RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 NIP7Q9Y221 180 aaKnown RBP eCLIP13□□□□□ -0.33
SMPD4P1-201ENST00000416717 EIF5BO60841 1220 aaKnown RBP12.99□□□□□ -0.33
SMPD4P1-201ENST00000416717 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
SMPD4P1-201ENST00000416717 TTLL11Q8NHH1 800 aa12.99□□□□□ -0.33
SMPD4P1-201ENST00000416717 EDC3Q96F86 508 aaKnown RBP12.99□□□□□ -0.33
SMPD4P1-201ENST00000416717 CCNL1Q9UK58 526 aaPredicted RBP12.99□□□□□ -0.33
SMPD4P1-201ENST00000416717 CICQ96RK0 1608 aaPredicted RBP12.99□□□□□ -0.33
SMPD4P1-201ENST00000416717 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
SMPD4P1-201ENST00000416717 CDHR2Q9BYE9 1310 aa12.99□□□□□ -0.33
SMPD4P1-201ENST00000416717 CTSWP56202 376 aa12.99□□□□□ -0.33
SMPD4P1-201ENST00000416717 PLA2G12BQ9BX93 195 aa12.99□□□□□ -0.33
SMPD4P1-201ENST00000416717 CD2BP2O95400 341 aaKnown RBP12.98□□□□□ -0.33
SMPD4P1-201ENST00000416717 CSF1RP07333 972 aa12.98□□□□□ -0.33
SMPD4P1-201ENST00000416717 ITGA6P23229 1130 aa12.98□□□□□ -0.33
SMPD4P1-201ENST00000416717 IL15P40933 162 aaPredicted RBP12.98□□□□□ -0.33
SMPD4P1-201ENST00000416717 BICDL1Q6ZP65 573 aa12.98□□□□□ -0.33
SMPD4P1-201ENST00000416717 HSCBQ8IWL3 235 aa12.98□□□□□ -0.33
SMPD4P1-201ENST00000416717 GNPATO15228 680 aa12.97□□□□□ -0.33
SMPD4P1-201ENST00000416717 ONECUT3O60422 494 aaPredicted RBP12.97□□□□□ -0.33
SMPD4P1-201ENST00000416717 DIAPH3Q9NSV4 1193 aa12.97□□□□□ -0.33
SMPD4P1-201ENST00000416717 PDE8AO60658 829 aa12.97□□□□□ -0.33
SMPD4P1-201ENST00000416717 EVI5LQ96CN4 794 aa12.97□□□□□ -0.33
SMPD4P1-201ENST00000416717 DNAJC2Q99543 621 aaKnown RBP12.97□□□□□ -0.33
SMPD4P1-201ENST00000416717 UTP14AQ9BVJ6 771 aaKnown RBP12.97□□□□□ -0.33
SMPD4P1-201ENST00000416717 SH3TC1Q8TE82 1336 aa12.96□□□□□ -0.33
SMPD4P1-201ENST00000416717 ZNF831Q5JPB2 1677 aa12.96□□□□□ -0.33
SMPD4P1-201ENST00000416717 TAF1LQ8IZX4 1826 aa12.96□□□□□ -0.33
SMPD4P1-201ENST00000416717 FSD1Q9BTV5 496 aa12.96□□□□□ -0.33
SMPD4P1-201ENST00000416717 CEP126Q9P2H0 1117 aa12.96□□□□□ -0.33
SMPD4P1-201ENST00000416717 SRP68Q9UHB9 627 aaKnown RBP12.96□□□□□ -0.33
SMPD4P1-201ENST00000416717 BCORQ6W2J9 1755 aa12.96□□□□□ -0.33
SMPD4P1-201ENST00000416717 ANKRD18BA2A2Z9 1011 aa12.96□□□□□ -0.34
SMPD4P1-201ENST00000416717 LDHAL6AQ6ZMR3 332 aa12.96□□□□□ -0.34
SMPD4P1-201ENST00000416717 SPEF2Q9C093 1822 aa12.95□□□□□ -0.34
SMPD4P1-201ENST00000416717 A0A1B0GUL7 405 aa12.95□□□□□ -0.34
SMPD4P1-201ENST00000416717 CIAO1O76071 339 aa12.95□□□□□ -0.34
SMPD4P1-201ENST00000416717 PHF14O94880 888 aa12.95□□□□□ -0.34
SMPD4P1-201ENST00000416717 AMIGO3Q86WK7 504 aa12.95□□□□□ -0.34
SMPD4P1-201ENST00000416717 CNNM1Q9NRU3 951 aa12.95□□□□□ -0.34
SMPD4P1-201ENST00000416717 ZNF652Q9Y2D9 606 aa12.95□□□□□ -0.34
SMPD4P1-201ENST00000416717 LY75O60449 1722 aa12.95□□□□□ -0.34
SMPD4P1-201ENST00000416717 CNTNAP4Q9C0A0 1308 aa12.95□□□□□ -0.34
SMPD4P1-201ENST00000416717 SGSM2O43147 1006 aa12.95□□□□□ -0.34
SMPD4P1-201ENST00000416717 USPL1Q5W0Q7 1092 aa12.95□□□□□ -0.34
SMPD4P1-201ENST00000416717 FAM227BQ96M60 508 aa12.95□□□□□ -0.34
SMPD4P1-201ENST00000416717 FOXD4L1Q9NU39 408 aa12.95□□□□□ -0.34
SMPD4P1-201ENST00000416717 PALD1Q9ULE6 856 aa12.95□□□□□ -0.34
SMPD4P1-201ENST00000416717 DDX60Q8IY21 1712 aaKnown RBP12.94□□□□□ -0.34
SMPD4P1-201ENST00000416717 ATP5JP18859 108 aa12.94□□□□□ -0.34
SMPD4P1-201ENST00000416717 PARP10Q53GL7 1025 aa12.94□□□□□ -0.34
SMPD4P1-201ENST00000416717 METTL24Q5JXM2 366 aa12.94□□□□□ -0.34
SMPD4P1-201ENST00000416717 TAF1P21675 1872 aa12.94□□□□□ -0.34
SMPD4P1-201ENST00000416717 ZNF609O15014 1411 aa12.94□□□□□ -0.34
SMPD4P1-201ENST00000416717 TRIM37O94972 964 aa12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 NTSR2O95665 410 aa12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 CHGBP05060 677 aa12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 ADORA1P30542 326 aa12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 NMIQ13287 307 aaPredicted RBP12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 DDX46Q7L014 1031 aaKnown RBP12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 SEC31BQ9NQW1 1179 aa12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 RPS6KA4O75676 772 aa12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 MCCP23508 829 aa12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 RABEP1Q15276 862 aa12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 GORABQ5T7V8 394 aa12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 TBC1D9BQ66K14 1250 aa12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 KIAA1211Q6ZU35 1233 aa12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 KRT27Q7Z3Y8 459 aa12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 HELBQ8NG08 1087 aaPredicted RBP12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 SNX21Q969T3 373 aa12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 RTCBQ9Y3I0 505 aaKnown RBP12.93□□□□□ -0.34
SMPD4P1-201ENST00000416717 RUFY2Q8WXA3 655 aa12.92□□□□□ -0.34
SMPD4P1-201ENST00000416717 BCL11BQ9C0K0 894 aaPredicted RBP12.92□□□□□ -0.34
SMPD4P1-201ENST00000416717 GPR108Q9NPR9 543 aa12.92□□□□□ -0.34
SMPD4P1-201ENST00000416717 CASZ1Q86V15 1759 aa12.92□□□□□ -0.34
SMPD4P1-201ENST00000416717 ZPR1O75312 459 aa12.92□□□□□ -0.34
SMPD4P1-201ENST00000416717 ERFEQ4G0M1 354 aa12.92□□□□□ -0.34
SMPD4P1-201ENST00000416717 RC3H1Q5TC82 1133 aaKnown RBP12.92□□□□□ -0.34
SMPD4P1-201ENST00000416717 CCDC24Q8N4L8 307 aa12.92□□□□□ -0.34
SMPD4P1-201ENST00000416717 XAGE2Q96GT9 111 aa12.92□□□□□ -0.34
SMPD4P1-201ENST00000416717 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
SMPD4P1-201ENST00000416717 LRRC4BQ9NT99 713 aa12.92□□□□□ -0.34
SMPD4P1-201ENST00000416717 RIPOR2Q9Y4F9 1068 aa12.92□□□□□ -0.34
SMPD4P1-201ENST00000416717 A0A0D9SFI3 127 aa12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 GOLIM4O00461 696 aa12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 GTF2E1P29083 439 aaPredicted RBP12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 PTH1RQ03431 593 aa12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 CLEC4GQ6UXB4 293 aa12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 FAM196AQ6ZSG2 479 aa12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 ARHGEF1Q92888 912 aaKnown RBP12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 HAUS7Q99871 368 aa12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 LSG1Q9H089 658 aaKnown RBP12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 RIC1Q4ADV7 1423 aa12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 C4BP0C0L5 1744 aa12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 HSP90AA1P07900 732 aaKnown RBP12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 AK7Q96M32 723 aa12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 SNRKQ9NRH2 765 aa12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 NARFQ9UHQ1 456 aa12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 AKAP2Q9Y2D5 859 aa12.91□□□□□ -0.34
SMPD4P1-201ENST00000416717 SCN7AQ01118 1682 aa12.9□□□□□ -0.34
SMPD4P1-201ENST00000416717 K7ELQ4 463 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms