RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 MRPL50Q8N5N7 158 aaKnown RBP28.43■■■□□ 2.14
PTCHD3P2-201ENST00000424937 LINS1Q8NG48 757 aa28.43■■■□□ 2.14
PTCHD3P2-201ENST00000424937 BCL2L13Q9BXK5 485 aa28.43■■■□□ 2.14
PTCHD3P2-201ENST00000424937 PDE8AO60658 829 aa28.42■■■□□ 2.14
PTCHD3P2-201ENST00000424937 SSH1Q8WYL5 1049 aa28.42■■■□□ 2.14
PTCHD3P2-201ENST00000424937 TMX4Q9H1E5 349 aaPredicted RBP28.42■■■□□ 2.14
PTCHD3P2-201ENST00000424937 ZNF277Q9NRM2 450 aaPredicted RBP28.42■■■□□ 2.14
PTCHD3P2-201ENST00000424937 UBE3BQ7Z3V4 1068 aa28.41■■■□□ 2.14
PTCHD3P2-201ENST00000424937 ATP6V0A2Q9Y487 856 aa28.41■■■□□ 2.14
PTCHD3P2-201ENST00000424937 BBOX1O75936 387 aa28.4■■■□□ 2.14
PTCHD3P2-201ENST00000424937 GCKRQ14397 625 aa28.4■■■□□ 2.14
PTCHD3P2-201ENST00000424937 PSMD1Q99460 953 aa28.39■■■□□ 2.14
PTCHD3P2-201ENST00000424937 CCDC152Q4G0S7 254 aa28.38■■■□□ 2.13
PTCHD3P2-201ENST00000424937 GRIPAP1Q4V328 841 aa28.38■■■□□ 2.13
PTCHD3P2-201ENST00000424937 BEND3Q5T5X7 828 aa28.38■■■□□ 2.13
PTCHD3P2-201ENST00000424937 CELF1Q92879 486 aaKnown RBP28.38■■■□□ 2.13
PTCHD3P2-201ENST00000424937 CCDC85AQ96PX6 553 aaPredicted RBP28.38■■■□□ 2.13
PTCHD3P2-201ENST00000424937 SMC4Q9NTJ3 1288 aa28.38■■■□□ 2.13
PTCHD3P2-201ENST00000424937 KDM2BQ8NHM5 1336 aa28.38■■■□□ 2.13
PTCHD3P2-201ENST00000424937 H7C1W4 665 aa28.37■■■□□ 2.13
PTCHD3P2-201ENST00000424937 CT47B1P0C2W7 299 aaPredicted RBP28.37■■■□□ 2.13
PTCHD3P2-201ENST00000424937 CTSWP56202 376 aa28.37■■■□□ 2.13
PTCHD3P2-201ENST00000424937 ALDH1L2Q3SY69 923 aa28.37■■■□□ 2.13
PTCHD3P2-201ENST00000424937 SLC4A10Q6U841 1118 aa28.37■■■□□ 2.13
PTCHD3P2-201ENST00000424937 IARSP41252 1262 aaKnown RBP28.36■■■□□ 2.13
PTCHD3P2-201ENST00000424937 SP8Q8IXZ3 490 aa28.36■■■□□ 2.13
PTCHD3P2-201ENST00000424937 TMC4Q7Z404 712 aa28.35■■■□□ 2.13
PTCHD3P2-201ENST00000424937 NMRK2Q9NPI5 230 aa28.35■■■□□ 2.13
PTCHD3P2-201ENST00000424937 SEC31BQ9NQW1 1179 aa28.35■■■□□ 2.13
PTCHD3P2-201ENST00000424937 PTPRCP08575 1304 aa28.35■■■□□ 2.13
PTCHD3P2-201ENST00000424937 DUOX1Q9NRD9 1551 aa28.34■■■□□ 2.13
PTCHD3P2-201ENST00000424937 COL4A5P29400 1685 aa28.33■■■□□ 2.13
PTCHD3P2-201ENST00000424937 LTBP1Q14766 1721 aa28.33■■■□□ 2.13
PTCHD3P2-201ENST00000424937 CASP7P55210 303 aa28.33■■■□□ 2.13
PTCHD3P2-201ENST00000424937 GLTPD2A6NH11 291 aa28.32■■■□□ 2.12
PTCHD3P2-201ENST00000424937 DPP8Q6V1X1 898 aaPredicted RBP28.32■■■□□ 2.12
PTCHD3P2-201ENST00000424937 MPNDQ8N594 471 aa28.32■■■□□ 2.12
PTCHD3P2-201ENST00000424937 SRCIN1Q9C0H9 1055 aa28.32■■■□□ 2.12
PTCHD3P2-201ENST00000424937 WDR90Q96KV7 1748 aa28.32■■■□□ 2.12
PTCHD3P2-201ENST00000424937 KIF3CO14782 793 aa28.31■■■□□ 2.12
PTCHD3P2-201ENST00000424937 RPS8P62241 208 aaKnown RBP28.31■■■□□ 2.12
PTCHD3P2-201ENST00000424937 ZBED9Q6R2W3 1325 aa28.3■■■□□ 2.12
PTCHD3P2-201ENST00000424937 ALDH1L1O75891 902 aa28.3■■■□□ 2.12
PTCHD3P2-201ENST00000424937 TTLL11Q8NHH1 800 aa28.3■■■□□ 2.12
PTCHD3P2-201ENST00000424937 PLA2G12BQ9BX93 195 aa28.3■■■□□ 2.12
PTCHD3P2-201ENST00000424937 DPY19L2Q6NUT2 758 aa28.29■■■□□ 2.12
PTCHD3P2-201ENST00000424937 LARGE2Q8N3Y3 721 aa28.29■■■□□ 2.12
PTCHD3P2-201ENST00000424937 SUPT20HQ8NEM7 779 aa28.29■■■□□ 2.12
PTCHD3P2-201ENST00000424937 GREM2Q9H772 168 aa28.29■■■□□ 2.12
PTCHD3P2-201ENST00000424937 RTL9Q8NET4 1388 aa28.28■■■□□ 2.12
PTCHD3P2-201ENST00000424937 GRM8O00222 908 aa28.28■■■□□ 2.12
PTCHD3P2-201ENST00000424937 PPIP5K2O43314 1243 aa28.28■■■□□ 2.12
PTCHD3P2-201ENST00000424937 JDP2Q8WYK2 163 aa28.28■■■□□ 2.12
PTCHD3P2-201ENST00000424937 RTFDC1Q9BY42 306 aaPredicted RBP28.28■■■□□ 2.12
PTCHD3P2-201ENST00000424937 C9orf78Q9NZ63 289 aaPredicted RBP28.28■■■□□ 2.12
PTCHD3P2-201ENST00000424937 ZNF541Q9H0D2 1346 aa28.27■■■□□ 2.12
PTCHD3P2-201ENST00000424937 AOC3Q16853 763 aa28.27■■■□□ 2.12
PTCHD3P2-201ENST00000424937 ANKRD18AQ8IVF6 992 aa28.27■■■□□ 2.12
PTCHD3P2-201ENST00000424937 CDC5LQ99459 802 aaKnown RBP28.27■■■□□ 2.12
PTCHD3P2-201ENST00000424937 RRAGCQ9HB90 399 aa28.27■■■□□ 2.12
PTCHD3P2-201ENST00000424937 RARSP54136 660 aaKnown RBP28.26■■■□□ 2.11
PTCHD3P2-201ENST00000424937 C1QTNF8P60827 252 aa28.25■■■□□ 2.11
PTCHD3P2-201ENST00000424937 FAM161AQ3B820 660 aa28.25■■■□□ 2.11
PTCHD3P2-201ENST00000424937 NSFL1CQ9UNZ2 370 aaKnown RBP28.25■■■□□ 2.11
PTCHD3P2-201ENST00000424937 DDNO94850 711 aaPredicted RBP28.24■■■□□ 2.11
PTCHD3P2-201ENST00000424937 GPSM2P81274 684 aa28.24■■■□□ 2.11
PTCHD3P2-201ENST00000424937 NIM1KQ8IY84 436 aa28.24■■■□□ 2.11
PTCHD3P2-201ENST00000424937 NOB1Q9ULX3 412 aaKnown RBP28.24■■■□□ 2.11
PTCHD3P2-201ENST00000424937 SCN4AP35499 1836 aa28.24■■■□□ 2.11
PTCHD3P2-201ENST00000424937 FZD9O00144 591 aa28.22■■■□□ 2.11
PTCHD3P2-201ENST00000424937 ITGA6P23229 1130 aa28.22■■■□□ 2.11
PTCHD3P2-201ENST00000424937 BRPF1P55201 1214 aaPredicted RBP28.22■■■□□ 2.11
PTCHD3P2-201ENST00000424937 C16orf71Q8IYS4 520 aaPredicted RBP28.22■■■□□ 2.11
PTCHD3P2-201ENST00000424937 VPS33BQ9H267 617 aa28.22■■■□□ 2.11
PTCHD3P2-201ENST00000424937 A0A1B0GUL6 1792 aa28.22■■■□□ 2.11
PTCHD3P2-201ENST00000424937 KIF16BQ96L93 1317 aa28.21■■■□□ 2.11
PTCHD3P2-201ENST00000424937 CSF1RP07333 972 aa28.21■■■□□ 2.11
PTCHD3P2-201ENST00000424937 FOXO4P98177 505 aa28.21■■■□□ 2.11
PTCHD3P2-201ENST00000424937 CHMP3Q9Y3E7 222 aa28.21■■■□□ 2.11
PTCHD3P2-201ENST00000424937 C6orf229H3BNL8 230 aa28.2■■■□□ 2.1
PTCHD3P2-201ENST00000424937 EIF6P56537 245 aaKnown RBP28.2■■■□□ 2.1
PTCHD3P2-201ENST00000424937 KIAA2012Q0VF49 1180 aa28.2■■■□□ 2.1
PTCHD3P2-201ENST00000424937 ANKIB1Q9P2G1 1089 aa28.2■■■□□ 2.1
PTCHD3P2-201ENST00000424937 VEGFAP15692 232 aaPredicted RBP28.19■■■□□ 2.1
PTCHD3P2-201ENST00000424937 IGHMBP2P38935 993 aaKnown RBP28.19■■■□□ 2.1
PTCHD3P2-201ENST00000424937 EPHA10Q5JZY3 1008 aa28.19■■■□□ 2.1
PTCHD3P2-201ENST00000424937 API5Q9BZZ5 524 aaKnown RBP28.19■■■□□ 2.1
PTCHD3P2-201ENST00000424937 NBPF7P0C2Y1 421 aaPredicted RBP28.18■■■□□ 2.1
PTCHD3P2-201ENST00000424937 SUCLG2Q96I99 432 aa28.18■■■□□ 2.1
PTCHD3P2-201ENST00000424937 POLLQ9UGP5 575 aa28.18■■■□□ 2.1
PTCHD3P2-201ENST00000424937 UTYO14607 1347 aa28.18■■■□□ 2.1
PTCHD3P2-201ENST00000424937 TOMM70O94826 608 aa28.17■■■□□ 2.1
PTCHD3P2-201ENST00000424937 UFL1O94874 794 aa28.17■■■□□ 2.1
PTCHD3P2-201ENST00000424937 WASHC4Q2M389 1173 aa28.17■■■□□ 2.1
PTCHD3P2-201ENST00000424937 LMBR1LQ6UX01 489 aa28.17■■■□□ 2.1
PTCHD3P2-201ENST00000424937 TBC1D16Q8TBP0 767 aa28.17■■■□□ 2.1
PTCHD3P2-201ENST00000424937 GPR101Q96P66 508 aaPredicted RBP28.17■■■□□ 2.1
PTCHD3P2-201ENST00000424937 BSDC1Q9NW68 430 aaPredicted RBP28.17■■■□□ 2.1
PTCHD3P2-201ENST00000424937 PODXL2Q9NZ53 605 aa28.17■■■□□ 2.1
PTCHD3P2-201ENST00000424937 XDHP47989 1333 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms