RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 NBPF7P0C2Y1 421 aaPredicted RBP11.19□□□□□ -0.62
HCG18-234ENST00000413358 LMNB1P20700 586 aa11.19□□□□□ -0.62
HCG18-234ENST00000413358 GTF2E1P29083 439 aaPredicted RBP11.19□□□□□ -0.62
HCG18-234ENST00000413358 NFIXQ14938 502 aa11.19□□□□□ -0.62
HCG18-234ENST00000413358 SUSD4Q5VX71 490 aa11.19□□□□□ -0.62
HCG18-234ENST00000413358 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
HCG18-234ENST00000413358 TTLL6Q8N841 843 aa11.19□□□□□ -0.62
HCG18-234ENST00000413358 LRRFIP2Q9Y608 721 aaKnown RBP11.19□□□□□ -0.62
HCG18-234ENST00000413358 LAMB2P55268 1798 aa11.18□□□□□ -0.62
HCG18-234ENST00000413358 HSP90B1P14625 803 aaKnown RBP11.18□□□□□ -0.62
HCG18-234ENST00000413358 C2CD5Q86YS7 1000 aa11.18□□□□□ -0.62
HCG18-234ENST00000413358 DNAJC5GQ8N7S2 189 aa11.18□□□□□ -0.62
HCG18-234ENST00000413358 CNBD1Q8NA66 436 aa11.18□□□□□ -0.62
HCG18-234ENST00000413358 JARID2Q92833 1246 aaPredicted RBP11.18□□□□□ -0.62
HCG18-234ENST00000413358 KLRG1Q96E93 195 aa11.18□□□□□ -0.62
HCG18-234ENST00000413358 FAM89AQ96GI7 184 aa11.18□□□□□ -0.62
HCG18-234ENST00000413358 SUCLG2Q96I99 432 aa11.18□□□□□ -0.62
HCG18-234ENST00000413358 PDZRN3Q9UPQ7 1066 aa11.18□□□□□ -0.62
HCG18-234ENST00000413358 KIAA1551Q9HCM1 1747 aa11.18□□□□□ -0.62
HCG18-234ENST00000413358 CDHR2Q9BYE9 1310 aa11.17□□□□□ -0.62
HCG18-234ENST00000413358 ARFGEF1Q9Y6D6 1849 aa11.17□□□□□ -0.62
HCG18-234ENST00000413358 H7C1W4 665 aa11.17□□□□□ -0.62
HCG18-234ENST00000413358 IRS4O14654 1257 aaPredicted RBP11.17□□□□□ -0.62
HCG18-234ENST00000413358 VEGFAP15692 232 aaPredicted RBP11.17□□□□□ -0.62
HCG18-234ENST00000413358 ST5P78524 1137 aa11.17□□□□□ -0.62
HCG18-234ENST00000413358 NUTM1Q86Y26 1132 aa11.17□□□□□ -0.62
HCG18-234ENST00000413358 CCDC136Q96JN2 1154 aa11.17□□□□□ -0.62
HCG18-234ENST00000413358 BICC1Q9H694 974 aaKnown RBP11.17□□□□□ -0.62
HCG18-234ENST00000413358 PPP4R2Q9NY27 417 aa11.17□□□□□ -0.62
HCG18-234ENST00000413358 CHMP3Q9Y3E7 222 aa11.17□□□□□ -0.62
HCG18-234ENST00000413358 ABCC12Q96J65 1359 aa11.16□□□□□ -0.62
HCG18-234ENST00000413358 GLTPD2A6NH11 291 aa11.16□□□□□ -0.62
HCG18-234ENST00000413358 HMMRO75330 724 aa11.16□□□□□ -0.62
HCG18-234ENST00000413358 PDE6BP35913 854 aa11.16□□□□□ -0.62
HCG18-234ENST00000413358 CASP7P55210 303 aa11.16□□□□□ -0.62
HCG18-234ENST00000413358 RASSF7Q02833 373 aa11.16□□□□□ -0.62
HCG18-234ENST00000413358 CEP85Q6P2H3 762 aa11.16□□□□□ -0.62
HCG18-234ENST00000413358 TPTE2Q6XPS3 522 aa11.16□□□□□ -0.62
HCG18-234ENST00000413358 ZNF622Q969S3 477 aaKnown RBP eCLIP11.16□□□□□ -0.62
HCG18-234ENST00000413358 CEP350Q5VT06 3117 aa11.15□□□□□ -0.62
HCG18-234ENST00000413358 PDE8AO60658 829 aa11.15□□□□□ -0.62
HCG18-234ENST00000413358 CTSWP56202 376 aa11.15□□□□□ -0.62
HCG18-234ENST00000413358 ERFEQ4G0M1 354 aa11.15□□□□□ -0.62
HCG18-234ENST00000413358 PCDHB15Q9Y5E8 787 aa11.15□□□□□ -0.62
HCG18-234ENST00000413358 DDX60Q8IY21 1712 aaKnown RBP11.15□□□□□ -0.63
HCG18-234ENST00000413358 BRCA1P38398 1863 aaKnown RBP11.15□□□□□ -0.63
HCG18-234ENST00000413358 MYH3P11055 1940 aa11.14□□□□□ -0.63
HCG18-234ENST00000413358 SRGAP3O43295 1099 aa11.14□□□□□ -0.63
HCG18-234ENST00000413358 HCLS1P14317 486 aaPredicted RBP11.14□□□□□ -0.63
HCG18-234ENST00000413358 PRR5LQ6MZQ0 368 aa11.14□□□□□ -0.63
HCG18-234ENST00000413358 RPAP2Q8IXW5 612 aaPredicted RBP11.14□□□□□ -0.63
HCG18-234ENST00000413358 SYNE4Q8N205 404 aa11.14□□□□□ -0.63
HCG18-234ENST00000413358 ANKRD44Q8N8A2 993 aa11.14□□□□□ -0.63
HCG18-234ENST00000413358 PLA2G12BQ9BX93 195 aa11.14□□□□□ -0.63
HCG18-234ENST00000413358 RIC1Q4ADV7 1423 aa11.14□□□□□ -0.63
HCG18-234ENST00000413358 NRXN2Q9P2S2 1712 aa11.13□□□□□ -0.63
HCG18-234ENST00000413358 HTRA3P83110 453 aa11.13□□□□□ -0.63
HCG18-234ENST00000413358 CCDC152Q4G0S7 254 aa11.13□□□□□ -0.63
HCG18-234ENST00000413358 EPHA10Q5JZY3 1008 aa11.13□□□□□ -0.63
HCG18-234ENST00000413358 B4GALNT3Q6L9W6 998 aa11.13□□□□□ -0.63
HCG18-234ENST00000413358 LMBR1LQ6UX01 489 aa11.13□□□□□ -0.63
HCG18-234ENST00000413358 CCDC24Q8N4L8 307 aa11.13□□□□□ -0.63
HCG18-234ENST00000413358 JMYQ8N9B5 988 aa11.13□□□□□ -0.63
HCG18-234ENST00000413358 BRIP1Q9BX63 1249 aa11.13□□□□□ -0.63
HCG18-234ENST00000413358 RWDD1Q9H446 243 aaPredicted RBP11.13□□□□□ -0.63
HCG18-234ENST00000413358 TNRC6CQ9HCJ0 1690 aaKnown RBP11.13□□□□□ -0.63
HCG18-234ENST00000413358 WDR90Q96KV7 1748 aa11.12□□□□□ -0.63
HCG18-234ENST00000413358 PNMA6EA0A0J9YXQ4 647 aa11.12□□□□□ -0.63
HCG18-234ENST00000413358 FOXO4P98177 505 aa11.12□□□□□ -0.63
HCG18-234ENST00000413358 MTX1Q13505 466 aa11.12□□□□□ -0.63
HCG18-234ENST00000413358 HDAC1Q13547 482 aaPredicted RBP11.12□□□□□ -0.63
HCG18-234ENST00000413358 FAM161AQ3B820 660 aa11.12□□□□□ -0.63
HCG18-234ENST00000413358 RABL6Q3YEC7 729 aaPredicted RBP11.12□□□□□ -0.63
HCG18-234ENST00000413358 TAF7LQ5H9L4 462 aa11.12□□□□□ -0.63
HCG18-234ENST00000413358 SOGA3Q5TF21 947 aa11.12□□□□□ -0.63
HCG18-234ENST00000413358 CNKSR1Q969H4 720 aa11.12□□□□□ -0.63
HCG18-234ENST00000413358 KAZALD1Q96I82 304 aa11.12□□□□□ -0.63
HCG18-234ENST00000413358 CCDC85AQ96PX6 553 aaPredicted RBP11.12□□□□□ -0.63
HCG18-234ENST00000413358 ZNF219Q9P2Y4 722 aaPredicted RBP11.12□□□□□ -0.63
HCG18-234ENST00000413358 C21orf2O43822 256 aa11.11□□□□□ -0.63
HCG18-234ENST00000413358 ATP8B2P98198 1209 aa11.11□□□□□ -0.63
HCG18-234ENST00000413358 CCDC57Q2TAC2 916 aa11.11□□□□□ -0.63
HCG18-234ENST00000413358 TNS4Q8IZW8 715 aa11.11□□□□□ -0.63
HCG18-234ENST00000413358 NLRP3Q96P20 1036 aa11.11□□□□□ -0.63
HCG18-234ENST00000413358 ANKRD18BA2A2Z9 1011 aa11.1□□□□□ -0.63
HCG18-234ENST00000413358 IFIT5Q13325 482 aaKnown RBP11.1□□□□□ -0.63
HCG18-234ENST00000413358 OS9Q13438 667 aaPredicted RBP11.1□□□□□ -0.63
HCG18-234ENST00000413358 CENPQQ7L2Z9 268 aaPredicted RBP11.1□□□□□ -0.63
HCG18-234ENST00000413358 SIRT2Q8IXJ6 389 aa11.1□□□□□ -0.63
HCG18-234ENST00000413358 TTLL11Q8NHH1 800 aa11.1□□□□□ -0.63
HCG18-234ENST00000413358 SSH3Q8TE77 659 aa11.1□□□□□ -0.63
HCG18-234ENST00000413358 TAOK3Q9H2K8 898 aa11.1□□□□□ -0.63
HCG18-234ENST00000413358 GREM2Q9H772 168 aa11.1□□□□□ -0.63
HCG18-234ENST00000413358 SBF1O95248 1867 aa11.09□□□□□ -0.63
HCG18-234ENST00000413358 RTL9Q8NET4 1388 aa11.09□□□□□ -0.63
HCG18-234ENST00000413358 CSF1RP07333 972 aa11.09□□□□□ -0.63
HCG18-234ENST00000413358 ITGA6P23229 1130 aa11.09□□□□□ -0.63
HCG18-234ENST00000413358 POLA2Q14181 598 aa11.09□□□□□ -0.63
HCG18-234ENST00000413358 SLC10A5Q5PT55 438 aa11.09□□□□□ -0.63
HCG18-234ENST00000413358 C3orf67Q6ZVT6 689 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms