RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 DNAAF4Q8WXU2 420 aa23.59■■□□□ 1.37
MSH5-207ENST00000425703 RRAGCQ9HB90 399 aa23.59■■□□□ 1.37
MSH5-207ENST00000425703 LAMB2P55268 1798 aa23.59■■□□□ 1.37
MSH5-207ENST00000425703 CCDC88AQ3V6T2 1871 aa23.59■■□□□ 1.37
MSH5-207ENST00000425703 PDE8AO60658 829 aa23.58■■□□□ 1.37
MSH5-207ENST00000425703 SLFN5Q08AF3 891 aa23.58■■□□□ 1.37
MSH5-207ENST00000425703 RTFDC1Q9BY42 306 aaPredicted RBP23.58■■□□□ 1.37
MSH5-207ENST00000425703 VEGFAP15692 232 aaPredicted RBP23.57■■□□□ 1.36
MSH5-207ENST00000425703 LINS1Q8NG48 757 aa23.57■■□□□ 1.36
MSH5-207ENST00000425703 JDP2Q8WYK2 163 aa23.57■■□□□ 1.36
MSH5-207ENST00000425703 CWF19L2Q2TBE0 894 aaKnown RBP23.56■■□□□ 1.36
MSH5-207ENST00000425703 CCDC152Q4G0S7 254 aa23.56■■□□□ 1.36
MSH5-207ENST00000425703 C16orf71Q8IYS4 520 aaPredicted RBP23.56■■□□□ 1.36
MSH5-207ENST00000425703 SUPT20HQ8NEM7 779 aa23.56■■□□□ 1.36
MSH5-207ENST00000425703 RBM46Q8TBY0 533 aaKnown RBP23.56■■□□□ 1.36
MSH5-207ENST00000425703 FZD9O00144 591 aa23.55■■□□□ 1.36
MSH5-207ENST00000425703 H7C1W4 665 aa23.54■■□□□ 1.36
MSH5-207ENST00000425703 GCKRQ14397 625 aa23.54■■□□□ 1.36
MSH5-207ENST00000425703 DPP8Q6V1X1 898 aaPredicted RBP23.54■■□□□ 1.36
MSH5-207ENST00000425703 TRMT2AQ8IZ69 625 aaKnown RBP23.54■■□□□ 1.36
MSH5-207ENST00000425703 MPNDQ8N594 471 aa23.54■■□□□ 1.36
MSH5-207ENST00000425703 CELF1Q92879 486 aaKnown RBP23.54■■□□□ 1.36
MSH5-207ENST00000425703 WDR90Q96KV7 1748 aa23.53■■□□□ 1.36
MSH5-207ENST00000425703 RPS8P62241 208 aaKnown RBP23.53■■□□□ 1.36
MSH5-207ENST00000425703 SLC51AQ86UW1 340 aa23.53■■□□□ 1.36
MSH5-207ENST00000425703 L3MBTL3Q96JM7 780 aaPredicted RBP23.53■■□□□ 1.36
MSH5-207ENST00000425703 POTECB2RU33 542 aa23.52■■□□□ 1.36
MSH5-207ENST00000425703 DDNO94850 711 aaPredicted RBP23.52■■□□□ 1.36
MSH5-207ENST00000425703 MIER1Q8N108 512 aa23.52■■□□□ 1.36
MSH5-207ENST00000425703 LARGE2Q8N3Y3 721 aa23.52■■□□□ 1.36
MSH5-207ENST00000425703 CTSWP56202 376 aa23.51■■□□□ 1.35
MSH5-207ENST00000425703 FSTL1Q12841 308 aa23.51■■□□□ 1.35
MSH5-207ENST00000425703 JARID2Q92833 1246 aaPredicted RBP23.51■■□□□ 1.35
MSH5-207ENST00000425703 PLA2G12BQ9BX93 195 aa23.51■■□□□ 1.35
MSH5-207ENST00000425703 CT47B1P0C2W7 299 aaPredicted RBP23.5■■□□□ 1.35
MSH5-207ENST00000425703 BEND3Q5T5X7 828 aa23.5■■□□□ 1.35
MSH5-207ENST00000425703 UBE3BQ7Z3V4 1068 aa23.5■■□□□ 1.35
MSH5-207ENST00000425703 CDCA7LQ96GN5 454 aa23.5■■□□□ 1.35
MSH5-207ENST00000425703 ZNF541Q9H0D2 1346 aa23.5■■□□□ 1.35
MSH5-207ENST00000425703 RTL9Q8NET4 1388 aa23.5■■□□□ 1.35
MSH5-207ENST00000425703 IQCA1LA6NCM1 817 aa23.49■■□□□ 1.35
MSH5-207ENST00000425703 PPIP5K2O43314 1243 aa23.49■■□□□ 1.35
MSH5-207ENST00000425703 HSPA6P17066 643 aa23.49■■□□□ 1.35
MSH5-207ENST00000425703 GPC2Q8N158 579 aa23.49■■□□□ 1.35
MSH5-207ENST00000425703 TTLL11Q8NHH1 800 aa23.49■■□□□ 1.35
MSH5-207ENST00000425703 SEC31BQ9NQW1 1179 aa23.49■■□□□ 1.35
MSH5-207ENST00000425703 LRRC37AA6NMS7 1700 aa23.49■■□□□ 1.35
MSH5-207ENST00000425703 F6X3S4 739 aa23.48■■□□□ 1.35
MSH5-207ENST00000425703 CASP7P55210 303 aa23.48■■□□□ 1.35
MSH5-207ENST00000425703 EIF6P56537 245 aaKnown RBP23.48■■□□□ 1.35
MSH5-207ENST00000425703 KIAA2012Q0VF49 1180 aa23.48■■□□□ 1.35
MSH5-207ENST00000425703 NIM1KQ8IY84 436 aa23.48■■□□□ 1.35
MSH5-207ENST00000425703 AOC3Q16853 763 aa23.47■■□□□ 1.35
MSH5-207ENST00000425703 ALDH1L2Q3SY69 923 aa23.47■■□□□ 1.35
MSH5-207ENST00000425703 MRPL50Q8N5N7 158 aaKnown RBP23.47■■□□□ 1.35
MSH5-207ENST00000425703 SMC1BQ8NDV3 1235 aa23.47■■□□□ 1.35
MSH5-207ENST00000425703 CDC5LQ99459 802 aaKnown RBP23.47■■□□□ 1.35
MSH5-207ENST00000425703 COL4A5P29400 1685 aa23.47■■□□□ 1.35
MSH5-207ENST00000425703 PTPRCP08575 1304 aa23.46■■□□□ 1.35
MSH5-207ENST00000425703 ANKRD18AQ8IVF6 992 aa23.46■■□□□ 1.35
MSH5-207ENST00000425703 PODXL2Q9NZ53 605 aa23.46■■□□□ 1.35
MSH5-207ENST00000425703 NSFL1CQ9UNZ2 370 aaKnown RBP23.46■■□□□ 1.35
MSH5-207ENST00000425703 ALDH1L1O75891 902 aa23.45■■□□□ 1.34
MSH5-207ENST00000425703 SSH1Q8WYL5 1049 aa23.45■■□□□ 1.34
MSH5-207ENST00000425703 ZNRF3Q9ULT6 936 aa23.45■■□□□ 1.34
MSH5-207ENST00000425703 DUOX1Q9NRD9 1551 aa23.44■■□□□ 1.34
MSH5-207ENST00000425703 GPSM2P81274 684 aa23.44■■□□□ 1.34
MSH5-207ENST00000425703 CCDC85AQ96PX6 553 aaPredicted RBP23.44■■□□□ 1.34
MSH5-207ENST00000425703 TAF1P21675 1872 aa23.44■■□□□ 1.34
MSH5-207ENST00000425703 COL4A1P02462 1669 aa23.44■■□□□ 1.34
MSH5-207ENST00000425703 CSF1RP07333 972 aa23.43■■□□□ 1.34
MSH5-207ENST00000425703 SRCIN1Q9C0H9 1055 aa23.43■■□□□ 1.34
MSH5-207ENST00000425703 GREM2Q9H772 168 aa23.43■■□□□ 1.34
MSH5-207ENST00000425703 WASHC4Q2M389 1173 aa23.42■■□□□ 1.34
MSH5-207ENST00000425703 EYA3Q99504 573 aa23.42■■□□□ 1.34
MSH5-207ENST00000425703 TAF1DQ9H5J8 278 aaPredicted RBP23.42■■□□□ 1.34
MSH5-207ENST00000425703 BSDC1Q9NW68 430 aaPredicted RBP23.42■■□□□ 1.34
MSH5-207ENST00000425703 POLLQ9UGP5 575 aa23.42■■□□□ 1.34
MSH5-207ENST00000425703 HACL1Q9UJ83 578 aa23.42■■□□□ 1.34
MSH5-207ENST00000425703 GRM8O00222 908 aa23.41■■□□□ 1.34
MSH5-207ENST00000425703 TBC1D16Q8TBP0 767 aa23.41■■□□□ 1.34
MSH5-207ENST00000425703 SCN4AP35499 1836 aa23.4■■□□□ 1.34
MSH5-207ENST00000425703 C6orf229H3BNL8 230 aa23.4■■□□□ 1.34
MSH5-207ENST00000425703 APLP1P51693 650 aa23.4■■□□□ 1.34
MSH5-207ENST00000425703 SLC4A10Q6U841 1118 aa23.4■■□□□ 1.34
MSH5-207ENST00000425703 ANKIB1Q9P2G1 1089 aa23.4■■□□□ 1.34
MSH5-207ENST00000425703 XDHP47989 1333 aa23.39■■□□□ 1.34
MSH5-207ENST00000425703 BRPF1P55201 1214 aaPredicted RBP23.39■■□□□ 1.33
MSH5-207ENST00000425703 C9orf78Q9NZ63 289 aaPredicted RBP23.39■■□□□ 1.33
MSH5-207ENST00000425703 GGA1Q9UJY5 639 aa23.39■■□□□ 1.33
MSH5-207ENST00000425703 GJA3Q9Y6H8 435 aa23.39■■□□□ 1.33
MSH5-207ENST00000425703 LTBP1Q14766 1721 aa23.39■■□□□ 1.33
MSH5-207ENST00000425703 ITGA6P23229 1130 aa23.38■■□□□ 1.33
MSH5-207ENST00000425703 EPHX2P34913 555 aa23.38■■□□□ 1.33
MSH5-207ENST00000425703 CXCL9Q07325 125 aa23.38■■□□□ 1.33
MSH5-207ENST00000425703 PNMA8AQ86V59 439 aaPredicted RBP23.38■■□□□ 1.33
MSH5-207ENST00000425703 SMC4Q9NTJ3 1288 aa23.38■■□□□ 1.33
MSH5-207ENST00000425703 MYH3P11055 1940 aa23.37■■□□□ 1.33
MSH5-207ENST00000425703 IGHMBP2P38935 993 aaKnown RBP23.37■■□□□ 1.33
MSH5-207ENST00000425703 FOXO4P98177 505 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms