RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 FAM161AQ3B820 660 aa13.47□□□□□ -0.25
CRIM1-204ENST00000428774 KLHDC4Q8TBB5 520 aa13.47□□□□□ -0.25
CRIM1-204ENST00000428774 CHMP3Q9Y3E7 222 aa13.47□□□□□ -0.25
CRIM1-204ENST00000428774 APBB1O00213 710 aa13.46□□□□□ -0.25
CRIM1-204ENST00000428774 SMARCA5O60264 1052 aaPredicted RBP13.46□□□□□ -0.25
CRIM1-204ENST00000428774 SURF6O75683 361 aaKnown RBP13.46□□□□□ -0.25
CRIM1-204ENST00000428774 CSF1RP07333 972 aa13.46□□□□□ -0.25
CRIM1-204ENST00000428774 HCLS1P14317 486 aaPredicted RBP13.46□□□□□ -0.25
CRIM1-204ENST00000428774 PTGER2P43116 358 aa13.46□□□□□ -0.25
CRIM1-204ENST00000428774 ERFEQ4G0M1 354 aa13.46□□□□□ -0.25
CRIM1-204ENST00000428774 ANKRD45Q5TZF3 282 aa13.46□□□□□ -0.25
CRIM1-204ENST00000428774 CHD1LQ86WJ1 897 aa13.46□□□□□ -0.25
CRIM1-204ENST00000428774 SETDB2Q96T68 719 aa13.46□□□□□ -0.25
CRIM1-204ENST00000428774 SGIP1Q9BQI5 828 aa13.46□□□□□ -0.25
CRIM1-204ENST00000428774 LNPKQ9C0E8 428 aa13.46□□□□□ -0.25
CRIM1-204ENST00000428774 MTFR1LQ9H019 292 aa13.46□□□□□ -0.25
CRIM1-204ENST00000428774 NOP58Q9Y2X3 529 aaKnown RBP13.46□□□□□ -0.25
CRIM1-204ENST00000428774 KIAA1551Q9HCM1 1747 aa13.46□□□□□ -0.25
CRIM1-204ENST00000428774 MMP10P09238 476 aa13.45□□□□□ -0.26
CRIM1-204ENST00000428774 RGS3P49796 1198 aa13.45□□□□□ -0.26
CRIM1-204ENST00000428774 PTPN12Q05209 780 aaKnown RBP13.45□□□□□ -0.26
CRIM1-204ENST00000428774 NBPF5PQ86XG9 351 aaPredicted RBP13.45□□□□□ -0.26
CRIM1-204ENST00000428774 TTLL11Q8NHH1 800 aa13.45□□□□□ -0.26
CRIM1-204ENST00000428774 CCDC85AQ96PX6 553 aaPredicted RBP13.45□□□□□ -0.26
CRIM1-204ENST00000428774 NYXQ9GZU5 481 aa13.45□□□□□ -0.26
CRIM1-204ENST00000428774 COPRSQ9NQ92 184 aa13.45□□□□□ -0.26
CRIM1-204ENST00000428774 RTL9Q8NET4 1388 aa13.45□□□□□ -0.26
CRIM1-204ENST00000428774 KIF13BQ9NQT8 1826 aa13.44□□□□□ -0.26
CRIM1-204ENST00000428774 POLRMTO00411 1230 aaKnown RBP13.44□□□□□ -0.26
CRIM1-204ENST00000428774 TM4SF1P30408 202 aa13.44□□□□□ -0.26
CRIM1-204ENST00000428774 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
CRIM1-204ENST00000428774 CCDC24Q8N4L8 307 aa13.44□□□□□ -0.26
CRIM1-204ENST00000428774 SLC16A10Q8TF71 515 aa13.44□□□□□ -0.26
CRIM1-204ENST00000428774 GREM2Q9H772 168 aa13.44□□□□□ -0.26
CRIM1-204ENST00000428774 CACNA1SQ13698 1873 aa13.44□□□□□ -0.26
CRIM1-204ENST00000428774 LRRC37AA6NMS7 1700 aa13.43□□□□□ -0.26
CRIM1-204ENST00000428774 RAB11FIP3O75154 756 aa13.43□□□□□ -0.26
CRIM1-204ENST00000428774 PRR5LQ6MZQ0 368 aa13.43□□□□□ -0.26
CRIM1-204ENST00000428774 RHPN1Q8TCX5 695 aa13.43□□□□□ -0.26
CRIM1-204ENST00000428774 ZNF594Q96JF6 807 aaPredicted RBP13.43□□□□□ -0.26
CRIM1-204ENST00000428774 LRRCC1Q9C099 1032 aa13.43□□□□□ -0.26
CRIM1-204ENST00000428774 SIL1Q9H173 461 aa13.43□□□□□ -0.26
CRIM1-204ENST00000428774 DLEC1Q9Y238 1755 aa13.43□□□□□ -0.26
CRIM1-204ENST00000428774 ZNF609O15014 1411 aa13.42□□□□□ -0.26
CRIM1-204ENST00000428774 SASH1O94885 1247 aa13.42□□□□□ -0.26
CRIM1-204ENST00000428774 SERPINB2P05120 415 aa13.42□□□□□ -0.26
CRIM1-204ENST00000428774 ITGA6P23229 1130 aa13.42□□□□□ -0.26
CRIM1-204ENST00000428774 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
CRIM1-204ENST00000428774 SLC10A5Q5PT55 438 aa13.42□□□□□ -0.26
CRIM1-204ENST00000428774 CNBD1Q8NA66 436 aa13.42□□□□□ -0.26
CRIM1-204ENST00000428774 OTUD7AQ8TE49 926 aaPredicted RBP13.42□□□□□ -0.26
CRIM1-204ENST00000428774 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.42□□□□□ -0.26
CRIM1-204ENST00000428774 SALL3Q9BXA9 1300 aa13.41□□□□□ -0.26
CRIM1-204ENST00000428774 OS9Q13438 667 aaPredicted RBP13.41□□□□□ -0.26
CRIM1-204ENST00000428774 CCDC57Q2TAC2 916 aa13.41□□□□□ -0.26
CRIM1-204ENST00000428774 NLGN1Q8N2Q7 840 aa13.41□□□□□ -0.26
CRIM1-204ENST00000428774 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
CRIM1-204ENST00000428774 SPON1Q9HCB6 807 aa13.41□□□□□ -0.26
CRIM1-204ENST00000428774 IL1RAPL2Q9NP60 686 aa13.41□□□□□ -0.26
CRIM1-204ENST00000428774 AK9Q5TCS8 1911 aa13.41□□□□□ -0.26
CRIM1-204ENST00000428774 ANKRD18BA2A2Z9 1011 aa13.4□□□□□ -0.26
CRIM1-204ENST00000428774 HSP90B1P14625 803 aaKnown RBP13.4□□□□□ -0.26
CRIM1-204ENST00000428774 GTF2E1P29083 439 aaPredicted RBP13.4□□□□□ -0.26
CRIM1-204ENST00000428774 G3BP1Q13283 466 aaKnown RBP eCLIP13.4□□□□□ -0.26
CRIM1-204ENST00000428774 IFIT5Q13325 482 aaKnown RBP13.4□□□□□ -0.26
CRIM1-204ENST00000428774 SF3B3Q15393 1217 aaKnown RBP13.4□□□□□ -0.26
CRIM1-204ENST00000428774 LRRC24Q50LG9 513 aa13.4□□□□□ -0.26
CRIM1-204ENST00000428774 TPTE2Q6XPS3 522 aa13.4□□□□□ -0.26
CRIM1-204ENST00000428774 ATG9AQ7Z3C6 839 aa13.4□□□□□ -0.26
CRIM1-204ENST00000428774 ERC1Q8IUD2 1116 aa13.4□□□□□ -0.26
CRIM1-204ENST00000428774 C16orf71Q8IYS4 520 aaPredicted RBP13.4□□□□□ -0.26
CRIM1-204ENST00000428774 PUS3Q9BZE2 481 aaKnown RBP13.4□□□□□ -0.26
CRIM1-204ENST00000428774 EYA2O00167 538 aa13.39□□□□□ -0.27
CRIM1-204ENST00000428774 CIAO1O76071 339 aa13.39□□□□□ -0.27
CRIM1-204ENST00000428774 CCDC152Q4G0S7 254 aa13.39□□□□□ -0.27
CRIM1-204ENST00000428774 BCL11AQ9H165 835 aa13.39□□□□□ -0.27
CRIM1-204ENST00000428774 SEC31BQ9NQW1 1179 aa13.39□□□□□ -0.27
CRIM1-204ENST00000428774 ZBTB47Q9UFB7 747 aaPredicted RBP13.39□□□□□ -0.27
CRIM1-204ENST00000428774 PARP3Q9Y6F1 533 aa13.39□□□□□ -0.27
CRIM1-204ENST00000428774 C10orf71Q711Q0 1435 aa13.39□□□□□ -0.27
CRIM1-204ENST00000428774 NPHP1O15259 732 aa13.38□□□□□ -0.27
CRIM1-204ENST00000428774 ST5P78524 1137 aa13.38□□□□□ -0.27
CRIM1-204ENST00000428774 TAF7LQ5H9L4 462 aa13.38□□□□□ -0.27
CRIM1-204ENST00000428774 PLEKHM2Q8IWE5 1019 aa13.38□□□□□ -0.27
CRIM1-204ENST00000428774 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
CRIM1-204ENST00000428774 LTBP1Q14766 1721 aa13.38□□□□□ -0.27
CRIM1-204ENST00000428774 BRCA1P38398 1863 aaKnown RBP13.38□□□□□ -0.27
CRIM1-204ENST00000428774 POLD1P28340 1107 aa13.37□□□□□ -0.27
CRIM1-204ENST00000428774 IL15P40933 162 aaPredicted RBP13.37□□□□□ -0.27
CRIM1-204ENST00000428774 TFCP2Q12800 502 aa13.37□□□□□ -0.27
CRIM1-204ENST00000428774 KLHL34Q8N239 644 aa13.37□□□□□ -0.27
CRIM1-204ENST00000428774 NLRP3Q96P20 1036 aa13.37□□□□□ -0.27
CRIM1-204ENST00000428774 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
CRIM1-204ENST00000428774 TLR7Q9NYK1 1049 aaKnown RBP13.36□□□□□ -0.27
CRIM1-204ENST00000428774 MX1P20591 662 aa13.35□□□□□ -0.27
CRIM1-204ENST00000428774 TNNI3KQ59H18 835 aa13.35□□□□□ -0.27
CRIM1-204ENST00000428774 TSHZ3Q63HK5 1081 aa13.35□□□□□ -0.27
CRIM1-204ENST00000428774 AACSQ86V21 672 aa13.35□□□□□ -0.27
CRIM1-204ENST00000428774 CLASRPQ8N2M8 674 aaKnown RBP13.35□□□□□ -0.27
CRIM1-204ENST00000428774 NLGN2Q8NFZ4 835 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms