RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 GRIN3BO60391 1043 aa27.36■■□□□ 1.97
SEC22C-207ENST00000423701 NBPF7P0C2Y1 421 aaPredicted RBP27.36■■□□□ 1.97
SEC22C-207ENST00000423701 INTS3Q68E01 1043 aaKnown RBP27.36■■□□□ 1.97
SEC22C-207ENST00000423701 COL4A1P02462 1669 aa27.35■■□□□ 1.97
SEC22C-207ENST00000423701 DDX46Q7L014 1031 aaKnown RBP27.35■■□□□ 1.97
SEC22C-207ENST00000423701 USP44Q9H0E7 712 aa27.35■■□□□ 1.97
SEC22C-207ENST00000423701 TAF1P21675 1872 aa27.34■■□□□ 1.97
SEC22C-207ENST00000423701 CCDC152Q4G0S7 254 aa27.34■■□□□ 1.97
SEC22C-207ENST00000423701 CCDC85AQ96PX6 553 aaPredicted RBP27.34■■□□□ 1.97
SEC22C-207ENST00000423701 C21orf2O43822 256 aa27.33■■□□□ 1.97
SEC22C-207ENST00000423701 TTLL11Q8NHH1 800 aa27.33■■□□□ 1.97
SEC22C-207ENST00000423701 ZNF219Q9P2Y4 722 aaPredicted RBP27.33■■□□□ 1.97
SEC22C-207ENST00000423701 GRAPQ13588 217 aa27.32■■□□□ 1.96
SEC22C-207ENST00000423701 GRAPLQ8TC17 118 aaPredicted RBP27.32■■□□□ 1.96
SEC22C-207ENST00000423701 FTSJ3Q8IY81 847 aaKnown RBP27.32■■□□□ 1.96
SEC22C-207ENST00000423701 DZIP1LQ8IYY4 767 aaKnown RBP27.32■■□□□ 1.96
SEC22C-207ENST00000423701 C7orf43Q8WVR3 580 aa27.32■■□□□ 1.96
SEC22C-207ENST00000423701 SUCLG2Q96I99 432 aa27.32■■□□□ 1.96
SEC22C-207ENST00000423701 PPEF1O14829 653 aaPredicted RBP27.31■■□□□ 1.96
SEC22C-207ENST00000423701 FOXO4P98177 505 aa27.31■■□□□ 1.96
SEC22C-207ENST00000423701 EPHA10Q5JZY3 1008 aa27.31■■□□□ 1.96
SEC22C-207ENST00000423701 TMEM57Q8N5G2 664 aa27.31■■□□□ 1.96
SEC22C-207ENST00000423701 RTL9Q8NET4 1388 aa27.3■■□□□ 1.96
SEC22C-207ENST00000423701 RLBP1P12271 317 aa27.3■■□□□ 1.96
SEC22C-207ENST00000423701 CELF1Q92879 486 aaKnown RBP27.3■■□□□ 1.96
SEC22C-207ENST00000423701 KAZALD1Q96I82 304 aa27.3■■□□□ 1.96
SEC22C-207ENST00000423701 GREM2Q9H772 168 aa27.3■■□□□ 1.96
SEC22C-207ENST00000423701 SEC31BQ9NQW1 1179 aa27.3■■□□□ 1.96
SEC22C-207ENST00000423701 CSF1RP07333 972 aa27.29■■□□□ 1.96
SEC22C-207ENST00000423701 OLFM4Q6UX06 510 aa27.29■■□□□ 1.96
SEC22C-207ENST00000423701 ARHGAP27Q6ZUM4 889 aa27.29■■□□□ 1.96
SEC22C-207ENST00000423701 SLC51AQ86UW1 340 aa27.29■■□□□ 1.96
SEC22C-207ENST00000423701 PLIN1O60240 522 aa27.28■■□□□ 1.96
SEC22C-207ENST00000423701 FER1L6Q2WGJ9 1857 aa27.27■■□□□ 1.96
SEC22C-207ENST00000423701 BBOX1O75936 387 aa27.27■■□□□ 1.96
SEC22C-207ENST00000423701 FAM161AQ3B820 660 aa27.27■■□□□ 1.96
SEC22C-207ENST00000423701 MEIS3Q99687 375 aa27.27■■□□□ 1.96
SEC22C-207ENST00000423701 LRRC37AA6NMS7 1700 aa27.27■■□□□ 1.96
SEC22C-207ENST00000423701 SOGA3Q5TF21 947 aa27.26■■□□□ 1.95
SEC22C-207ENST00000423701 SNED1Q8TER0 1413 aa27.26■■□□□ 1.95
SEC22C-207ENST00000423701 UBTFL1P0CB47 393 aaPredicted RBP27.25■■□□□ 1.95
SEC22C-207ENST00000423701 CCDC93Q567U6 631 aa27.25■■□□□ 1.95
SEC22C-207ENST00000423701 LMBR1LQ6UX01 489 aa27.25■■□□□ 1.95
SEC22C-207ENST00000423701 PANK1Q8TE04 598 aa27.25■■□□□ 1.95
SEC22C-207ENST00000423701 ATP6V0A2Q9Y487 856 aa27.25■■□□□ 1.95
SEC22C-207ENST00000423701 BICC1Q9H694 974 aaKnown RBP27.25■■□□□ 1.95
SEC22C-207ENST00000423701 NFKBIEO00221 500 aa27.24■■□□□ 1.95
SEC22C-207ENST00000423701 ITGA6P23229 1130 aa27.24■■□□□ 1.95
SEC22C-207ENST00000423701 RPS8P62241 208 aaKnown RBP27.24■■□□□ 1.95
SEC22C-207ENST00000423701 CHMP3Q9Y3E7 222 aa27.24■■□□□ 1.95
SEC22C-207ENST00000423701 SPEF2Q9C093 1822 aa27.24■■□□□ 1.95
SEC22C-207ENST00000423701 MS4A1P11836 297 aa27.23■■□□□ 1.95
SEC22C-207ENST00000423701 RASSF7Q02833 373 aa27.23■■□□□ 1.95
SEC22C-207ENST00000423701 RABL6Q3YEC7 729 aaPredicted RBP27.23■■□□□ 1.95
SEC22C-207ENST00000423701 TMC4Q7Z404 712 aa27.23■■□□□ 1.95
SEC22C-207ENST00000423701 ITPRIPQ8IWB1 547 aa27.23■■□□□ 1.95
SEC22C-207ENST00000423701 ANKRD44Q8N8A2 993 aa27.23■■□□□ 1.95
SEC22C-207ENST00000423701 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.23■■□□□ 1.95
SEC22C-207ENST00000423701 CDC5LQ99459 802 aaKnown RBP27.23■■□□□ 1.95
SEC22C-207ENST00000423701 CC2D2BQ6DHV5 1058 aa27.22■■□□□ 1.95
SEC22C-207ENST00000423701 ANKRD18AQ8IVF6 992 aa27.22■■□□□ 1.95
SEC22C-207ENST00000423701 CHD4Q14839 1912 aa27.21■■□□□ 1.95
SEC22C-207ENST00000423701 GNAI3P08754 354 aa27.21■■□□□ 1.95
SEC22C-207ENST00000423701 SP8Q8IXZ3 490 aa27.21■■□□□ 1.95
SEC22C-207ENST00000423701 RTKN2Q8IZC4 609 aa27.2■■□□□ 1.95
SEC22C-207ENST00000423701 LRRFIP2Q9Y608 721 aaKnown RBP27.2■■□□□ 1.95
SEC22C-207ENST00000423701 ANKRD18BA2A2Z9 1011 aa27.19■■□□□ 1.94
SEC22C-207ENST00000423701 IFIT5Q13325 482 aaKnown RBP27.19■■□□□ 1.94
SEC22C-207ENST00000423701 TAOK3Q9H2K8 898 aa27.19■■□□□ 1.94
SEC22C-207ENST00000423701 LTBP3Q9NS15 1303 aa27.19■■□□□ 1.94
SEC22C-207ENST00000423701 C20orf194Q5TEA3 1177 aa27.19■■□□□ 1.94
SEC22C-207ENST00000423701 TMX4Q9H1E5 349 aaPredicted RBP27.19■■□□□ 1.94
SEC22C-207ENST00000423701 HDAC5Q9UQL6 1122 aa27.19■■□□□ 1.94
SEC22C-207ENST00000423701 SBF1O95248 1867 aa27.18■■□□□ 1.94
SEC22C-207ENST00000423701 CCDC57Q2TAC2 916 aa27.18■■□□□ 1.94
SEC22C-207ENST00000423701 LTBP1Q14766 1721 aa27.17■■□□□ 1.94
SEC22C-207ENST00000423701 PRELPP51888 382 aa27.17■■□□□ 1.94
SEC22C-207ENST00000423701 FKBP4Q02790 459 aaKnown RBP eCLIP27.17■■□□□ 1.94
SEC22C-207ENST00000423701 PDE3AQ14432 1141 aa27.17■■□□□ 1.94
SEC22C-207ENST00000423701 GRIPAP1Q4V328 841 aa27.17■■□□□ 1.94
SEC22C-207ENST00000423701 DUOX1Q9NRD9 1551 aa27.16■■□□□ 1.94
SEC22C-207ENST00000423701 IGHMBP2P38935 993 aaKnown RBP27.16■■□□□ 1.94
SEC22C-207ENST00000423701 RRP1P56182 461 aaKnown RBP27.16■■□□□ 1.94
SEC22C-207ENST00000423701 MVPQ14764 893 aaKnown RBP27.16■■□□□ 1.94
SEC22C-207ENST00000423701 BSDC1Q9NW68 430 aaPredicted RBP27.16■■□□□ 1.94
SEC22C-207ENST00000423701 ZBTB7BO15156 539 aaPredicted RBP27.15■■□□□ 1.94
SEC22C-207ENST00000423701 PSMD1Q99460 953 aa27.15■■□□□ 1.94
SEC22C-207ENST00000423701 COG6Q9Y2V7 657 aa27.15■■□□□ 1.94
SEC22C-207ENST00000423701 GNAI2P04899 355 aa27.13■■□□□ 1.93
SEC22C-207ENST00000423701 LMNB1P20700 586 aa27.13■■□□□ 1.93
SEC22C-207ENST00000423701 DPP8Q6V1X1 898 aaPredicted RBP27.13■■□□□ 1.93
SEC22C-207ENST00000423701 MPNDQ8N594 471 aa27.13■■□□□ 1.93
SEC22C-207ENST00000423701 ZNF594Q96JF6 807 aaPredicted RBP27.13■■□□□ 1.93
SEC22C-207ENST00000423701 MPHOSPH8Q99549 860 aa27.13■■□□□ 1.93
SEC22C-207ENST00000423701 CCDC88AQ3V6T2 1871 aa27.13■■□□□ 1.93
SEC22C-207ENST00000423701 GPSM2P81274 684 aa27.13■■□□□ 1.93
SEC22C-207ENST00000423701 TAF7LQ5H9L4 462 aa27.13■■□□□ 1.93
SEC22C-207ENST00000423701 C9orf131Q5VYM1 1079 aa27.13■■□□□ 1.93
SEC22C-207ENST00000423701 NSFL1CQ9UNZ2 370 aaKnown RBP27.13■■□□□ 1.93
SEC22C-207ENST00000423701 ZNF277Q9NRM2 450 aaPredicted RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms