RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 GCKRQ14397 625 aa27.24■■□□□ 1.95
FNDC3B-204ENST00000421757 UBE3BQ7Z3V4 1068 aa27.24■■□□□ 1.95
FNDC3B-204ENST00000421757 MRPL50Q8N5N7 158 aaKnown RBP27.24■■□□□ 1.95
FNDC3B-204ENST00000421757 PSMD1Q99460 953 aa27.24■■□□□ 1.95
FNDC3B-204ENST00000421757 CCDC152Q4G0S7 254 aa27.23■■□□□ 1.95
FNDC3B-204ENST00000421757 SLC4A10Q6U841 1118 aa27.23■■□□□ 1.95
FNDC3B-204ENST00000421757 SP8Q8IXZ3 490 aa27.23■■□□□ 1.95
FNDC3B-204ENST00000421757 SSH1Q8WYL5 1049 aa27.23■■□□□ 1.95
FNDC3B-204ENST00000421757 CCDC85AQ96PX6 553 aaPredicted RBP27.23■■□□□ 1.95
FNDC3B-204ENST00000421757 BCL2L13Q9BXK5 485 aa27.23■■□□□ 1.95
FNDC3B-204ENST00000421757 IARSP41252 1262 aaKnown RBP27.22■■□□□ 1.95
FNDC3B-204ENST00000421757 CELF1Q92879 486 aaKnown RBP27.22■■□□□ 1.95
FNDC3B-204ENST00000421757 TIAM2Q8IVF5 1701 aa27.21■■□□□ 1.95
FNDC3B-204ENST00000421757 H7C1W4 665 aa27.21■■□□□ 1.95
FNDC3B-204ENST00000421757 DPY19L2Q6NUT2 758 aa27.21■■□□□ 1.95
FNDC3B-204ENST00000421757 TMC4Q7Z404 712 aa27.21■■□□□ 1.95
FNDC3B-204ENST00000421757 NMRK2Q9NPI5 230 aa27.21■■□□□ 1.95
FNDC3B-204ENST00000421757 GLTPD2A6NH11 291 aa27.2■■□□□ 1.94
FNDC3B-204ENST00000421757 BEND3Q5T5X7 828 aa27.2■■□□□ 1.94
FNDC3B-204ENST00000421757 SNED1Q8TER0 1413 aa27.2■■□□□ 1.94
FNDC3B-204ENST00000421757 SMC4Q9NTJ3 1288 aa27.2■■□□□ 1.94
FNDC3B-204ENST00000421757 CT47B1P0C2W7 299 aaPredicted RBP27.19■■□□□ 1.94
FNDC3B-204ENST00000421757 CTSWP56202 376 aa27.19■■□□□ 1.94
FNDC3B-204ENST00000421757 ALDH1L2Q3SY69 923 aa27.19■■□□□ 1.94
FNDC3B-204ENST00000421757 DPP8Q6V1X1 898 aaPredicted RBP27.19■■□□□ 1.94
FNDC3B-204ENST00000421757 SEC31BQ9NQW1 1179 aa27.19■■□□□ 1.94
FNDC3B-204ENST00000421757 RPS8P62241 208 aaKnown RBP27.18■■□□□ 1.94
FNDC3B-204ENST00000421757 MPNDQ8N594 471 aa27.18■■□□□ 1.94
FNDC3B-204ENST00000421757 TAF1P21675 1872 aa27.17■■□□□ 1.94
FNDC3B-204ENST00000421757 KIF3CO14782 793 aa27.17■■□□□ 1.94
FNDC3B-204ENST00000421757 JDP2Q8WYK2 163 aa27.17■■□□□ 1.94
FNDC3B-204ENST00000421757 RRAGCQ9HB90 399 aa27.17■■□□□ 1.94
FNDC3B-204ENST00000421757 DICER1Q9UPY3 1922 aaKnown RBP27.17■■□□□ 1.94
FNDC3B-204ENST00000421757 PTPRCP08575 1304 aa27.16■■□□□ 1.94
FNDC3B-204ENST00000421757 C1QTNF8P60827 252 aa27.16■■□□□ 1.94
FNDC3B-204ENST00000421757 LARGE2Q8N3Y3 721 aa27.16■■□□□ 1.94
FNDC3B-204ENST00000421757 SUPT20HQ8NEM7 779 aa27.16■■□□□ 1.94
FNDC3B-204ENST00000421757 SRCIN1Q9C0H9 1055 aa27.16■■□□□ 1.94
FNDC3B-204ENST00000421757 TTLL11Q8NHH1 800 aa27.15■■□□□ 1.94
FNDC3B-204ENST00000421757 PPIP5K2O43314 1243 aa27.14■■□□□ 1.94
FNDC3B-204ENST00000421757 C16orf71Q8IYS4 520 aaPredicted RBP27.14■■□□□ 1.94
FNDC3B-204ENST00000421757 C9orf78Q9NZ63 289 aaPredicted RBP27.14■■□□□ 1.94
FNDC3B-204ENST00000421757 ALDH1L1O75891 902 aa27.13■■□□□ 1.93
FNDC3B-204ENST00000421757 CASP7P55210 303 aa27.13■■□□□ 1.93
FNDC3B-204ENST00000421757 ANKRD18AQ8IVF6 992 aa27.13■■□□□ 1.93
FNDC3B-204ENST00000421757 GREM2Q9H772 168 aa27.13■■□□□ 1.93
FNDC3B-204ENST00000421757 NSFL1CQ9UNZ2 370 aaKnown RBP27.13■■□□□ 1.93
FNDC3B-204ENST00000421757 DDNO94850 711 aaPredicted RBP27.12■■□□□ 1.93
FNDC3B-204ENST00000421757 AOC3Q16853 763 aa27.12■■□□□ 1.93
FNDC3B-204ENST00000421757 CDC5LQ99459 802 aaKnown RBP27.12■■□□□ 1.93
FNDC3B-204ENST00000421757 PLA2G12BQ9BX93 195 aa27.12■■□□□ 1.93
FNDC3B-204ENST00000421757 RTFDC1Q9BY42 306 aaPredicted RBP27.12■■□□□ 1.93
FNDC3B-204ENST00000421757 GRM8O00222 908 aa27.11■■□□□ 1.93
FNDC3B-204ENST00000421757 COL4A1P02462 1669 aa27.11■■□□□ 1.93
FNDC3B-204ENST00000421757 NIM1KQ8IY84 436 aa27.1■■□□□ 1.93
FNDC3B-204ENST00000421757 VPS33BQ9H267 617 aa27.1■■□□□ 1.93
FNDC3B-204ENST00000421757 VEGFAP15692 232 aaPredicted RBP27.09■■□□□ 1.93
FNDC3B-204ENST00000421757 EIF6P56537 245 aaKnown RBP27.09■■□□□ 1.93
FNDC3B-204ENST00000421757 GPSM2P81274 684 aa27.09■■□□□ 1.93
FNDC3B-204ENST00000421757 ZNF541Q9H0D2 1346 aa27.09■■□□□ 1.93
FNDC3B-204ENST00000421757 C6orf229H3BNL8 230 aa27.08■■□□□ 1.93
FNDC3B-204ENST00000421757 FZD9O00144 591 aa27.08■■□□□ 1.93
FNDC3B-204ENST00000421757 TOMM70O94826 608 aa27.08■■□□□ 1.93
FNDC3B-204ENST00000421757 RARSP54136 660 aaKnown RBP27.08■■□□□ 1.93
FNDC3B-204ENST00000421757 ANKIB1Q9P2G1 1089 aa27.08■■□□□ 1.93
FNDC3B-204ENST00000421757 NOB1Q9ULX3 412 aaKnown RBP27.08■■□□□ 1.93
FNDC3B-204ENST00000421757 CHMP3Q9Y3E7 222 aa27.07■■□□□ 1.92
FNDC3B-204ENST00000421757 MYH3P11055 1940 aa27.07■■□□□ 1.92
FNDC3B-204ENST00000421757 ZBED9Q6R2W3 1325 aa27.07■■□□□ 1.92
FNDC3B-204ENST00000421757 RTL9Q8NET4 1388 aa27.07■■□□□ 1.92
FNDC3B-204ENST00000421757 LRRC37AA6NMS7 1700 aa27.07■■□□□ 1.92
FNDC3B-204ENST00000421757 CSF1RP07333 972 aa27.06■■□□□ 1.92
FNDC3B-204ENST00000421757 ITGA6P23229 1130 aa27.06■■□□□ 1.92
FNDC3B-204ENST00000421757 FAM161AQ3B820 660 aa27.06■■□□□ 1.92
FNDC3B-204ENST00000421757 IGHMBP2P38935 993 aaKnown RBP27.05■■□□□ 1.92
FNDC3B-204ENST00000421757 KIAA2012Q0VF49 1180 aa27.05■■□□□ 1.92
FNDC3B-204ENST00000421757 WASHC4Q2M389 1173 aa27.05■■□□□ 1.92
FNDC3B-204ENST00000421757 COL4A5P29400 1685 aa27.05■■□□□ 1.92
FNDC3B-204ENST00000421757 FOXO4P98177 505 aa27.04■■□□□ 1.92
FNDC3B-204ENST00000421757 POLLQ9UGP5 575 aa27.04■■□□□ 1.92
FNDC3B-204ENST00000421757 GJA3Q9Y6H8 435 aa27.04■■□□□ 1.92
FNDC3B-204ENST00000421757 ANKRD18BA2A2Z9 1011 aa27.03■■□□□ 1.92
FNDC3B-204ENST00000421757 RIMBP2O15034 1052 aa27.03■■□□□ 1.92
FNDC3B-204ENST00000421757 BRPF1P55201 1214 aaPredicted RBP27.03■■□□□ 1.92
FNDC3B-204ENST00000421757 LMBR1LQ6UX01 489 aa27.03■■□□□ 1.92
FNDC3B-204ENST00000421757 EYA3Q99504 573 aa27.03■■□□□ 1.92
FNDC3B-204ENST00000421757 API5Q9BZZ5 524 aaKnown RBP27.03■■□□□ 1.92
FNDC3B-204ENST00000421757 BSDC1Q9NW68 430 aaPredicted RBP27.03■■□□□ 1.92
FNDC3B-204ENST00000421757 WDR90Q96KV7 1748 aa27.02■■□□□ 1.92
FNDC3B-204ENST00000421757 KIF16BQ96L93 1317 aa27.02■■□□□ 1.92
FNDC3B-204ENST00000421757 POTECB2RU33 542 aa27.02■■□□□ 1.92
FNDC3B-204ENST00000421757 UFL1O94874 794 aa27.02■■□□□ 1.92
FNDC3B-204ENST00000421757 NBPF7P0C2Y1 421 aaPredicted RBP27.02■■□□□ 1.92
FNDC3B-204ENST00000421757 GPC2Q8N158 579 aa27.02■■□□□ 1.92
FNDC3B-204ENST00000421757 TBC1D16Q8TBP0 767 aa27.02■■□□□ 1.92
FNDC3B-204ENST00000421757 MPHOSPH8Q99549 860 aa27.02■■□□□ 1.92
FNDC3B-204ENST00000421757 PODXL2Q9NZ53 605 aa27.02■■□□□ 1.92
FNDC3B-204ENST00000421757 GGA1Q9UJY5 639 aa27.02■■□□□ 1.92
FNDC3B-204ENST00000421757 ZNRF3Q9ULT6 936 aa27.02■■□□□ 1.92
FNDC3B-204ENST00000421757 DUOX1Q9NRD9 1551 aa27.01■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms