RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 RAD50Q92878 1312 aa19.97■□□□□ 0.79
CMTM3-202ENST00000424011 LOC102724428A0A0B4J2F2 783 aa19.97■□□□□ 0.79
CMTM3-202ENST00000424011 SIK1P57059 783 aa19.97■□□□□ 0.79
CMTM3-202ENST00000424011 CCDC57Q2TAC2 916 aa19.97■□□□□ 0.79
CMTM3-202ENST00000424011 PALD1Q9ULE6 856 aa19.97■□□□□ 0.79
CMTM3-202ENST00000424011 AK9Q5TCS8 1911 aa19.97■□□□□ 0.79
CMTM3-202ENST00000424011 CDHR2Q9BYE9 1310 aa19.96■□□□□ 0.79
CMTM3-202ENST00000424011 HSPA4P34932 840 aa19.96■□□□□ 0.79
CMTM3-202ENST00000424011 PALLDQ8WX93 1383 aa19.96■□□□□ 0.79
CMTM3-202ENST00000424011 EYA2O00167 538 aa19.96■□□□□ 0.79
CMTM3-202ENST00000424011 DZIP3Q86Y13 1208 aaKnown RBP19.96■□□□□ 0.79
CMTM3-202ENST00000424011 XRCC6P12956 609 aaKnown RBP eCLIP19.95■□□□□ 0.78
CMTM3-202ENST00000424011 ATP6V1AP38606 617 aa19.95■□□□□ 0.78
CMTM3-202ENST00000424011 NLRP10Q86W26 655 aa19.95■□□□□ 0.78
CMTM3-202ENST00000424011 BOLA2Q9H3K6 86 aa19.95■□□□□ 0.78
CMTM3-202ENST00000424011 DBNLQ9UJU6 430 aaKnown RBP19.95■□□□□ 0.78
CMTM3-202ENST00000424011 DDX11L8A8MPP1 907 aa19.94■□□□□ 0.78
CMTM3-202ENST00000424011 TRAK2O60296 914 aa19.94■□□□□ 0.78
CMTM3-202ENST00000424011 FAM182BQ5T319 152 aa19.94■□□□□ 0.78
CMTM3-202ENST00000424011 ATG9AQ7Z3C6 839 aa19.94■□□□□ 0.78
CMTM3-202ENST00000424011 CCDC87Q9NVE4 849 aa19.94■□□□□ 0.78
CMTM3-202ENST00000424011 SSFA2P28290 1259 aa19.94■□□□□ 0.78
CMTM3-202ENST00000424011 HLFQ16534 295 aa19.94■□□□□ 0.78
CMTM3-202ENST00000424011 LSG1Q9H089 658 aaKnown RBP19.94■□□□□ 0.78
CMTM3-202ENST00000424011 NEK4P51957 841 aa19.93■□□□□ 0.78
CMTM3-202ENST00000424011 FAM89AQ96GI7 184 aa19.93■□□□□ 0.78
CMTM3-202ENST00000424011 CSF1RP07333 972 aa19.93■□□□□ 0.78
CMTM3-202ENST00000424011 PTF1AQ7RTS3 328 aa19.93■□□□□ 0.78
CMTM3-202ENST00000424011 FSD1Q9BTV5 496 aa19.93■□□□□ 0.78
CMTM3-202ENST00000424011 FSD2A1L4K1 749 aa19.92■□□□□ 0.78
CMTM3-202ENST00000424011 EIF5P55010 431 aaKnown RBP19.92■□□□□ 0.78
CMTM3-202ENST00000424011 GBP4Q96PP9 640 aa19.92■□□□□ 0.78
CMTM3-202ENST00000424011 GOLGA6L3A6NEY3 463 aa19.92■□□□□ 0.78
CMTM3-202ENST00000424011 RFX7Q2KHR2 1363 aa19.91■□□□□ 0.78
CMTM3-202ENST00000424011 GPTP24298 496 aa19.91■□□□□ 0.78
CMTM3-202ENST00000424011 CRKLP46109 303 aaKnown RBP19.91■□□□□ 0.78
CMTM3-202ENST00000424011 IFIT5Q13325 482 aaKnown RBP19.91■□□□□ 0.78
CMTM3-202ENST00000424011 ITPK1Q13572 414 aa19.91■□□□□ 0.78
CMTM3-202ENST00000424011 ZNF772Q68DY9 489 aaPredicted RBP19.91■□□□□ 0.78
CMTM3-202ENST00000424011 INTS5Q6P9B9 1019 aaKnown RBP19.91■□□□□ 0.78
CMTM3-202ENST00000424011 TICAM2Q86XR7 235 aa19.91■□□□□ 0.78
CMTM3-202ENST00000424011 CWC22Q9HCG8 908 aaKnown RBP19.91■□□□□ 0.78
CMTM3-202ENST00000424011 TAF7LQ5H9L4 462 aa19.91■□□□□ 0.78
CMTM3-202ENST00000424011 DBNDD2Q9BQY9 259 aa19.91■□□□□ 0.78
CMTM3-202ENST00000424011 CEP126Q9P2H0 1117 aa19.91■□□□□ 0.78
CMTM3-202ENST00000424011 ZGPATQ8N5A5 531 aaKnown RBP19.9■□□□□ 0.78
CMTM3-202ENST00000424011 HAUS7Q99871 368 aa19.9■□□□□ 0.78
CMTM3-202ENST00000424011 GZF1Q9H116 711 aaPredicted RBP19.9■□□□□ 0.78
CMTM3-202ENST00000424011 SNRKQ9NRH2 765 aa19.9■□□□□ 0.78
CMTM3-202ENST00000424011 TBC1D2BQ9UPU7 963 aa19.9■□□□□ 0.78
CMTM3-202ENST00000424011 AKAP2Q9Y2D5 859 aa19.9■□□□□ 0.78
CMTM3-202ENST00000424011 CICQ96RK0 1608 aaPredicted RBP19.9■□□□□ 0.78
CMTM3-202ENST00000424011 AK7Q96M32 723 aa19.9■□□□□ 0.78
CMTM3-202ENST00000424011 TRMT112Q9UI30 125 aaKnown RBP19.9■□□□□ 0.78
CMTM3-202ENST00000424011 ZNF34Q8IZ26 560 aa19.89■□□□□ 0.77
CMTM3-202ENST00000424011 NEUROD6Q96NK8 337 aa19.89■□□□□ 0.77
CMTM3-202ENST00000424011 LRRC24Q50LG9 513 aa19.88■□□□□ 0.77
CMTM3-202ENST00000424011 ZNF594Q96JF6 807 aaPredicted RBP19.88■□□□□ 0.77
CMTM3-202ENST00000424011 CTSWP56202 376 aa19.88■□□□□ 0.77
CMTM3-202ENST00000424011 NMIQ13287 307 aaPredicted RBP19.88■□□□□ 0.77
CMTM3-202ENST00000424011 PDCL3Q9H2J4 239 aa19.88■□□□□ 0.77
CMTM3-202ENST00000424011 IRS4O14654 1257 aaPredicted RBP19.87■□□□□ 0.77
CMTM3-202ENST00000424011 TMX3Q96JJ7 454 aa19.87■□□□□ 0.77
CMTM3-202ENST00000424011 ANKRD36CQ5JPF3 1778 aa19.87■□□□□ 0.77
CMTM3-202ENST00000424011 PDE8AO60658 829 aa19.87■□□□□ 0.77
CMTM3-202ENST00000424011 CYP2E1P05181 493 aaPredicted RBP19.87■□□□□ 0.77
CMTM3-202ENST00000424011 PKP1Q13835 747 aa19.87■□□□□ 0.77
CMTM3-202ENST00000424011 CLEC17AQ6ZS10 378 aa19.87■□□□□ 0.77
CMTM3-202ENST00000424011 CCDC171Q6TFL3 1326 aa19.87■□□□□ 0.77
CMTM3-202ENST00000424011 ZNF609O15014 1411 aa19.87■□□□□ 0.77
CMTM3-202ENST00000424011 HSP90B1P14625 803 aaKnown RBP19.86■□□□□ 0.77
CMTM3-202ENST00000424011 RBM6P78332 1123 aaKnown RBP19.86■□□□□ 0.77
CMTM3-202ENST00000424011 NUCB2P80303 420 aa19.86■□□□□ 0.77
CMTM3-202ENST00000424011 TTLL11Q8NHH1 800 aa19.86■□□□□ 0.77
CMTM3-202ENST00000424011 SNX14Q9Y5W7 946 aa19.86■□□□□ 0.77
CMTM3-202ENST00000424011 NHSQ6T4R5 1651 aa19.86■□□□□ 0.77
CMTM3-202ENST00000424011 A0A1B0GUL7 405 aa19.86■□□□□ 0.77
CMTM3-202ENST00000424011 ANKRD18BA2A2Z9 1011 aa19.86■□□□□ 0.77
CMTM3-202ENST00000424011 PARP10Q53GL7 1025 aa19.86■□□□□ 0.77
CMTM3-202ENST00000424011 KRT27Q7Z3Y8 459 aa19.86■□□□□ 0.77
CMTM3-202ENST00000424011 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.86■□□□□ 0.77
CMTM3-202ENST00000424011 FAM227BQ96M60 508 aa19.86■□□□□ 0.77
CMTM3-202ENST00000424011 TPM2P07951 284 aa19.85■□□□□ 0.77
CMTM3-202ENST00000424011 TIMM10P62072 90 aa19.85■□□□□ 0.77
CMTM3-202ENST00000424011 DNAJC2Q99543 621 aaKnown RBP19.85■□□□□ 0.77
CMTM3-202ENST00000424011 PANK2Q9BZ23 570 aa19.85■□□□□ 0.77
CMTM3-202ENST00000424011 UPF3BQ9BZI7 483 aaKnown RBP19.85■□□□□ 0.77
CMTM3-202ENST00000424011 RREB1Q92766 1687 aa19.85■□□□□ 0.77
CMTM3-202ENST00000424011 ZKSCAN1P17029 563 aaPredicted RBP19.85■□□□□ 0.77
CMTM3-202ENST00000424011 PUS3Q9BZE2 481 aaKnown RBP19.85■□□□□ 0.77
CMTM3-202ENST00000424011 BAG4O95429 457 aaKnown RBP19.84■□□□□ 0.77
CMTM3-202ENST00000424011 ITGA6P23229 1130 aa19.84■□□□□ 0.77
CMTM3-202ENST00000424011 MAP4K1Q92918 833 aa19.84■□□□□ 0.77
CMTM3-202ENST00000424011 KCNB2Q92953 911 aa19.84■□□□□ 0.77
CMTM3-202ENST00000424011 ZNF652Q9Y2D9 606 aa19.84■□□□□ 0.77
CMTM3-202ENST00000424011 ZNF831Q5JPB2 1677 aa19.84■□□□□ 0.77
CMTM3-202ENST00000424011 UBN2Q6ZU65 1347 aa19.84■□□□□ 0.77
CMTM3-202ENST00000424011 KCNJ4P48050 445 aa19.84■□□□□ 0.77
CMTM3-202ENST00000424011 PTH1RQ03431 593 aa19.84■□□□□ 0.77
CMTM3-202ENST00000424011 CCDC158Q5M9N0 1113 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms