23
ATG4B-210ENST00000428861 CXCL9Q07325 125 aa13.6□□□□□ -0.23
ATG4B-210ENST00000428861 LMBR1LQ6UX01 489 aa13.6□□□□□ -0.23
ATG4B-210ENST00000428861 USP44Q9H0E7 712 aa13.6□□□□□ -0.23
ATG4B-210ENST00000428861 VPS33BQ9H267 617 aa13.6□□□□□ -0.23
ATG4B-210ENST00000428861 BSDC1Q9NW68 430 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms