RNA–Protein interactions for RNA: ENST00000423325.6

SRPK1-205, Transcript of SRSF protein kinase 1, humanhuman

TSL 2 BASIC

Gene SRPK1, Length 4,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-205ENST00000423325 CCDC191Q8NCU4 936 aa11.61□□□□□ -0.55
SRPK1-205ENST00000423325 NSFL1CQ9UNZ2 370 aaKnown RBP11.61□□□□□ -0.55
SRPK1-205ENST00000423325 RBM8AQ9Y5S9 174 aaKnown RBP11.61□□□□□ -0.55
SRPK1-205ENST00000423325 LRP6O75581 1613 aa11.61□□□□□ -0.55
SRPK1-205ENST00000423325 MED23Q9ULK4 1368 aa11.61□□□□□ -0.55
SRPK1-205ENST00000423325 CASTP20810 708 aaKnown RBP11.6□□□□□ -0.55
SRPK1-205ENST00000423325 MYH14Q7Z406 1995 aaKnown RBP11.6□□□□□ -0.55
SRPK1-205ENST00000423325 EXOC5O00471 708 aa11.6□□□□□ -0.55
SRPK1-205ENST00000423325 MCTP1Q6DN14 999 aa11.6□□□□□ -0.55
SRPK1-205ENST00000423325 SPATA31A1Q5TZJ5 1347 aa11.6□□□□□ -0.55
SRPK1-205ENST00000423325 UBN2Q6ZU65 1347 aa11.6□□□□□ -0.55
SRPK1-205ENST00000423325 PI16Q6UXB8 463 aa11.6□□□□□ -0.55
SRPK1-205ENST00000423325 NEUROD6Q96NK8 337 aa11.6□□□□□ -0.55
SRPK1-205ENST00000423325 ATP5JP18859 108 aa11.6□□□□□ -0.55
SRPK1-205ENST00000423325 SCARF1Q14162 830 aa11.6□□□□□ -0.55
SRPK1-205ENST00000423325 GPATCH3Q96I76 525 aa11.6□□□□□ -0.55
SRPK1-205ENST00000423325 COL4A1P02462 1669 aa11.6□□□□□ -0.55
SRPK1-205ENST00000423325 MCCP23508 829 aa11.59□□□□□ -0.55
SRPK1-205ENST00000423325 HDAC5Q9UQL6 1122 aa11.59□□□□□ -0.55
SRPK1-205ENST00000423325 VPS53Q5VIR6 699 aa11.59□□□□□ -0.55
SRPK1-205ENST00000423325 JAKMIP1Q96N16 626 aaKnown RBP11.59□□□□□ -0.55
SRPK1-205ENST00000423325 CREB3L3Q68CJ9 461 aa11.59□□□□□ -0.55
SRPK1-205ENST00000423325 MAP4K1Q92918 833 aa11.59□□□□□ -0.55
SRPK1-205ENST00000423325 NUP98P52948 1817 aa11.59□□□□□ -0.55
SRPK1-205ENST00000423325 MAP3K15Q6ZN16 1313 aa11.58□□□□□ -0.55
SRPK1-205ENST00000423325 ITPK1Q13572 414 aa11.58□□□□□ -0.55
SRPK1-205ENST00000423325 NLRP10Q86W26 655 aa11.58□□□□□ -0.55
SRPK1-205ENST00000423325 TCHHQ07283 1943 aa11.58□□□□□ -0.56
SRPK1-205ENST00000423325 RPAP1Q9BWH6 1393 aaPredicted RBP11.58□□□□□ -0.56
SRPK1-205ENST00000423325 SNAP23O00161 211 aa11.58□□□□□ -0.56
SRPK1-205ENST00000423325 SLC27A2O14975 620 aa11.58□□□□□ -0.56
SRPK1-205ENST00000423325 CLEC17AQ6ZS10 378 aa11.58□□□□□ -0.56
SRPK1-205ENST00000423325 GREM2Q9H772 168 aa11.58□□□□□ -0.56
SRPK1-205ENST00000423325 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
SRPK1-205ENST00000423325 SNRKQ9NRH2 765 aa11.58□□□□□ -0.56
SRPK1-205ENST00000423325 FSD2A1L4K1 749 aa11.58□□□□□ -0.56
SRPK1-205ENST00000423325 FAM177BA6PVY3 158 aa11.58□□□□□ -0.56
SRPK1-205ENST00000423325 EYA2O00167 538 aa11.58□□□□□ -0.56
SRPK1-205ENST00000423325 GOLIM4O00461 696 aa11.58□□□□□ -0.56
SRPK1-205ENST00000423325 TAF5LO75529 589 aa11.58□□□□□ -0.56
SRPK1-205ENST00000423325 GIGYF2Q6Y7W6 1299 aaKnown RBP11.58□□□□□ -0.56
SRPK1-205ENST00000423325 KIAA1211Q6ZU35 1233 aa11.58□□□□□ -0.56
SRPK1-205ENST00000423325 VSIG10Q8N0Z9 540 aa11.58□□□□□ -0.56
SRPK1-205ENST00000423325 LMBRD1Q9NUN5 540 aa11.58□□□□□ -0.56
SRPK1-205ENST00000423325 A0A1B0GUL7 405 aa11.57□□□□□ -0.56
SRPK1-205ENST00000423325 HSP90AB3PQ58FF7 597 aa11.57□□□□□ -0.56
SRPK1-205ENST00000423325 INTS5Q6P9B9 1019 aaKnown RBP11.57□□□□□ -0.56
SRPK1-205ENST00000423325 NECAB1Q8N987 351 aa11.57□□□□□ -0.56
SRPK1-205ENST00000423325 KCNB2Q92953 911 aa11.57□□□□□ -0.56
SRPK1-205ENST00000423325 HAUS7Q99871 368 aa11.57□□□□□ -0.56
SRPK1-205ENST00000423325 DDX11L8A8MPP1 907 aa11.57□□□□□ -0.56
SRPK1-205ENST00000423325 XRCC6P12956 609 aaKnown RBP eCLIP11.57□□□□□ -0.56
SRPK1-205ENST00000423325 FAM182BQ5T319 152 aa11.57□□□□□ -0.56
SRPK1-205ENST00000423325 GDPD2Q9HCC8 539 aa11.57□□□□□ -0.56
SRPK1-205ENST00000423325 RIC1Q4ADV7 1423 aa11.57□□□□□ -0.56
SRPK1-205ENST00000423325 STARD3NLO95772 234 aa11.56□□□□□ -0.56
SRPK1-205ENST00000423325 GPT2Q8TD30 523 aa11.56□□□□□ -0.56
SRPK1-205ENST00000423325 RBM27Q9P2N5 1060 aaKnown RBP11.56□□□□□ -0.56
SRPK1-205ENST00000423325 GBP4Q96PP9 640 aa11.56□□□□□ -0.56
SRPK1-205ENST00000423325 DDB1Q16531 1140 aa11.56□□□□□ -0.56
SRPK1-205ENST00000423325 TPCN1Q9ULQ1 816 aa11.56□□□□□ -0.56
SRPK1-205ENST00000423325 JCADQ9P266 1359 aa11.56□□□□□ -0.56
SRPK1-205ENST00000423325 MYO5AQ9Y4I1 1855 aaKnown RBP11.56□□□□□ -0.56
SRPK1-205ENST00000423325 BRD1O95696 1058 aa11.56□□□□□ -0.56
SRPK1-205ENST00000423325 PCCAP05165 728 aaPredicted RBP11.56□□□□□ -0.56
SRPK1-205ENST00000423325 KIF6Q6ZMV9 814 aa11.56□□□□□ -0.56
SRPK1-205ENST00000423325 ZBTB38Q8NAP3 1195 aaPredicted RBP11.56□□□□□ -0.56
SRPK1-205ENST00000423325 ZSWIM6Q9HCJ5 1215 aa11.56□□□□□ -0.56
SRPK1-205ENST00000423325 EIF5BO60841 1220 aaKnown RBP11.55□□□□□ -0.56
SRPK1-205ENST00000423325 ME3Q16798 604 aa11.55□□□□□ -0.56
SRPK1-205ENST00000423325 TTLL11Q8NHH1 800 aa11.55□□□□□ -0.56
SRPK1-205ENST00000423325 SPATA31A5Q5VU36 1347 aa11.55□□□□□ -0.56
SRPK1-205ENST00000423325 SPATA31A7Q8IWB4 1347 aa11.55□□□□□ -0.56
SRPK1-205ENST00000423325 PRPF40AO75400 957 aaKnown RBP11.55□□□□□ -0.56
SRPK1-205ENST00000423325 CSF1RP07333 972 aa11.55□□□□□ -0.56
SRPK1-205ENST00000423325 TRIM28Q13263 835 aaKnown RBP11.55□□□□□ -0.56
SRPK1-205ENST00000423325 STOX1Q6ZVD7 989 aa11.55□□□□□ -0.56
SRPK1-205ENST00000423325 CCDC83Q8IWF9 413 aa11.55□□□□□ -0.56
SRPK1-205ENST00000423325 ANKRD36CQ5JPF3 1778 aa11.55□□□□□ -0.56
SRPK1-205ENST00000423325 DZIP3Q86Y13 1208 aaKnown RBP11.55□□□□□ -0.56
SRPK1-205ENST00000423325 CWC22Q9HCG8 908 aaKnown RBP11.55□□□□□ -0.56
SRPK1-205ENST00000423325 FOXP2O15409 715 aa11.54□□□□□ -0.56
SRPK1-205ENST00000423325 IL15P40933 162 aaPredicted RBP11.54□□□□□ -0.56
SRPK1-205ENST00000423325 FAM98CQ17RN3 349 aaKnown RBP11.54□□□□□ -0.56
SRPK1-205ENST00000423325 RUFY2Q8WXA3 655 aa11.54□□□□□ -0.56
SRPK1-205ENST00000423325 WTIPA6NIX2 430 aaPredicted RBP11.54□□□□□ -0.56
SRPK1-205ENST00000423325 HCLS1P14317 486 aaPredicted RBP11.54□□□□□ -0.56
SRPK1-205ENST00000423325 CRKLP46109 303 aaKnown RBP11.54□□□□□ -0.56
SRPK1-205ENST00000423325 NUCB2P80303 420 aa11.54□□□□□ -0.56
SRPK1-205ENST00000423325 LRRC2Q9BYS8 371 aa11.54□□□□□ -0.56
SRPK1-205ENST00000423325 ITGA6P23229 1130 aa11.54□□□□□ -0.56
SRPK1-205ENST00000423325 HELBQ8NG08 1087 aaPredicted RBP11.54□□□□□ -0.56
SRPK1-205ENST00000423325 PDRG1Q9NUG6 133 aa11.54□□□□□ -0.56
SRPK1-205ENST00000423325 PAG1Q9NWQ8 432 aa11.54□□□□□ -0.56
SRPK1-205ENST00000423325 TOB2Q14106 344 aaPredicted RBP11.53□□□□□ -0.56
SRPK1-205ENST00000423325 CYP21A2P08686 494 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 KCNJ4P48050 445 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 CCDC57Q2TAC2 916 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 SUSD4Q5VX71 490 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 KBTBD3Q8NAB2 608 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms