RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 DDX46Q7L014 1031 aaKnown RBP22.84■■□□□ 1.25
PAX3-208ENST00000409828 JARID2Q92833 1246 aaPredicted RBP22.84■■□□□ 1.25
PAX3-208ENST00000409828 SLX4Q8IY92 1834 aa22.84■■□□□ 1.25
PAX3-208ENST00000409828 DCAF8L1A6NGE4 600 aa22.83■■□□□ 1.25
PAX3-208ENST00000409828 TMEM57Q8N5G2 664 aa22.83■■□□□ 1.25
PAX3-208ENST00000409828 TTLL11Q8NHH1 800 aa22.83■■□□□ 1.25
PAX3-208ENST00000409828 TNNQ9UQP3 1299 aa22.83■■□□□ 1.25
PAX3-208ENST00000409828 GOLGB1Q14789 3259 aaKnown RBP22.83■■□□□ 1.25
PAX3-208ENST00000409828 BBOX1O75936 387 aa22.82■■□□□ 1.24
PAX3-208ENST00000409828 GNAI3P08754 354 aa22.82■■□□□ 1.24
PAX3-208ENST00000409828 TMC4Q7Z404 712 aa22.82■■□□□ 1.24
PAX3-208ENST00000409828 GRIN3BO60391 1043 aa22.81■■□□□ 1.24
PAX3-208ENST00000409828 RLBP1P12271 317 aa22.81■■□□□ 1.24
PAX3-208ENST00000409828 FOXO4P98177 505 aa22.81■■□□□ 1.24
PAX3-208ENST00000409828 SOGA3Q5TF21 947 aa22.81■■□□□ 1.24
PAX3-208ENST00000409828 PRPF40BQ6NWY9 871 aaKnown RBP22.81■■□□□ 1.24
PAX3-208ENST00000409828 BCS1LQ9Y276 419 aa22.81■■□□□ 1.24
PAX3-208ENST00000409828 UBTFL1P0CB47 393 aaPredicted RBP22.8■■□□□ 1.24
PAX3-208ENST00000409828 GRAPQ13588 217 aa22.8■■□□□ 1.24
PAX3-208ENST00000409828 RABL6Q3YEC7 729 aaPredicted RBP22.8■■□□□ 1.24
PAX3-208ENST00000409828 CC2D2BQ6DHV5 1058 aa22.8■■□□□ 1.24
PAX3-208ENST00000409828 GRAPLQ8TC17 118 aaPredicted RBP22.8■■□□□ 1.24
PAX3-208ENST00000409828 C7orf43Q8WVR3 580 aa22.8■■□□□ 1.24
PAX3-208ENST00000409828 KAZALD1Q96I82 304 aa22.8■■□□□ 1.24
PAX3-208ENST00000409828 TAF1P21675 1872 aa22.79■■□□□ 1.24
PAX3-208ENST00000409828 GPR162Q16538 588 aa22.79■■□□□ 1.24
PAX3-208ENST00000409828 GRIPAP1Q4V328 841 aa22.79■■□□□ 1.24
PAX3-208ENST00000409828 SUCLG2Q96I99 432 aa22.79■■□□□ 1.24
PAX3-208ENST00000409828 YBX3P16989 372 aaKnown RBP eCLIP22.78■■□□□ 1.24
PAX3-208ENST00000409828 RRP1P56182 461 aaKnown RBP22.78■■□□□ 1.24
PAX3-208ENST00000409828 MEIS3Q99687 375 aa22.78■■□□□ 1.24
PAX3-208ENST00000409828 CHMP4BQ9H444 224 aaKnown RBP22.78■■□□□ 1.24
PAX3-208ENST00000409828 PLIN1O60240 522 aa22.77■■□□□ 1.24
PAX3-208ENST00000409828 MVPQ14764 893 aaKnown RBP22.77■■□□□ 1.24
PAX3-208ENST00000409828 EPHA10Q5JZY3 1008 aa22.77■■□□□ 1.24
PAX3-208ENST00000409828 ITPRIPQ8IWB1 547 aa22.77■■□□□ 1.24
PAX3-208ENST00000409828 PANK1Q8TE04 598 aa22.77■■□□□ 1.24
PAX3-208ENST00000409828 CDC5LQ99459 802 aaKnown RBP22.77■■□□□ 1.24
PAX3-208ENST00000409828 FER1L6Q2WGJ9 1857 aa22.77■■□□□ 1.24
PAX3-208ENST00000409828 ZBTB7BO15156 539 aaPredicted RBP22.76■■□□□ 1.23
PAX3-208ENST00000409828 RPS8P62241 208 aaKnown RBP22.76■■□□□ 1.23
PAX3-208ENST00000409828 LMBR1LQ6UX01 489 aa22.76■■□□□ 1.23
PAX3-208ENST00000409828 GREM2Q9H772 168 aa22.76■■□□□ 1.23
PAX3-208ENST00000409828 DDX19BQ9UMR2 479 aa22.76■■□□□ 1.23
PAX3-208ENST00000409828 LRRC37AA6NMS7 1700 aa22.76■■□□□ 1.23
PAX3-208ENST00000409828 SP8Q8IXZ3 490 aa22.75■■□□□ 1.23
PAX3-208ENST00000409828 BICC1Q9H694 974 aaKnown RBP22.75■■□□□ 1.23
PAX3-208ENST00000409828 ATP6V0A2Q9Y487 856 aa22.75■■□□□ 1.23
PAX3-208ENST00000409828 UTRNP46939 3433 aa22.74■■□□□ 1.23
PAX3-208ENST00000409828 PPEF1O14829 653 aaPredicted RBP22.74■■□□□ 1.23
PAX3-208ENST00000409828 ITGA6P23229 1130 aa22.74■■□□□ 1.23
PAX3-208ENST00000409828 ANKRD44Q8N8A2 993 aa22.74■■□□□ 1.23
PAX3-208ENST00000409828 CELF1Q92879 486 aaKnown RBP22.74■■□□□ 1.23
PAX3-208ENST00000409828 SEC31BQ9NQW1 1179 aa22.74■■□□□ 1.23
PAX3-208ENST00000409828 ANKRD18BA2A2Z9 1011 aa22.73■■□□□ 1.23
PAX3-208ENST00000409828 GNAI2P04899 355 aa22.73■■□□□ 1.23
PAX3-208ENST00000409828 IFIT5Q13325 482 aaKnown RBP22.73■■□□□ 1.23
PAX3-208ENST00000409828 MTX1Q13505 466 aa22.73■■□□□ 1.23
PAX3-208ENST00000409828 FAM161AQ3B820 660 aa22.73■■□□□ 1.23
PAX3-208ENST00000409828 ANKRD18AQ8IVF6 992 aa22.73■■□□□ 1.23
PAX3-208ENST00000409828 PELP1Q8IZL8 1130 aaKnown RBP22.73■■□□□ 1.23
PAX3-208ENST00000409828 TMX4Q9H1E5 349 aaPredicted RBP22.73■■□□□ 1.23
PAX3-208ENST00000409828 SNED1Q8TER0 1413 aa22.73■■□□□ 1.23
PAX3-208ENST00000409828 C21orf2O43822 256 aa22.72■■□□□ 1.23
PAX3-208ENST00000409828 CCDC57Q2TAC2 916 aa22.72■■□□□ 1.23
PAX3-208ENST00000409828 CCDC93Q567U6 631 aa22.72■■□□□ 1.23
PAX3-208ENST00000409828 RTKN2Q8IZC4 609 aa22.72■■□□□ 1.23
PAX3-208ENST00000409828 LRRFIP2Q9Y608 721 aaKnown RBP22.72■■□□□ 1.23
PAX3-208ENST00000409828 CHD4Q14839 1912 aa22.72■■□□□ 1.23
PAX3-208ENST00000409828 CCDC85AQ96PX6 553 aaPredicted RBP22.71■■□□□ 1.23
PAX3-208ENST00000409828 BSDC1Q9NW68 430 aaPredicted RBP22.71■■□□□ 1.23
PAX3-208ENST00000409828 WWC3Q9ULE0 1092 aa22.71■■□□□ 1.23
PAX3-208ENST00000409828 COG6Q9Y2V7 657 aa22.71■■□□□ 1.23
PAX3-208ENST00000409828 LTBP3Q9NS15 1303 aa22.71■■□□□ 1.23
PAX3-208ENST00000409828 IGHMBP2P38935 993 aaKnown RBP22.7■■□□□ 1.22
PAX3-208ENST00000409828 C20orf194Q5TEA3 1177 aa22.7■■□□□ 1.22
PAX3-208ENST00000409828 COL4A1P02462 1669 aa22.7■■□□□ 1.22
PAX3-208ENST00000409828 SBF1O95248 1867 aa22.69■■□□□ 1.22
PAX3-208ENST00000409828 CHMP3Q9Y3E7 222 aa22.69■■□□□ 1.22
PAX3-208ENST00000409828 SPEF2Q9C093 1822 aa22.68■■□□□ 1.22
PAX3-208ENST00000409828 PSMD1Q99460 953 aa22.68■■□□□ 1.22
PAX3-208ENST00000409828 ZBTB40Q9NUA8 1239 aa22.68■■□□□ 1.22
PAX3-208ENST00000409828 ARHGAP27Q6ZUM4 889 aa22.67■■□□□ 1.22
PAX3-208ENST00000409828 MPHOSPH8Q99549 860 aa22.67■■□□□ 1.22
PAX3-208ENST00000409828 FBXO3Q9UK99 471 aa22.67■■□□□ 1.22
PAX3-208ENST00000409828 LTBP1Q14766 1721 aa22.67■■□□□ 1.22
PAX3-208ENST00000409828 RTFDC1Q9BY42 306 aaPredicted RBP22.66■■□□□ 1.22
PAX3-208ENST00000409828 PODXL2Q9NZ53 605 aa22.66■■□□□ 1.22
PAX3-208ENST00000409828 DICER1Q9UPY3 1922 aaKnown RBP22.66■■□□□ 1.22
PAX3-208ENST00000409828 CCDC88AQ3V6T2 1871 aa22.66■■□□□ 1.22
PAX3-208ENST00000409828 NFKBIEO00221 500 aa22.65■■□□□ 1.22
PAX3-208ENST00000409828 RFX5P48382 616 aaPredicted RBP22.65■■□□□ 1.22
PAX3-208ENST00000409828 FKBP4Q02790 459 aaKnown RBP eCLIP22.65■■□□□ 1.22
PAX3-208ENST00000409828 VPS33BQ9H267 617 aa22.65■■□□□ 1.22
PAX3-208ENST00000409828 TAOK3Q9H2K8 898 aa22.65■■□□□ 1.22
PAX3-208ENST00000409828 SUPT16HQ9Y5B9 1047 aaKnown RBP22.65■■□□□ 1.22
PAX3-208ENST00000409828 AAMPQ13685 434 aa22.64■■□□□ 1.21
PAX3-208ENST00000409828 TAF7LQ5H9L4 462 aa22.64■■□□□ 1.21
PAX3-208ENST00000409828 MPNDQ8N594 471 aa22.64■■□□□ 1.21
PAX3-208ENST00000409828 ZNF219Q9P2Y4 722 aaPredicted RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms