RNA–Protein interactions for RNA: ENST00000416426.6

MSI2-203, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-203ENST00000416426 SIK1P57059 783 aa22.06■■□□□ 1.12
MSI2-203ENST00000416426 DZIP3Q86Y13 1208 aaKnown RBP22.06■■□□□ 1.12
MSI2-203ENST00000416426 KCNB2Q92953 911 aa22.06■■□□□ 1.12
MSI2-203ENST00000416426 FAM89AQ96GI7 184 aa22.06■■□□□ 1.12
MSI2-203ENST00000416426 MYH3P11055 1940 aa22.05■■□□□ 1.12
MSI2-203ENST00000416426 NMIQ13287 307 aaPredicted RBP22.05■■□□□ 1.12
MSI2-203ENST00000416426 LRRC24Q50LG9 513 aa22.05■■□□□ 1.12
MSI2-203ENST00000416426 FNBP4Q8N3X1 1017 aaPredicted RBP22.05■■□□□ 1.12
MSI2-203ENST00000416426 SMARCC1Q92922 1105 aaPredicted RBP22.05■■□□□ 1.12
MSI2-203ENST00000416426 ZNF594Q96JF6 807 aaPredicted RBP22.05■■□□□ 1.12
MSI2-203ENST00000416426 HAUS7Q99871 368 aa22.05■■□□□ 1.12
MSI2-203ENST00000416426 SNX14Q9Y5W7 946 aa22.05■■□□□ 1.12
MSI2-203ENST00000416426 COL5A3P25940 1745 aaPredicted RBP22.04■■□□□ 1.12
MSI2-203ENST00000416426 PALLDQ8WX93 1383 aa22.04■■□□□ 1.12
MSI2-203ENST00000416426 CCDC57Q2TAC2 916 aa22.04■■□□□ 1.12
MSI2-203ENST00000416426 ZNF34Q8IZ26 560 aa22.04■■□□□ 1.12
MSI2-203ENST00000416426 FSD1Q9BTV5 496 aa22.04■■□□□ 1.12
MSI2-203ENST00000416426 FOXD4L1Q9NU39 408 aa22.04■■□□□ 1.12
MSI2-203ENST00000416426 GPTP24298 496 aa22.03■■□□□ 1.12
MSI2-203ENST00000416426 ATP6V1AP38606 617 aa22.03■■□□□ 1.12
MSI2-203ENST00000416426 ARXQ96QS3 562 aa22.03■■□□□ 1.12
MSI2-203ENST00000416426 CWC22Q9HCG8 908 aaKnown RBP22.03■■□□□ 1.12
MSI2-203ENST00000416426 MED23Q9ULK4 1368 aa22.03■■□□□ 1.12
MSI2-203ENST00000416426 CCDC171Q6TFL3 1326 aa22.03■■□□□ 1.12
MSI2-203ENST00000416426 CRKLP46109 303 aaKnown RBP22.03■■□□□ 1.12
MSI2-203ENST00000416426 PTH1RQ03431 593 aa22.03■■□□□ 1.12
MSI2-203ENST00000416426 ITPK1Q13572 414 aa22.03■■□□□ 1.12
MSI2-203ENST00000416426 TICAM2Q86XR7 235 aa22.03■■□□□ 1.12
MSI2-203ENST00000416426 MYH14Q7Z406 1995 aaKnown RBP22.02■■□□□ 1.12
MSI2-203ENST00000416426 FAM98CQ17RN3 349 aaKnown RBP22.02■■□□□ 1.12
MSI2-203ENST00000416426 FAM227BQ96M60 508 aa22.02■■□□□ 1.12
MSI2-203ENST00000416426 PUS3Q9BZE2 481 aaKnown RBP22.02■■□□□ 1.12
MSI2-203ENST00000416426 SPEF2Q9C093 1822 aa22.01■■□□□ 1.11
MSI2-203ENST00000416426 CUL4AQ13619 759 aa22.01■■□□□ 1.11
MSI2-203ENST00000416426 TNPO1Q92973 898 aaKnown RBP22.01■■□□□ 1.11
MSI2-203ENST00000416426 TBC1D2BQ9UPU7 963 aa22.01■■□□□ 1.11
MSI2-203ENST00000416426 THSD7AQ9UPZ6 1657 aa22.01■■□□□ 1.11
MSI2-203ENST00000416426 A0A0D9SFI3 127 aa22■■□□□ 1.11
MSI2-203ENST00000416426 RASEFQ8IZ41 740 aa22■■□□□ 1.11
MSI2-203ENST00000416426 TMX3Q96JJ7 454 aa22■■□□□ 1.11
MSI2-203ENST00000416426 UBN2Q6ZU65 1347 aa22■■□□□ 1.11
MSI2-203ENST00000416426 IFIT5Q13325 482 aaKnown RBP22■■□□□ 1.11
MSI2-203ENST00000416426 NECTIN1Q15223 517 aa22■■□□□ 1.11
MSI2-203ENST00000416426 SYNE4Q8N205 404 aa22■■□□□ 1.11
MSI2-203ENST00000416426 TTLL11Q8NHH1 800 aa22■■□□□ 1.11
MSI2-203ENST00000416426 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22■■□□□ 1.11
MSI2-203ENST00000416426 MAP4K1Q92918 833 aa22■■□□□ 1.11
MSI2-203ENST00000416426 CEP126Q9P2H0 1117 aa22■■□□□ 1.11
MSI2-203ENST00000416426 CTSWP56202 376 aa21.99■■□□□ 1.11
MSI2-203ENST00000416426 CLEC17AQ6ZS10 378 aa21.99■■□□□ 1.11
MSI2-203ENST00000416426 EDC3Q96F86 508 aaKnown RBP21.99■■□□□ 1.11
MSI2-203ENST00000416426 QTRT2Q9H974 415 aaKnown RBP21.99■■□□□ 1.11
MSI2-203ENST00000416426 USP21Q9UK80 565 aa21.99■■□□□ 1.11
MSI2-203ENST00000416426 IRS4O14654 1257 aaPredicted RBP21.98■■□□□ 1.11
MSI2-203ENST00000416426 KCNQ2O43526 872 aa21.98■■□□□ 1.11
MSI2-203ENST00000416426 TIMM10P62072 90 aa21.98■■□□□ 1.11
MSI2-203ENST00000416426 AK7Q96M32 723 aa21.98■■□□□ 1.11
MSI2-203ENST00000416426 NEUROD6Q96NK8 337 aa21.98■■□□□ 1.11
MSI2-203ENST00000416426 TM6SF1Q9BZW5 370 aa21.98■■□□□ 1.11
MSI2-203ENST00000416426 TRMT112Q9UI30 125 aaKnown RBP21.98■■□□□ 1.11
MSI2-203ENST00000416426 BCORQ6W2J9 1755 aa21.98■■□□□ 1.11
MSI2-203ENST00000416426 A0A0G2JS52 829 aa21.97■■□□□ 1.11
MSI2-203ENST00000416426 A0A1B0GUL7 405 aa21.97■■□□□ 1.11
MSI2-203ENST00000416426 PDE8AO60658 829 aa21.97■■□□□ 1.11
MSI2-203ENST00000416426 CAMTA2O94983 1202 aa21.97■■□□□ 1.11
MSI2-203ENST00000416426 CYP2E1P05181 493 aaPredicted RBP21.97■■□□□ 1.11
MSI2-203ENST00000416426 NUCB2P80303 420 aa21.97■■□□□ 1.11
MSI2-203ENST00000416426 GSE1Q14687 1217 aa21.97■■□□□ 1.11
MSI2-203ENST00000416426 TTC14Q96N46 770 aa21.97■■□□□ 1.11
MSI2-203ENST00000416426 UPF3BQ9BZI7 483 aaKnown RBP21.97■■□□□ 1.11
MSI2-203ENST00000416426 AKAP2Q9Y2D5 859 aa21.97■■□□□ 1.11
MSI2-203ENST00000416426 RIC1Q4ADV7 1423 aa21.97■■□□□ 1.11
MSI2-203ENST00000416426 LRP5O75197 1615 aa21.97■■□□□ 1.11
MSI2-203ENST00000416426 KBTBD3Q8NAB2 608 aa21.97■■□□□ 1.11
MSI2-203ENST00000416426 DDX11L8A8MPP1 907 aa21.96■■□□□ 1.11
MSI2-203ENST00000416426 RXRBP28702 533 aa21.96■■□□□ 1.11
MSI2-203ENST00000416426 INTS4Q96HW7 963 aaKnown RBP21.96■■□□□ 1.11
MSI2-203ENST00000416426 GBP4Q96PP9 640 aa21.96■■□□□ 1.11
MSI2-203ENST00000416426 RIPOR2Q9Y4F9 1068 aa21.96■■□□□ 1.11
MSI2-203ENST00000416426 RBM8AQ9Y5S9 174 aaKnown RBP21.96■■□□□ 1.11
MSI2-203ENST00000416426 LAMB2P55268 1798 aa21.95■■□□□ 1.1
MSI2-203ENST00000416426 TAF7LQ5H9L4 462 aa21.95■■□□□ 1.1
MSI2-203ENST00000416426 PRPF40BQ6NWY9 871 aaKnown RBP21.95■■□□□ 1.1
MSI2-203ENST00000416426 ZGPATQ8N5A5 531 aaKnown RBP21.95■■□□□ 1.1
MSI2-203ENST00000416426 DNAJC2Q99543 621 aaKnown RBP21.95■■□□□ 1.1
MSI2-203ENST00000416426 GREM2Q9H772 168 aa21.95■■□□□ 1.1
MSI2-203ENST00000416426 ANKRD18BA2A2Z9 1011 aa21.94■■□□□ 1.1
MSI2-203ENST00000416426 ITGA6P23229 1130 aa21.94■■□□□ 1.1
MSI2-203ENST00000416426 SSFA2P28290 1259 aa21.94■■□□□ 1.1
MSI2-203ENST00000416426 PARP10Q53GL7 1025 aa21.94■■□□□ 1.1
MSI2-203ENST00000416426 CREB3L3Q68CJ9 461 aa21.94■■□□□ 1.1
MSI2-203ENST00000416426 CCDC85AQ96PX6 553 aaPredicted RBP21.94■■□□□ 1.1
MSI2-203ENST00000416426 PAG1Q9NWQ8 432 aa21.94■■□□□ 1.1
MSI2-203ENST00000416426 NHSQ6T4R5 1651 aa21.94■■□□□ 1.1
MSI2-203ENST00000416426 TAF5LO75529 589 aa21.93■■□□□ 1.1
MSI2-203ENST00000416426 SUSD4Q5VX71 490 aa21.93■■□□□ 1.1
MSI2-203ENST00000416426 ZNF589Q86UQ0 364 aaPredicted RBP21.93■■□□□ 1.1
MSI2-203ENST00000416426 ZSWIM6Q9HCJ5 1215 aa21.93■■□□□ 1.1
MSI2-203ENST00000416426 NDUFB9Q9Y6M9 179 aa21.93■■□□□ 1.1
MSI2-203ENST00000416426 DDX60Q8IY21 1712 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms