RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 SCN4AP35499 1836 aa27.7■■■□□ 2.02
CDCP1-202ENST00000425231 PI4KAP2A4QPH2 592 aa27.69■■■□□ 2.02
CDCP1-202ENST00000425231 IQCA1LA6NCM1 817 aa27.69■■■□□ 2.02
CDCP1-202ENST00000425231 PI4KAP1Q8N8J0 262 aa27.69■■■□□ 2.02
CDCP1-202ENST00000425231 SPINK5Q9NQ38 1064 aaPredicted RBP27.69■■■□□ 2.02
CDCP1-202ENST00000425231 SLC4A2P04920 1241 aa27.68■■■□□ 2.02
CDCP1-202ENST00000425231 G2E3Q7L622 706 aa27.68■■■□□ 2.02
CDCP1-202ENST00000425231 GPC2Q8N158 579 aa27.68■■■□□ 2.02
CDCP1-202ENST00000425231 VPS33BQ9H267 617 aa27.68■■■□□ 2.02
CDCP1-202ENST00000425231 PCCAP05165 728 aaPredicted RBP27.67■■■□□ 2.02
CDCP1-202ENST00000425231 POTEIP0CG38 1075 aa27.67■■■□□ 2.02
CDCP1-202ENST00000425231 POTEJP0CG39 1038 aa27.67■■■□□ 2.02
CDCP1-202ENST00000425231 MPNDQ8N594 471 aa27.67■■■□□ 2.02
CDCP1-202ENST00000425231 CELF1Q92879 486 aaKnown RBP27.67■■■□□ 2.02
CDCP1-202ENST00000425231 TAF1DQ9H5J8 278 aaPredicted RBP27.67■■■□□ 2.02
CDCP1-202ENST00000425231 CWC25Q9NXE8 425 aaPredicted RBP27.67■■■□□ 2.02
CDCP1-202ENST00000425231 VAMP4O75379 141 aa27.67■■■□□ 2.02
CDCP1-202ENST00000425231 HTRA3P83110 453 aa27.67■■■□□ 2.02
CDCP1-202ENST00000425231 AOC3Q16853 763 aa27.67■■■□□ 2.02
CDCP1-202ENST00000425231 DPP8Q6V1X1 898 aaPredicted RBP27.67■■■□□ 2.02
CDCP1-202ENST00000425231 TMC4Q7Z404 712 aa27.67■■■□□ 2.02
CDCP1-202ENST00000425231 COL4A1P02462 1669 aa27.66■■■□□ 2.02
CDCP1-202ENST00000425231 PPIP5K2O43314 1243 aa27.66■■■□□ 2.02
CDCP1-202ENST00000425231 IGKV5-2P06315 115 aa27.66■■■□□ 2.02
CDCP1-202ENST00000425231 EIF6P56537 245 aaKnown RBP27.66■■■□□ 2.02
CDCP1-202ENST00000425231 EXOSC9Q06265 439 aaKnown RBP27.66■■■□□ 2.02
CDCP1-202ENST00000425231 SUPT20HQ8NEM7 779 aa27.66■■■□□ 2.02
CDCP1-202ENST00000425231 JARID2Q92833 1246 aaPredicted RBP27.65■■■□□ 2.02
CDCP1-202ENST00000425231 LRRC37AA6NMS7 1700 aa27.64■■■□□ 2.02
CDCP1-202ENST00000425231 CHADLQ6NUI6 762 aa27.64■■■□□ 2.02
CDCP1-202ENST00000425231 NIM1KQ8IY84 436 aa27.64■■■□□ 2.02
CDCP1-202ENST00000425231 HACL1Q9UJ83 578 aa27.64■■■□□ 2.02
CDCP1-202ENST00000425231 HSP90B1P14625 803 aaKnown RBP27.63■■■□□ 2.01
CDCP1-202ENST00000425231 PDE8AO60658 829 aa27.61■■■□□ 2.01
CDCP1-202ENST00000425231 KIAA2012Q0VF49 1180 aa27.61■■■□□ 2.01
CDCP1-202ENST00000425231 FLIIQ13045 1269 aa27.61■■■□□ 2.01
CDCP1-202ENST00000425231 GJA3Q9Y6H8 435 aa27.61■■■□□ 2.01
CDCP1-202ENST00000425231 DUOX1Q9NRD9 1551 aa27.61■■■□□ 2.01
CDCP1-202ENST00000425231 CACNA1FO60840 1977 aa27.6■■■□□ 2.01
CDCP1-202ENST00000425231 EPHX2P34913 555 aa27.6■■■□□ 2.01
CDCP1-202ENST00000425231 RPS8P62241 208 aaKnown RBP27.6■■■□□ 2.01
CDCP1-202ENST00000425231 LDHDQ86WU2 507 aa27.6■■■□□ 2.01
CDCP1-202ENST00000425231 SEC31BQ9NQW1 1179 aa27.6■■■□□ 2.01
CDCP1-202ENST00000425231 CDHR2Q9BYE9 1310 aa27.59■■■□□ 2.01
CDCP1-202ENST00000425231 NEXNQ0ZGT2 675 aa27.59■■■□□ 2.01
CDCP1-202ENST00000425231 CWF19L2Q2TBE0 894 aaKnown RBP27.59■■■□□ 2.01
CDCP1-202ENST00000425231 MYH16Q9H6N6 1097 aa27.59■■■□□ 2.01
CDCP1-202ENST00000425231 ZNRF3Q9ULT6 936 aa27.59■■■□□ 2.01
CDCP1-202ENST00000425231 ZNF521Q96K83 1311 aa27.59■■■□□ 2.01
CDCP1-202ENST00000425231 NEURL1BA8MQ27 555 aa27.58■■■□□ 2.01
CDCP1-202ENST00000425231 SCNN1DP51172 638 aa27.58■■■□□ 2
CDCP1-202ENST00000425231 CCDC152Q4G0S7 254 aa27.58■■■□□ 2
CDCP1-202ENST00000425231 NSFL1CQ9UNZ2 370 aaKnown RBP27.58■■■□□ 2
CDCP1-202ENST00000425231 LTBP1Q14766 1721 aa27.57■■■□□ 2
CDCP1-202ENST00000425231 CXCL9Q07325 125 aa27.57■■■□□ 2
CDCP1-202ENST00000425231 EAPPQ56P03 285 aaPredicted RBP27.57■■■□□ 2
CDCP1-202ENST00000425231 ADAMTSL1Q8N6G6 1762 aa27.57■■■□□ 2
CDCP1-202ENST00000425231 GPSM2P81274 684 aa27.56■■■□□ 2
CDCP1-202ENST00000425231 FKBP5Q13451 457 aaPredicted RBP27.56■■■□□ 2
CDCP1-202ENST00000425231 PNMA8AQ86V59 439 aaPredicted RBP27.56■■■□□ 2
CDCP1-202ENST00000425231 KLRG1Q96E93 195 aa27.56■■■□□ 2
CDCP1-202ENST00000425231 CCDC85AQ96PX6 553 aaPredicted RBP27.55■■■□□ 2
CDCP1-202ENST00000425231 POLLQ9UGP5 575 aa27.55■■■□□ 2
CDCP1-202ENST00000425231 H7C1W4 665 aa27.54■■■□□ 2
CDCP1-202ENST00000425231 EPS15P42566 896 aa27.54■■■□□ 2
CDCP1-202ENST00000425231 DNAAF4Q8WXU2 420 aa27.54■■■□□ 2
CDCP1-202ENST00000425231 WASHC4Q2M389 1173 aa27.53■■■□□ 2
CDCP1-202ENST00000425231 YDJCA8MPS7 323 aa27.52■■■□□ 2
CDCP1-202ENST00000425231 ITGBL1O95965 494 aaPredicted RBP27.52■■■□□ 2
CDCP1-202ENST00000425231 LMOD1P29536 600 aaPredicted RBP27.52■■■□□ 2
CDCP1-202ENST00000425231 CTSWP56202 376 aa27.52■■■□□ 2
CDCP1-202ENST00000425231 GCKRQ14397 625 aa27.52■■■□□ 2
CDCP1-202ENST00000425231 TTLL11Q8NHH1 800 aa27.52■■■□□ 2
CDCP1-202ENST00000425231 PASKQ96RG2 1323 aa27.52■■■□□ 2
CDCP1-202ENST00000425231 PODXL2Q9NZ53 605 aa27.51■■□□□ 1.99
CDCP1-202ENST00000425231 CLEC11AQ9Y240 323 aa27.51■■□□□ 1.99
CDCP1-202ENST00000425231 C6orf229H3BNL8 230 aa27.5■■□□□ 1.99
CDCP1-202ENST00000425231 CIAPIN1Q6FI81 312 aa27.5■■□□□ 1.99
CDCP1-202ENST00000425231 UBE3BQ7Z3V4 1068 aa27.5■■□□□ 1.99
CDCP1-202ENST00000425231 LINS1Q8NG48 757 aa27.5■■□□□ 1.99
CDCP1-202ENST00000425231 TBC1D16Q8TBP0 767 aa27.5■■□□□ 1.99
CDCP1-202ENST00000425231 MYH3P11055 1940 aa27.5■■□□□ 1.99
CDCP1-202ENST00000425231 RAD17O75943 681 aa27.5■■□□□ 1.99
CDCP1-202ENST00000425231 GPRC5DQ9NZD1 345 aa27.5■■□□□ 1.99
CDCP1-202ENST00000425231 RIMBP2O15034 1052 aa27.49■■□□□ 1.99
CDCP1-202ENST00000425231 CASP7P55210 303 aa27.49■■□□□ 1.99
CDCP1-202ENST00000425231 JMYQ8N9B5 988 aa27.49■■□□□ 1.99
CDCP1-202ENST00000425231 MAP1SQ66K74 1059 aaPredicted RBP27.48■■□□□ 1.99
CDCP1-202ENST00000425231 ANKRD18AQ8IVF6 992 aa27.48■■□□□ 1.99
CDCP1-202ENST00000425231 GREM2Q9H772 168 aa27.48■■□□□ 1.99
CDCP1-202ENST00000425231 F6X3S4 739 aa27.47■■□□□ 1.99
CDCP1-202ENST00000425231 GMPSP49915 693 aaPredicted RBP27.47■■□□□ 1.99
CDCP1-202ENST00000425231 TNIP1Q15025 636 aa27.47■■□□□ 1.99
CDCP1-202ENST00000425231 CNTROBQ8N137 903 aa27.47■■□□□ 1.99
CDCP1-202ENST00000425231 GPR101Q96P66 508 aaPredicted RBP27.47■■□□□ 1.99
CDCP1-202ENST00000425231 EYA3Q99504 573 aa27.47■■□□□ 1.99
CDCP1-202ENST00000425231 PLA2G12BQ9BX93 195 aa27.47■■□□□ 1.99
CDCP1-202ENST00000425231 CREBZFQ9NS37 354 aa27.47■■□□□ 1.99
CDCP1-202ENST00000425231 PCNTO95613 3336 aa27.46■■□□□ 1.99
CDCP1-202ENST00000425231 RTL9Q8NET4 1388 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms