RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 TAF1P21675 1872 aa19.48■□□□□ 0.71
TRAPPC12-203ENST00000411973 CTSWP56202 376 aa19.48■□□□□ 0.71
TRAPPC12-203ENST00000411973 CCDC152Q4G0S7 254 aa19.48■□□□□ 0.71
TRAPPC12-203ENST00000411973 DDX46Q7L014 1031 aaKnown RBP19.48■□□□□ 0.71
TRAPPC12-203ENST00000411973 C7orf43Q8WVR3 580 aa19.48■□□□□ 0.71
TRAPPC12-203ENST00000411973 TNNQ9UQP3 1299 aa19.48■□□□□ 0.71
TRAPPC12-203ENST00000411973 RTL9Q8NET4 1388 aa19.47■□□□□ 0.71
TRAPPC12-203ENST00000411973 CSF1RP07333 972 aa19.47■□□□□ 0.71
TRAPPC12-203ENST00000411973 NBPF7P0C2Y1 421 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC12-203ENST00000411973 TTLL11Q8NHH1 800 aa19.47■□□□□ 0.71
TRAPPC12-203ENST00000411973 BBOX1O75936 387 aa19.46■□□□□ 0.71
TRAPPC12-203ENST00000411973 FOXO4P98177 505 aa19.46■□□□□ 0.71
TRAPPC12-203ENST00000411973 GRAPQ13588 217 aa19.46■□□□□ 0.71
TRAPPC12-203ENST00000411973 GRAPLQ8TC17 118 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC12-203ENST00000411973 CLUAP1Q96AJ1 413 aa19.46■□□□□ 0.71
TRAPPC12-203ENST00000411973 SOGA3Q5TF21 947 aa19.45■□□□□ 0.7
TRAPPC12-203ENST00000411973 DZIP1LQ8IYY4 767 aaKnown RBP19.45■□□□□ 0.7
TRAPPC12-203ENST00000411973 KAZALD1Q96I82 304 aa19.45■□□□□ 0.7
TRAPPC12-203ENST00000411973 FER1L6Q2WGJ9 1857 aa19.45■□□□□ 0.7
TRAPPC12-203ENST00000411973 C21orf2O43822 256 aa19.44■□□□□ 0.7
TRAPPC12-203ENST00000411973 MS4A1P11836 297 aa19.44■□□□□ 0.7
TRAPPC12-203ENST00000411973 TMC4Q7Z404 712 aa19.44■□□□□ 0.7
TRAPPC12-203ENST00000411973 FTSJ3Q8IY81 847 aaKnown RBP19.44■□□□□ 0.7
TRAPPC12-203ENST00000411973 CHD4Q14839 1912 aa19.44■□□□□ 0.7
TRAPPC12-203ENST00000411973 PPEF1O14829 653 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC12-203ENST00000411973 RLBP1P12271 317 aa19.43■□□□□ 0.7
TRAPPC12-203ENST00000411973 EPHA10Q5JZY3 1008 aa19.43■□□□□ 0.7
TRAPPC12-203ENST00000411973 CC2D2BQ6DHV5 1058 aa19.43■□□□□ 0.7
TRAPPC12-203ENST00000411973 TMEM57Q8N5G2 664 aa19.43■□□□□ 0.7
TRAPPC12-203ENST00000411973 SUCLG2Q96I99 432 aa19.43■□□□□ 0.7
TRAPPC12-203ENST00000411973 GREM2Q9H772 168 aa19.43■□□□□ 0.7
TRAPPC12-203ENST00000411973 SEC31BQ9NQW1 1179 aa19.43■□□□□ 0.7
TRAPPC12-203ENST00000411973 RPS8P62241 208 aaKnown RBP19.42■□□□□ 0.7
TRAPPC12-203ENST00000411973 CELF1Q92879 486 aaKnown RBP19.42■□□□□ 0.7
TRAPPC12-203ENST00000411973 ATP6V0A2Q9Y487 856 aa19.42■□□□□ 0.7
TRAPPC12-203ENST00000411973 COL4A1P02462 1669 aa19.42■□□□□ 0.7
TRAPPC12-203ENST00000411973 SNED1Q8TER0 1413 aa19.42■□□□□ 0.7
TRAPPC12-203ENST00000411973 RABL6Q3YEC7 729 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC12-203ENST00000411973 GRIPAP1Q4V328 841 aa19.41■□□□□ 0.7
TRAPPC12-203ENST00000411973 CCDC93Q567U6 631 aa19.41■□□□□ 0.7
TRAPPC12-203ENST00000411973 LMBR1LQ6UX01 489 aa19.41■□□□□ 0.7
TRAPPC12-203ENST00000411973 ARHGAP27Q6ZUM4 889 aa19.41■□□□□ 0.7
TRAPPC12-203ENST00000411973 SP8Q8IXZ3 490 aa19.41■□□□□ 0.7
TRAPPC12-203ENST00000411973 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC12-203ENST00000411973 CCDC85AQ96PX6 553 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC12-203ENST00000411973 ZNF219Q9P2Y4 722 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC12-203ENST00000411973 HDAC5Q9UQL6 1122 aa19.41■□□□□ 0.7
TRAPPC12-203ENST00000411973 LRRC37AA6NMS7 1700 aa19.4■□□□□ 0.7
TRAPPC12-203ENST00000411973 SBF1O95248 1867 aa19.4■□□□□ 0.7
TRAPPC12-203ENST00000411973 GNAI3P08754 354 aa19.4■□□□□ 0.7
TRAPPC12-203ENST00000411973 UBTFL1P0CB47 393 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC12-203ENST00000411973 RTKN2Q8IZC4 609 aa19.4■□□□□ 0.7
TRAPPC12-203ENST00000411973 CDC5LQ99459 802 aaKnown RBP19.4■□□□□ 0.7
TRAPPC12-203ENST00000411973 MEIS3Q99687 375 aa19.4■□□□□ 0.7
TRAPPC12-203ENST00000411973 BICC1Q9H694 974 aaKnown RBP19.4■□□□□ 0.7
TRAPPC12-203ENST00000411973 PLIN1O60240 522 aa19.39■□□□□ 0.69
TRAPPC12-203ENST00000411973 ITGA6P23229 1130 aa19.39■□□□□ 0.69
TRAPPC12-203ENST00000411973 FAM161AQ3B820 660 aa19.39■□□□□ 0.69
TRAPPC12-203ENST00000411973 OLFM4Q6UX06 510 aa19.39■□□□□ 0.69
TRAPPC12-203ENST00000411973 ANKRD44Q8N8A2 993 aa19.39■□□□□ 0.69
TRAPPC12-203ENST00000411973 LTBP3Q9NS15 1303 aa19.39■□□□□ 0.69
TRAPPC12-203ENST00000411973 NFKBIEO00221 500 aa19.38■□□□□ 0.69
TRAPPC12-203ENST00000411973 PDE3AQ14432 1141 aa19.38■□□□□ 0.69
TRAPPC12-203ENST00000411973 ANKRD18AQ8IVF6 992 aa19.38■□□□□ 0.69
TRAPPC12-203ENST00000411973 PANK1Q8TE04 598 aa19.38■□□□□ 0.69
TRAPPC12-203ENST00000411973 TMX4Q9H1E5 349 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC12-203ENST00000411973 ANKRD18BA2A2Z9 1011 aa19.37■□□□□ 0.69
TRAPPC12-203ENST00000411973 IFIT5Q13325 482 aaKnown RBP19.37■□□□□ 0.69
TRAPPC12-203ENST00000411973 ITPRIPQ8IWB1 547 aa19.37■□□□□ 0.69
TRAPPC12-203ENST00000411973 CCDC88AQ3V6T2 1871 aa19.37■□□□□ 0.69
TRAPPC12-203ENST00000411973 ZBTB7BO15156 539 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC12-203ENST00000411973 CCDC57Q2TAC2 916 aa19.36■□□□□ 0.69
TRAPPC12-203ENST00000411973 PSMD1Q99460 953 aa19.36■□□□□ 0.69
TRAPPC12-203ENST00000411973 TAOK3Q9H2K8 898 aa19.36■□□□□ 0.69
TRAPPC12-203ENST00000411973 BSDC1Q9NW68 430 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC12-203ENST00000411973 CHMP3Q9Y3E7 222 aa19.36■□□□□ 0.69
TRAPPC12-203ENST00000411973 SPEF2Q9C093 1822 aa19.35■□□□□ 0.69
TRAPPC12-203ENST00000411973 IGHMBP2P38935 993 aaKnown RBP19.35■□□□□ 0.69
TRAPPC12-203ENST00000411973 FKBP4Q02790 459 aaKnown RBP eCLIP19.35■□□□□ 0.69
TRAPPC12-203ENST00000411973 SLC51AQ86UW1 340 aa19.35■□□□□ 0.69
TRAPPC12-203ENST00000411973 LRRFIP2Q9Y608 721 aaKnown RBP19.35■□□□□ 0.69
TRAPPC12-203ENST00000411973 DICER1Q9UPY3 1922 aaKnown RBP19.34■□□□□ 0.69
TRAPPC12-203ENST00000411973 GNAI2P04899 355 aa19.34■□□□□ 0.69
TRAPPC12-203ENST00000411973 RASSF7Q02833 373 aa19.34■□□□□ 0.69
TRAPPC12-203ENST00000411973 MVPQ14764 893 aaKnown RBP19.34■□□□□ 0.69
TRAPPC12-203ENST00000411973 LTBP1Q14766 1721 aa19.34■□□□□ 0.69
TRAPPC12-203ENST00000411973 LMNB1P20700 586 aa19.33■□□□□ 0.68
TRAPPC12-203ENST00000411973 PRELPP51888 382 aa19.33■□□□□ 0.68
TRAPPC12-203ENST00000411973 RRP1P56182 461 aaKnown RBP19.33■□□□□ 0.68
TRAPPC12-203ENST00000411973 MPNDQ8N594 471 aa19.33■□□□□ 0.68
TRAPPC12-203ENST00000411973 RTFDC1Q9BY42 306 aaPredicted RBP19.33■□□□□ 0.68
TRAPPC12-203ENST00000411973 DDX19BQ9UMR2 479 aa19.33■□□□□ 0.68
TRAPPC12-203ENST00000411973 MTX1Q13505 466 aa19.32■□□□□ 0.68
TRAPPC12-203ENST00000411973 C20orf194Q5TEA3 1177 aa19.32■□□□□ 0.68
TRAPPC12-203ENST00000411973 MPHOSPH8Q99549 860 aa19.32■□□□□ 0.68
TRAPPC12-203ENST00000411973 PODXL2Q9NZ53 605 aa19.32■□□□□ 0.68
TRAPPC12-203ENST00000411973 COG6Q9Y2V7 657 aa19.32■□□□□ 0.68
TRAPPC12-203ENST00000411973 DPP8Q6V1X1 898 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC12-203ENST00000411973 MINPP1Q9UNW1 487 aa19.31■□□□□ 0.68
TRAPPC12-203ENST00000411973 DUOX1Q9NRD9 1551 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms