RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 SUCLG2Q96I99 432 aa23.21■■□□□ 1.31
SEMA3B-202ENST00000418576 STYK1Q6J9G0 422 aa23.2■■□□□ 1.3
SEMA3B-202ENST00000418576 DDX60Q8IY21 1712 aaKnown RBP23.2■■□□□ 1.3
SEMA3B-202ENST00000418576 ALDH1B1P30837 517 aa23.19■■□□□ 1.3
SEMA3B-202ENST00000418576 DDX46Q7L014 1031 aaKnown RBP23.19■■□□□ 1.3
SEMA3B-202ENST00000418576 TTLL11Q8NHH1 800 aa23.19■■□□□ 1.3
SEMA3B-202ENST00000418576 PIM2Q9P1W9 311 aa23.19■■□□□ 1.3
SEMA3B-202ENST00000418576 TNRC6CQ9HCJ0 1690 aaKnown RBP23.19■■□□□ 1.3
SEMA3B-202ENST00000418576 LAMB2P55268 1798 aa23.19■■□□□ 1.3
SEMA3B-202ENST00000418576 GNAI2P04899 355 aa23.19■■□□□ 1.3
SEMA3B-202ENST00000418576 HOXA10P31260 410 aaPredicted RBP23.19■■□□□ 1.3
SEMA3B-202ENST00000418576 FOXO4P98177 505 aa23.19■■□□□ 1.3
SEMA3B-202ENST00000418576 CNKSR1Q969H4 720 aa23.19■■□□□ 1.3
SEMA3B-202ENST00000418576 CSF1RP07333 972 aa23.18■■□□□ 1.3
SEMA3B-202ENST00000418576 KCNA3P22001 575 aa23.18■■□□□ 1.3
SEMA3B-202ENST00000418576 BICC1Q9H694 974 aaKnown RBP23.18■■□□□ 1.3
SEMA3B-202ENST00000418576 LMBR1LQ6UX01 489 aa23.17■■□□□ 1.3
SEMA3B-202ENST00000418576 KAZALD1Q96I82 304 aa23.17■■□□□ 1.3
SEMA3B-202ENST00000418576 CCDC85AQ96PX6 553 aaPredicted RBP23.17■■□□□ 1.3
SEMA3B-202ENST00000418576 CRAMP1Q96RY5 1269 aa23.17■■□□□ 1.3
SEMA3B-202ENST00000418576 CHMP3Q9Y3E7 222 aa23.17■■□□□ 1.3
SEMA3B-202ENST00000418576 LRRFIP2Q9Y608 721 aaKnown RBP23.17■■□□□ 1.3
SEMA3B-202ENST00000418576 EPHA10Q5JZY3 1008 aa23.17■■□□□ 1.3
SEMA3B-202ENST00000418576 TTLL6Q8N841 843 aa23.17■■□□□ 1.3
SEMA3B-202ENST00000418576 RABL6Q3YEC7 729 aaPredicted RBP23.15■■□□□ 1.3
SEMA3B-202ENST00000418576 DALRD3Q5D0E6 543 aaKnown RBP23.14■■□□□ 1.3
SEMA3B-202ENST00000418576 GREM2Q9H772 168 aa23.14■■□□□ 1.3
SEMA3B-202ENST00000418576 RTL9Q8NET4 1388 aa23.14■■□□□ 1.29
SEMA3B-202ENST00000418576 IFIT5Q13325 482 aaKnown RBP23.14■■□□□ 1.29
SEMA3B-202ENST00000418576 CCDC57Q2TAC2 916 aa23.14■■□□□ 1.29
SEMA3B-202ENST00000418576 CDC5LQ99459 802 aaKnown RBP23.14■■□□□ 1.29
SEMA3B-202ENST00000418576 MYH3P11055 1940 aa23.13■■□□□ 1.29
SEMA3B-202ENST00000418576 ITGA6P23229 1130 aa23.13■■□□□ 1.29
SEMA3B-202ENST00000418576 GRAPQ13588 217 aa23.13■■□□□ 1.29
SEMA3B-202ENST00000418576 FAM161AQ3B820 660 aa23.13■■□□□ 1.29
SEMA3B-202ENST00000418576 ANKRD44Q8N8A2 993 aa23.13■■□□□ 1.29
SEMA3B-202ENST00000418576 GRAPLQ8TC17 118 aaPredicted RBP23.13■■□□□ 1.29
SEMA3B-202ENST00000418576 COL11A2P13942 1736 aaPredicted RBP23.13■■□□□ 1.29
SEMA3B-202ENST00000418576 KIAA1551Q9HCM1 1747 aa23.13■■□□□ 1.29
SEMA3B-202ENST00000418576 ANKRD18BA2A2Z9 1011 aa23.12■■□□□ 1.29
SEMA3B-202ENST00000418576 BBOX1O75936 387 aa23.12■■□□□ 1.29
SEMA3B-202ENST00000418576 SEC31BQ9NQW1 1179 aa23.12■■□□□ 1.29
SEMA3B-202ENST00000418576 ZBTB40Q9NUA8 1239 aa23.12■■□□□ 1.29
SEMA3B-202ENST00000418576 PRPF40BQ6NWY9 871 aaKnown RBP23.12■■□□□ 1.29
SEMA3B-202ENST00000418576 CRBNQ96SW2 442 aa23.12■■□□□ 1.29
SEMA3B-202ENST00000418576 WWC3Q9ULE0 1092 aa23.12■■□□□ 1.29
SEMA3B-202ENST00000418576 BCS1LQ9Y276 419 aa23.12■■□□□ 1.29
SEMA3B-202ENST00000418576 DLEC1Q9Y238 1755 aa23.11■■□□□ 1.29
SEMA3B-202ENST00000418576 RPS8P62241 208 aaKnown RBP23.11■■□□□ 1.29
SEMA3B-202ENST00000418576 TMX4Q9H1E5 349 aaPredicted RBP23.11■■□□□ 1.29
SEMA3B-202ENST00000418576 ANKRD18AQ8IVF6 992 aa23.1■■□□□ 1.29
SEMA3B-202ENST00000418576 C1orf115Q9H7X2 142 aa23.1■■□□□ 1.29
SEMA3B-202ENST00000418576 IGHMBP2P38935 993 aaKnown RBP23.09■■□□□ 1.29
SEMA3B-202ENST00000418576 TAF7LQ5H9L4 462 aa23.09■■□□□ 1.29
SEMA3B-202ENST00000418576 TMC4Q7Z404 712 aa23.09■■□□□ 1.29
SEMA3B-202ENST00000418576 CELF1Q92879 486 aaKnown RBP23.09■■□□□ 1.29
SEMA3B-202ENST00000418576 PPEF1O14829 653 aaPredicted RBP23.09■■□□□ 1.29
SEMA3B-202ENST00000418576 MTX1Q13505 466 aa23.08■■□□□ 1.29
SEMA3B-202ENST00000418576 SRGAP3O43295 1099 aa23.07■■□□□ 1.28
SEMA3B-202ENST00000418576 MPHOSPH8Q99549 860 aa23.07■■□□□ 1.28
SEMA3B-202ENST00000418576 AAMPQ13685 434 aa23.06■■□□□ 1.28
SEMA3B-202ENST00000418576 GPR162Q16538 588 aa23.06■■□□□ 1.28
SEMA3B-202ENST00000418576 SOGA3Q5TF21 947 aa23.06■■□□□ 1.28
SEMA3B-202ENST00000418576 BRCA1P38398 1863 aaKnown RBP23.05■■□□□ 1.28
SEMA3B-202ENST00000418576 DCAF8L1A6NGE4 600 aa23.05■■□□□ 1.28
SEMA3B-202ENST00000418576 C21orf2O43822 256 aa23.05■■□□□ 1.28
SEMA3B-202ENST00000418576 ATP8B2P98198 1209 aa23.05■■□□□ 1.28
SEMA3B-202ENST00000418576 CC2D2BQ6DHV5 1058 aa23.05■■□□□ 1.28
SEMA3B-202ENST00000418576 RPAP2Q8IXW5 612 aaPredicted RBP23.05■■□□□ 1.28
SEMA3B-202ENST00000418576 BSDC1Q9NW68 430 aaPredicted RBP23.05■■□□□ 1.28
SEMA3B-202ENST00000418576 ZNF219Q9P2Y4 722 aaPredicted RBP23.05■■□□□ 1.28
SEMA3B-202ENST00000418576 ATP6V0A2Q9Y487 856 aa23.05■■□□□ 1.28
SEMA3B-202ENST00000418576 SP8Q8IXZ3 490 aa23.04■■□□□ 1.28
SEMA3B-202ENST00000418576 IRX6P78412 446 aaPredicted RBP23.04■■□□□ 1.28
SEMA3B-202ENST00000418576 CEP85Q6P2H3 762 aa23.04■■□□□ 1.28
SEMA3B-202ENST00000418576 LDHAL6AQ6ZMR3 332 aa23.04■■□□□ 1.28
SEMA3B-202ENST00000418576 C7orf43Q8WVR3 580 aa23.04■■□□□ 1.28
SEMA3B-202ENST00000418576 SLX4Q8IY92 1834 aa23.03■■□□□ 1.28
SEMA3B-202ENST00000418576 GRIPAP1Q4V328 841 aa23.03■■□□□ 1.28
SEMA3B-202ENST00000418576 ZNF594Q96JF6 807 aaPredicted RBP23.03■■□□□ 1.28
SEMA3B-202ENST00000418576 GOLGB1Q14789 3259 aaKnown RBP23.03■■□□□ 1.28
SEMA3B-202ENST00000418576 PNMA6EA0A0J9YXQ4 647 aa23.01■■□□□ 1.27
SEMA3B-202ENST00000418576 RFX5P48382 616 aaPredicted RBP23.01■■□□□ 1.27
SEMA3B-202ENST00000418576 CCDC93Q567U6 631 aa23.01■■□□□ 1.27
SEMA3B-202ENST00000418576 EXOC6Q8TAG9 804 aa23.01■■□□□ 1.27
SEMA3B-202ENST00000418576 CNNM1Q9NRU3 951 aa23.01■■□□□ 1.27
SEMA3B-202ENST00000418576 GRIN3BO60391 1043 aa23.01■■□□□ 1.27
SEMA3B-202ENST00000418576 HMMRO75330 724 aa23.01■■□□□ 1.27
SEMA3B-202ENST00000418576 YBX3P16989 372 aaKnown RBP eCLIP23.01■■□□□ 1.27
SEMA3B-202ENST00000418576 RTKN2Q8IZC4 609 aa23.01■■□□□ 1.27
SEMA3B-202ENST00000418576 TAF1P21675 1872 aa23.01■■□□□ 1.27
SEMA3B-202ENST00000418576 CACNA1SQ13698 1873 aa23■■□□□ 1.27
SEMA3B-202ENST00000418576 NEFLP07196 543 aa23■■□□□ 1.27
SEMA3B-202ENST00000418576 PTPN12Q05209 780 aaKnown RBP23■■□□□ 1.27
SEMA3B-202ENST00000418576 SSH3Q8TE77 659 aa23■■□□□ 1.27
SEMA3B-202ENST00000418576 COPRSQ9NQ92 184 aa23■■□□□ 1.27
SEMA3B-202ENST00000418576 KLHDC4Q8TBB5 520 aa22.99■■□□□ 1.27
SEMA3B-202ENST00000418576 FBXO3Q9UK99 471 aa22.99■■□□□ 1.27
SEMA3B-202ENST00000418576 POLA2Q14181 598 aa22.99■■□□□ 1.27
SEMA3B-202ENST00000418576 MINPP1Q9UNW1 487 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms