RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 TAF1P21675 1872 aa6.77□□□□□ -1.33
EPHA4-202ENST00000409854 COL4A1P02462 1669 aa6.77□□□□□ -1.33
EPHA4-202ENST00000409854 IRS4O14654 1257 aaPredicted RBP6.77□□□□□ -1.33
EPHA4-202ENST00000409854 PDE8AO60658 829 aa6.77□□□□□ -1.33
EPHA4-202ENST00000409854 ANP32AP39687 249 aaKnown RBP6.77□□□□□ -1.33
EPHA4-202ENST00000409854 RTL5Q5HYW3 569 aaPredicted RBP6.77□□□□□ -1.33
EPHA4-202ENST00000409854 TTLL11Q8NHH1 800 aa6.77□□□□□ -1.33
EPHA4-202ENST00000409854 EAF2Q96CJ1 260 aaPredicted RBP6.77□□□□□ -1.33
EPHA4-202ENST00000409854 SIL1Q9H173 461 aa6.77□□□□□ -1.33
EPHA4-202ENST00000409854 TRMT112Q9UI30 125 aaKnown RBP6.77□□□□□ -1.33
EPHA4-202ENST00000409854 SH3TC1Q8TE82 1336 aa6.77□□□□□ -1.33
EPHA4-202ENST00000409854 AKAP11Q9UKA4 1901 aa6.77□□□□□ -1.33
EPHA4-202ENST00000409854 GNPATO15228 680 aa6.77□□□□□ -1.33
EPHA4-202ENST00000409854 RXRBP28702 533 aa6.77□□□□□ -1.33
EPHA4-202ENST00000409854 AMIGO3Q86WK7 504 aa6.77□□□□□ -1.33
EPHA4-202ENST00000409854 SYNE4Q8N205 404 aa6.77□□□□□ -1.33
EPHA4-202ENST00000409854 UTP14AQ9BVJ6 771 aaKnown RBP6.77□□□□□ -1.33
EPHA4-202ENST00000409854 EYA2O00167 538 aa6.76□□□□□ -1.33
EPHA4-202ENST00000409854 IL15P40933 162 aaPredicted RBP6.76□□□□□ -1.33
EPHA4-202ENST00000409854 TSHZ3Q63HK5 1081 aa6.76□□□□□ -1.33
EPHA4-202ENST00000409854 AACSQ86V21 672 aa6.76□□□□□ -1.33
EPHA4-202ENST00000409854 ECHDC1Q9NTX5 307 aa6.76□□□□□ -1.33
EPHA4-202ENST00000409854 NIP7Q9Y221 180 aaKnown RBP eCLIP6.76□□□□□ -1.33
EPHA4-202ENST00000409854 RTCBQ9Y3I0 505 aaKnown RBP6.76□□□□□ -1.33
EPHA4-202ENST00000409854 PLSCR1O15162 318 aa6.76□□□□□ -1.33
EPHA4-202ENST00000409854 GLRX3O76003 335 aaKnown RBP6.76□□□□□ -1.33
EPHA4-202ENST00000409854 TRIM37O94972 964 aa6.76□□□□□ -1.33
EPHA4-202ENST00000409854 HMGB2P26583 209 aaKnown RBP6.76□□□□□ -1.33
EPHA4-202ENST00000409854 TFCP2Q12800 502 aa6.76□□□□□ -1.33
EPHA4-202ENST00000409854 TNNI3KQ59H18 835 aa6.76□□□□□ -1.33
EPHA4-202ENST00000409854 UPF2Q9HAU5 1272 aaKnown RBP6.76□□□□□ -1.33
EPHA4-202ENST00000409854 FPGT-TNNI3KV9GXZ4 949 aa6.76□□□□□ -1.33
EPHA4-202ENST00000409854 EP400Q96L91 3159 aa6.76□□□□□ -1.33
EPHA4-202ENST00000409854 DOCK2Q92608 1830 aa6.76□□□□□ -1.33
EPHA4-202ENST00000409854 ERC2O15083 957 aa6.75□□□□□ -1.33
EPHA4-202ENST00000409854 IFIT2P09913 472 aaKnown RBP6.75□□□□□ -1.33
EPHA4-202ENST00000409854 RBM25P49756 843 aaKnown RBP6.75□□□□□ -1.33
EPHA4-202ENST00000409854 CCDC57Q2TAC2 916 aa6.75□□□□□ -1.33
EPHA4-202ENST00000409854 ARHGEF1Q92888 912 aaKnown RBP6.75□□□□□ -1.33
EPHA4-202ENST00000409854 GPATCH3Q96I76 525 aa6.75□□□□□ -1.33
EPHA4-202ENST00000409854 CHMP3Q9Y3E7 222 aa6.75□□□□□ -1.33
EPHA4-202ENST00000409854 HSP90B1P14625 803 aaKnown RBP6.75□□□□□ -1.33
EPHA4-202ENST00000409854 IFIT5Q13325 482 aaKnown RBP6.75□□□□□ -1.33
EPHA4-202ENST00000409854 USPL1Q5W0Q7 1092 aa6.75□□□□□ -1.33
EPHA4-202ENST00000409854 IPO9Q96P70 1041 aaKnown RBP6.75□□□□□ -1.33
EPHA4-202ENST00000409854 GREM2Q9H772 168 aa6.75□□□□□ -1.33
EPHA4-202ENST00000409854 ANO8Q9HCE9 1232 aaPredicted RBP6.75□□□□□ -1.33
EPHA4-202ENST00000409854 TLR7Q9NYK1 1049 aaKnown RBP6.75□□□□□ -1.33
EPHA4-202ENST00000409854 ANKRD31Q8N7Z5 1873 aa6.75□□□□□ -1.33
EPHA4-202ENST00000409854 ITGA6P23229 1130 aa6.75□□□□□ -1.33
EPHA4-202ENST00000409854 MFAP1P55081 439 aaKnown RBP6.75□□□□□ -1.33
EPHA4-202ENST00000409854 LRRC24Q50LG9 513 aa6.75□□□□□ -1.33
EPHA4-202ENST00000409854 TBC1D9BQ66K14 1250 aa6.75□□□□□ -1.33
EPHA4-202ENST00000409854 PROM2Q8N271 834 aa6.75□□□□□ -1.33
EPHA4-202ENST00000409854 ZNF594Q96JF6 807 aaPredicted RBP6.75□□□□□ -1.33
EPHA4-202ENST00000409854 DBNLQ9UJU6 430 aaKnown RBP6.75□□□□□ -1.33
EPHA4-202ENST00000409854 SSFA2P28290 1259 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 SLC10A5Q5PT55 438 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 POTEAQ6S8J7 498 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 PUS3Q9BZE2 481 aaKnown RBP6.74□□□□□ -1.33
EPHA4-202ENST00000409854 C22orf23Q9BZE7 217 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 SRP68Q9UHB9 627 aaKnown RBP6.74□□□□□ -1.33
EPHA4-202ENST00000409854 ABCC12Q96J65 1359 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 MYH13Q9UKX3 1938 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 ANKRD18BA2A2Z9 1011 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 TXNRD1Q16881 649 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 CASC1Q6TDU7 716 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 DDRGK1Q96HY6 314 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 CCDC8Q9H0W5 538 aaPredicted RBP6.74□□□□□ -1.33
EPHA4-202ENST00000409854 RIPOR2Q9Y4F9 1068 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 RFX7Q2KHR2 1363 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 LRRC37AA6NMS7 1700 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 MYO5AQ9Y4I1 1855 aaKnown RBP6.74□□□□□ -1.33
EPHA4-202ENST00000409854 ZPR1O75312 459 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 ATP5JP18859 108 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 CHMLP26374 656 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 TRAPPC3LQ5T215 181 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 SMIM5Q71RC9 77 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 CNTROBQ8N137 903 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 VGLL2Q8N8G2 317 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 NYXQ9GZU5 481 aa6.74□□□□□ -1.33
EPHA4-202ENST00000409854 CARMIL3Q8ND23 1372 aa6.73□□□□□ -1.33
EPHA4-202ENST00000409854 PDIA4P13667 645 aaKnown RBP6.73□□□□□ -1.33
EPHA4-202ENST00000409854 SF3B3Q15393 1217 aaKnown RBP6.73□□□□□ -1.33
EPHA4-202ENST00000409854 EPB41L2O43491 1005 aaKnown RBP6.73□□□□□ -1.33
EPHA4-202ENST00000409854 HCLS1P14317 486 aaPredicted RBP6.73□□□□□ -1.33
EPHA4-202ENST00000409854 ESYT1Q9BSJ8 1104 aa6.73□□□□□ -1.33
EPHA4-202ENST00000409854 TRIM6-TRIM34B2RNG4 842 aa6.73□□□□□ -1.33
EPHA4-202ENST00000409854 RFC4P35249 363 aa6.73□□□□□ -1.33
EPHA4-202ENST00000409854 ERFEQ4G0M1 354 aa6.73□□□□□ -1.33
EPHA4-202ENST00000409854 CCDC152Q4G0S7 254 aa6.73□□□□□ -1.33
EPHA4-202ENST00000409854 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.73□□□□□ -1.33
EPHA4-202ENST00000409854 RILPL2Q969X0 211 aa6.73□□□□□ -1.33
EPHA4-202ENST00000409854 AKT1S1Q96B36 256 aa6.73□□□□□ -1.33
EPHA4-202ENST00000409854 EVI5LQ96CN4 794 aa6.73□□□□□ -1.33
EPHA4-202ENST00000409854 DBNDD2Q9BQY9 259 aa6.73□□□□□ -1.33
EPHA4-202ENST00000409854 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.72□□□□□ -1.33
EPHA4-202ENST00000409854 MSH5O43196 834 aa6.72□□□□□ -1.33
EPHA4-202ENST00000409854 GLIPR1L2Q4G1C9 344 aa6.72□□□□□ -1.33
EPHA4-202ENST00000409854 TICAM2Q86XR7 235 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms