RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 ATP6V0A2Q9Y487 856 aa12.23□□□□□ -0.45
NUP50-205ENST00000419387 ABCC4O15439 1325 aa12.22□□□□□ -0.45
NUP50-205ENST00000419387 ELL2O00472 640 aaPredicted RBP12.22□□□□□ -0.45
NUP50-205ENST00000419387 EIF6P56537 245 aaKnown RBP12.22□□□□□ -0.45
NUP50-205ENST00000419387 DDX46Q7L014 1031 aaKnown RBP12.22□□□□□ -0.45
NUP50-205ENST00000419387 SLC51AQ86UW1 340 aa12.22□□□□□ -0.45
NUP50-205ENST00000419387 LDHDQ86WU2 507 aa12.22□□□□□ -0.45
NUP50-205ENST00000419387 SP8Q8IXZ3 490 aa12.22□□□□□ -0.45
NUP50-205ENST00000419387 GPC2Q8N158 579 aa12.22□□□□□ -0.45
NUP50-205ENST00000419387 LARGE2Q8N3Y3 721 aa12.22□□□□□ -0.45
NUP50-205ENST00000419387 JMYQ8N9B5 988 aa12.22□□□□□ -0.45
NUP50-205ENST00000419387 VPS33BQ9H267 617 aa12.22□□□□□ -0.45
NUP50-205ENST00000419387 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.45
NUP50-205ENST00000419387 EPHX2P34913 555 aa12.21□□□□□ -0.45
NUP50-205ENST00000419387 TRIM28Q13263 835 aaKnown RBP12.21□□□□□ -0.45
NUP50-205ENST00000419387 MKRN4PQ13434 485 aaPredicted RBP12.21□□□□□ -0.45
NUP50-205ENST00000419387 RIC3Q7Z5B4 369 aa12.21□□□□□ -0.45
NUP50-205ENST00000419387 C8orf58Q8NAV2 365 aa12.21□□□□□ -0.45
NUP50-205ENST00000419387 ZNF428Q96B54 188 aa12.21□□□□□ -0.45
NUP50-205ENST00000419387 CHMP4AQ9BY43 222 aa12.21□□□□□ -0.45
NUP50-205ENST00000419387 PHAXQ9H814 394 aaKnown RBP12.21□□□□□ -0.45
NUP50-205ENST00000419387 ANKRD36CQ5JPF3 1778 aa12.2□□□□□ -0.46
NUP50-205ENST00000419387 PPIP5K2O43314 1243 aa12.2□□□□□ -0.46
NUP50-205ENST00000419387 GOLGA2Q08379 1002 aa12.2□□□□□ -0.46
NUP50-205ENST00000419387 GRAPQ13588 217 aa12.2□□□□□ -0.46
NUP50-205ENST00000419387 EAPPQ56P03 285 aaPredicted RBP12.2□□□□□ -0.46
NUP50-205ENST00000419387 PNMA8AQ86V59 439 aaPredicted RBP12.2□□□□□ -0.46
NUP50-205ENST00000419387 NIM1KQ8IY84 436 aa12.2□□□□□ -0.46
NUP50-205ENST00000419387 MPNDQ8N594 471 aa12.2□□□□□ -0.46
NUP50-205ENST00000419387 SUPT20HQ8NEM7 779 aa12.2□□□□□ -0.46
NUP50-205ENST00000419387 GRAPLQ8TC17 118 aaPredicted RBP12.2□□□□□ -0.46
NUP50-205ENST00000419387 FAM89AQ96GI7 184 aa12.2□□□□□ -0.46
NUP50-205ENST00000419387 RTFDC1Q9BY42 306 aaPredicted RBP12.2□□□□□ -0.46
NUP50-205ENST00000419387 GJA3Q9Y6H8 435 aa12.2□□□□□ -0.46
NUP50-205ENST00000419387 SCN4AP35499 1836 aa12.2□□□□□ -0.46
NUP50-205ENST00000419387 SF3B3Q15393 1217 aaKnown RBP12.19□□□□□ -0.46
NUP50-205ENST00000419387 AOC3Q16853 763 aa12.19□□□□□ -0.46
NUP50-205ENST00000419387 CCDC27Q2M243 656 aa12.19□□□□□ -0.46
NUP50-205ENST00000419387 DPP8Q6V1X1 898 aaPredicted RBP12.19□□□□□ -0.46
NUP50-205ENST00000419387 COL4A5P29400 1685 aa12.19□□□□□ -0.46
NUP50-205ENST00000419387 IFFO2Q5TF58 517 aa12.18□□□□□ -0.46
NUP50-205ENST00000419387 CCDC30Q5VVM6 783 aa12.18□□□□□ -0.46
NUP50-205ENST00000419387 TMC4Q7Z404 712 aa12.18□□□□□ -0.46
NUP50-205ENST00000419387 WWC1Q8IX03 1113 aa12.18□□□□□ -0.46
NUP50-205ENST00000419387 CREBZFQ9NS37 354 aa12.18□□□□□ -0.46
NUP50-205ENST00000419387 SSUH2Q9Y2M2 353 aa12.18□□□□□ -0.46
NUP50-205ENST00000419387 PASKQ96RG2 1323 aa12.17□□□□□ -0.46
NUP50-205ENST00000419387 IRS4O14654 1257 aaPredicted RBP12.17□□□□□ -0.46
NUP50-205ENST00000419387 ANP32CO43423 234 aa12.17□□□□□ -0.46
NUP50-205ENST00000419387 ITGBL1O95965 494 aaPredicted RBP12.17□□□□□ -0.46
NUP50-205ENST00000419387 LMOD1P29536 600 aaPredicted RBP12.17□□□□□ -0.46
NUP50-205ENST00000419387 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
NUP50-205ENST00000419387 TSPYL6Q8N831 410 aa12.17□□□□□ -0.46
NUP50-205ENST00000419387 ZBTB38Q8NAP3 1195 aaPredicted RBP12.17□□□□□ -0.46
NUP50-205ENST00000419387 MYD88Q99836 296 aa12.17□□□□□ -0.46
NUP50-205ENST00000419387 MRS2Q9HD23 443 aa12.17□□□□□ -0.46
NUP50-205ENST00000419387 ZNRF3Q9ULT6 936 aa12.17□□□□□ -0.46
NUP50-205ENST00000419387 LAMB2P55268 1798 aa12.17□□□□□ -0.46
NUP50-205ENST00000419387 DDX58O95786 925 aaKnown RBP12.16□□□□□ -0.46
NUP50-205ENST00000419387 EPS15P42566 896 aa12.16□□□□□ -0.46
NUP50-205ENST00000419387 SCNN1DP51172 638 aa12.16□□□□□ -0.46
NUP50-205ENST00000419387 KIAA2012Q0VF49 1180 aa12.16□□□□□ -0.46
NUP50-205ENST00000419387 CNTROBQ8N137 903 aa12.16□□□□□ -0.46
NUP50-205ENST00000419387 CCDC191Q8NCU4 936 aa12.16□□□□□ -0.46
NUP50-205ENST00000419387 CELF1Q92879 486 aaKnown RBP12.16□□□□□ -0.46
NUP50-205ENST00000419387 TSR2Q969E8 191 aaKnown RBP12.16□□□□□ -0.46
NUP50-205ENST00000419387 METTL22Q9BUU2 404 aaPredicted RBP12.16□□□□□ -0.46
NUP50-205ENST00000419387 PCCAP05165 728 aaPredicted RBP12.15□□□□□ -0.46
NUP50-205ENST00000419387 HSP90B1P14625 803 aaKnown RBP12.15□□□□□ -0.46
NUP50-205ENST00000419387 CXCL9Q07325 125 aa12.15□□□□□ -0.46
NUP50-205ENST00000419387 MAP1SQ66K74 1059 aaPredicted RBP12.15□□□□□ -0.46
NUP50-205ENST00000419387 IL16Q14005 1332 aa12.14□□□□□ -0.47
NUP50-205ENST00000419387 TMEM88BA6NKF7 163 aa12.14□□□□□ -0.47
NUP50-205ENST00000419387 RPS8P62241 208 aaKnown RBP12.14□□□□□ -0.47
NUP50-205ENST00000419387 CIAPIN1Q6FI81 312 aa12.14□□□□□ -0.47
NUP50-205ENST00000419387 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
NUP50-205ENST00000419387 STK31Q9BXU1 1019 aa12.14□□□□□ -0.47
NUP50-205ENST00000419387 CWC25Q9NXE8 425 aaPredicted RBP12.14□□□□□ -0.47
NUP50-205ENST00000419387 MKRN1Q9UHC7 482 aaKnown RBP12.14□□□□□ -0.47
NUP50-205ENST00000419387 NSFL1CQ9UNZ2 370 aaKnown RBP12.14□□□□□ -0.47
NUP50-205ENST00000419387 DDX60Q8IY21 1712 aaKnown RBP12.14□□□□□ -0.47
NUP50-205ENST00000419387 ADAMTSL1Q8N6G6 1762 aa12.13□□□□□ -0.47
NUP50-205ENST00000419387 TAF1P21675 1872 aa12.13□□□□□ -0.47
NUP50-205ENST00000419387 C19orf67A6NJJ6 358 aa12.13□□□□□ -0.47
NUP50-205ENST00000419387 PDE8AO60658 829 aa12.13□□□□□ -0.47
NUP50-205ENST00000419387 TNIP1Q15025 636 aa12.13□□□□□ -0.47
NUP50-205ENST00000419387 WASHC4Q2M389 1173 aa12.13□□□□□ -0.47
NUP50-205ENST00000419387 TWISTNBQ3B726 338 aaPredicted RBP12.13□□□□□ -0.47
NUP50-205ENST00000419387 KSR2Q6VAB6 950 aa12.13□□□□□ -0.47
NUP50-205ENST00000419387 GPRC5DQ9NZD1 345 aa12.13□□□□□ -0.47
NUP50-205ENST00000419387 MAP3K2Q9Y2U5 619 aa12.13□□□□□ -0.47
NUP50-205ENST00000419387 LTBP1Q14766 1721 aa12.12□□□□□ -0.47
NUP50-205ENST00000419387 PI4KAP2A4QPH2 592 aa12.12□□□□□ -0.47
NUP50-205ENST00000419387 C6orf229H3BNL8 230 aa12.12□□□□□ -0.47
NUP50-205ENST00000419387 RAD17O75943 681 aa12.12□□□□□ -0.47
NUP50-205ENST00000419387 GMPSP49915 693 aaPredicted RBP12.12□□□□□ -0.47
NUP50-205ENST00000419387 GPSM2P81274 684 aa12.12□□□□□ -0.47
NUP50-205ENST00000419387 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
NUP50-205ENST00000419387 WDR63Q8IWG1 891 aa12.12□□□□□ -0.47
NUP50-205ENST00000419387 PI4KAP1Q8N8J0 262 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms