RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 FOXO4P98177 505 aa38.49■■■■□ 3.75
CSNK1E-206ENST00000413574 SF3B3Q15393 1217 aaKnown RBP38.49■■■■□ 3.75
CSNK1E-206ENST00000413574 RPGRQ92834 1020 aaKnown RBP38.49■■■■□ 3.75
CSNK1E-206ENST00000413574 MASTLQ96GX5 879 aa38.49■■■■□ 3.75
CSNK1E-206ENST00000413574 PDZRN3Q9UPQ7 1066 aa38.49■■■■□ 3.75
CSNK1E-206ENST00000413574 UBTFL1P0CB47 393 aaPredicted RBP38.48■■■■□ 3.75
CSNK1E-206ENST00000413574 NPR1P16066 1061 aa38.48■■■■□ 3.75
CSNK1E-206ENST00000413574 MVPQ14764 893 aaKnown RBP38.47■■■■□ 3.75
CSNK1E-206ENST00000413574 TTLL11Q8NHH1 800 aa38.47■■■■□ 3.75
CSNK1E-206ENST00000413574 UTRNP46939 3433 aa38.45■■■■□ 3.75
CSNK1E-206ENST00000413574 STYK1Q6J9G0 422 aa38.45■■■■□ 3.75
CSNK1E-206ENST00000413574 BICC1Q9H694 974 aaKnown RBP38.45■■■■□ 3.75
CSNK1E-206ENST00000413574 PIM2Q9P1W9 311 aa38.45■■■■□ 3.75
CSNK1E-206ENST00000413574 COL4A1P02462 1669 aa38.44■■■■□ 3.74
CSNK1E-206ENST00000413574 ZBTB7BO15156 539 aaPredicted RBP38.44■■■■□ 3.74
CSNK1E-206ENST00000413574 SLX4Q8IY92 1834 aa38.43■■■■□ 3.74
CSNK1E-206ENST00000413574 HOXA10P31260 410 aaPredicted RBP38.43■■■■□ 3.74
CSNK1E-206ENST00000413574 RBM17Q96I25 401 aaKnown RBP38.43■■■■□ 3.74
CSNK1E-206ENST00000413574 LRRFIP2Q9Y608 721 aaKnown RBP38.43■■■■□ 3.74
CSNK1E-206ENST00000413574 GNAI3P08754 354 aa38.42■■■■□ 3.74
CSNK1E-206ENST00000413574 CCDC152Q4G0S7 254 aa38.42■■■■□ 3.74
CSNK1E-206ENST00000413574 LMBR1LQ6UX01 489 aa38.42■■■■□ 3.74
CSNK1E-206ENST00000413574 GREM2Q9H772 168 aa38.42■■■■□ 3.74
CSNK1E-206ENST00000413574 SEC31BQ9NQW1 1179 aa38.42■■■■□ 3.74
CSNK1E-206ENST00000413574 CSF1RP07333 972 aa38.41■■■■□ 3.74
CSNK1E-206ENST00000413574 DDX46Q7L014 1031 aaKnown RBP38.4■■■■□ 3.74
CSNK1E-206ENST00000413574 TTLL6Q8N841 843 aa38.4■■■■□ 3.74
CSNK1E-206ENST00000413574 ANKRD44Q8N8A2 993 aa38.4■■■■□ 3.74
CSNK1E-206ENST00000413574 CHMP3Q9Y3E7 222 aa38.4■■■■□ 3.74
CSNK1E-206ENST00000413574 FAM161AQ3B820 660 aa38.39■■■■□ 3.74
CSNK1E-206ENST00000413574 CNKSR1Q969H4 720 aa38.38■■■■□ 3.74
CSNK1E-206ENST00000413574 CRAMP1Q96RY5 1269 aa38.38■■■■□ 3.74
CSNK1E-206ENST00000413574 DDX19BQ9UMR2 479 aa38.38■■■■□ 3.74
CSNK1E-206ENST00000413574 DALRD3Q5D0E6 543 aaKnown RBP38.38■■■■□ 3.73
CSNK1E-206ENST00000413574 PELP1Q8IZL8 1130 aaKnown RBP38.38■■■■□ 3.73
CSNK1E-206ENST00000413574 C1orf115Q9H7X2 142 aa38.38■■■■□ 3.73
CSNK1E-206ENST00000413574 BCS1LQ9Y276 419 aa38.38■■■■□ 3.73
CSNK1E-206ENST00000413574 ALDH1B1P30837 517 aa38.37■■■■□ 3.73
CSNK1E-206ENST00000413574 PRPF40BQ6NWY9 871 aaKnown RBP38.37■■■■□ 3.73
CSNK1E-206ENST00000413574 CELF1Q92879 486 aaKnown RBP38.37■■■■□ 3.73
CSNK1E-206ENST00000413574 SLC51AQ86UW1 340 aa38.36■■■■□ 3.73
CSNK1E-206ENST00000413574 SPEF2Q9C093 1822 aa38.35■■■■□ 3.73
CSNK1E-206ENST00000413574 CENPBP07199 599 aaPredicted RBP38.35■■■■□ 3.73
CSNK1E-206ENST00000413574 RABL6Q3YEC7 729 aaPredicted RBP38.35■■■■□ 3.73
CSNK1E-206ENST00000413574 ZNF219Q9P2Y4 722 aaPredicted RBP38.35■■■■□ 3.73
CSNK1E-206ENST00000413574 GNAI2P04899 355 aa38.34■■■■□ 3.73
CSNK1E-206ENST00000413574 ITGA6P23229 1130 aa38.34■■■■□ 3.73
CSNK1E-206ENST00000413574 GRAPQ13588 217 aa38.34■■■■□ 3.73
CSNK1E-206ENST00000413574 GRAPLQ8TC17 118 aaPredicted RBP38.34■■■■□ 3.73
CSNK1E-206ENST00000413574 YBX3P16989 372 aaKnown RBP eCLIP38.33■■■■□ 3.733e-7■□□□□ 10.1
CSNK1E-206ENST00000413574 CRBNQ96SW2 442 aa38.33■■■■□ 3.73
CSNK1E-206ENST00000413574 RTL9Q8NET4 1388 aa38.33■■■■□ 3.73
CSNK1E-206ENST00000413574 ARFGEF1Q9Y6D6 1849 aa38.32■■■■□ 3.73
CSNK1E-206ENST00000413574 HDAC5Q9UQL6 1122 aa38.31■■■■□ 3.72
CSNK1E-206ENST00000413574 OLFM4Q6UX06 510 aa38.3■■■■□ 3.72
CSNK1E-206ENST00000413574 ZBTB40Q9NUA8 1239 aa38.3■■■■□ 3.72
CSNK1E-206ENST00000413574 C21orf2O43822 256 aa38.29■■■■□ 3.72
CSNK1E-206ENST00000413574 IRX6P78412 446 aaPredicted RBP38.29■■■■□ 3.72
CSNK1E-206ENST00000413574 PPEF1O14829 653 aaPredicted RBP38.28■■■■□ 3.72
CSNK1E-206ENST00000413574 RPS8P62241 208 aaKnown RBP38.28■■■■□ 3.72
CSNK1E-206ENST00000413574 IFIT5Q13325 482 aaKnown RBP38.28■■■■□ 3.72
CSNK1E-206ENST00000413574 ANKRD18BA2A2Z9 1011 aa38.27■■■■□ 3.72
CSNK1E-206ENST00000413574 GPR162Q16538 588 aa38.27■■■■□ 3.72
CSNK1E-206ENST00000413574 ZNF594Q96JF6 807 aaPredicted RBP38.27■■■■□ 3.72
CSNK1E-206ENST00000413574 CCDC57Q2TAC2 916 aa38.27■■■■□ 3.72
CSNK1E-206ENST00000413574 C7orf43Q8WVR3 580 aa38.27■■■■□ 3.72
CSNK1E-206ENST00000413574 BBOX1O75936 387 aa38.26■■■■□ 3.71
CSNK1E-206ENST00000413574 CDC5LQ99459 802 aaKnown RBP38.26■■■■□ 3.71
CSNK1E-206ENST00000413574 ANKRD18AQ8IVF6 992 aa38.25■■■■□ 3.71
CSNK1E-206ENST00000413574 KLHDC4Q8TBB5 520 aa38.23■■■■□ 3.71
CSNK1E-206ENST00000413574 CHMP4BQ9H444 224 aaKnown RBP38.22■■■■□ 3.71
CSNK1E-206ENST00000413574 PNMA6EA0A0J9YXQ4 647 aa38.21■■■■□ 3.71
CSNK1E-206ENST00000413574 ATP6V0A2Q9Y487 856 aa38.21■■■■□ 3.71
CSNK1E-206ENST00000413574 SRGAP3O43295 1099 aa38.2■■■■□ 3.71
CSNK1E-206ENST00000413574 RFX5P48382 616 aaPredicted RBP38.2■■■■□ 3.71
CSNK1E-206ENST00000413574 TAF7LQ5H9L4 462 aa38.2■■■■□ 3.71
CSNK1E-206ENST00000413574 IGHMBP2P38935 993 aaKnown RBP38.2■■■■□ 3.7
CSNK1E-206ENST00000413574 MTX1Q13505 466 aa38.2■■■■□ 3.7
CSNK1E-206ENST00000413574 LRRC37AA6NMS7 1700 aa38.19■■■■□ 3.7
CSNK1E-206ENST00000413574 SP8Q8IXZ3 490 aa38.18■■■■□ 3.7
CSNK1E-206ENST00000413574 EXOC6Q8TAG9 804 aa38.18■■■■□ 3.7
CSNK1E-206ENST00000413574 CEP85Q6P2H3 762 aa38.17■■■■□ 3.7
CSNK1E-206ENST00000413574 MPHOSPH8Q99549 860 aa38.17■■■■□ 3.7
CSNK1E-206ENST00000413574 ATP8B2P98198 1209 aa38.16■■■■□ 3.7
CSNK1E-206ENST00000413574 BSDC1Q9NW68 430 aaPredicted RBP38.16■■■■□ 3.7
CSNK1E-206ENST00000413574 PUS3Q9BZE2 481 aaKnown RBP38.16■■■■□ 3.7
CSNK1E-206ENST00000413574 FER1L6Q2WGJ9 1857 aa38.15■■■■□ 3.7
CSNK1E-206ENST00000413574 PTPN12Q05209 780 aaKnown RBP38.15■■■■□ 3.7
CSNK1E-206ENST00000413574 TMC4Q7Z404 712 aa38.15■■■■□ 3.7
CSNK1E-206ENST00000413574 PA2G4Q9UQ80 394 aaKnown RBP38.15■■■■□ 3.7
CSNK1E-206ENST00000413574 LDHAL6AQ6ZMR3 332 aa38.14■■■■□ 3.7
CSNK1E-206ENST00000413574 ARHGAP27Q6ZUM4 889 aa38.14■■■■□ 3.7
CSNK1E-206ENST00000413574 CCDC93Q567U6 631 aa38.13■■■■□ 3.69
CSNK1E-206ENST00000413574 SNED1Q8TER0 1413 aa38.13■■■■□ 3.69
CSNK1E-206ENST00000413574 LRRC24Q50LG9 513 aa38.12■■■■□ 3.69
CSNK1E-206ENST00000413574 MINPP1Q9UNW1 487 aa38.12■■■■□ 3.69
CSNK1E-206ENST00000413574 SIL1Q9H173 461 aa38.11■■■■□ 3.69
CSNK1E-206ENST00000413574 TMX4Q9H1E5 349 aaPredicted RBP38.11■■■■□ 3.69
CSNK1E-206ENST00000413574 CNNM1Q9NRU3 951 aa38.11■■■■□ 3.69
CSNK1E-206ENST00000413574 GPSM2P81274 684 aa38.1■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms