RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 GGT6Q6P531 493 aa3.78□□□□□ -1.8
CUL3-204ENST00000409777 NPHP4O75161 1426 aaPredicted RBP3.77□□□□□ -1.81
CUL3-204ENST00000409777 ANKARQ7Z5J8 1434 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 UNCXA6NJT0 531 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 RAB11FIP3O75154 756 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 GIGYF1O75420 1035 aaPredicted RBP3.77□□□□□ -1.81
CUL3-204ENST00000409777 GNAI2P04899 355 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 EMP3P54852 163 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 FAM193AP78312 1265 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 FBXO31Q5XUX0 539 aaPredicted RBP3.77□□□□□ -1.81
CUL3-204ENST00000409777 RUFY3Q7L099 469 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 PROCA1Q8NCQ7 364 aaPredicted RBP3.77□□□□□ -1.81
CUL3-204ENST00000409777 LRRCC1Q9C099 1032 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 SNX14Q9Y5W7 946 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 SPEF2Q9C093 1822 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 TMEM94Q12767 1356 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 ROBO2Q9HCK4 1378 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 HEG1Q9ULI3 1381 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 C5P01031 1676 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 TBC1D12O60347 775 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 EVI5O60447 810 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 ADCY5O95622 1261 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 F13A1P00488 732 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 MCCP23508 829 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 ATP2B3Q16720 1220 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 G2E3Q7L622 706 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.77□□□□□ -1.81
CUL3-204ENST00000409777 PLA2G4DQ86XP0 818 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 UNC5CLQ8IV45 518 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 ZNF687Q8N1G0 1237 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 NUDT16Q96DE0 195 aaKnown RBP3.77□□□□□ -1.81
CUL3-204ENST00000409777 FEZ1Q99689 392 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 EPAS1Q99814 870 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 BCL2L12Q9HB09 334 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 HYPKQ9NX55 129 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 FAM13BQ9NYF5 915 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 MTMR6Q9Y217 621 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 PARP4Q9UKK3 1724 aaKnown RBP3.77□□□□□ -1.81
CUL3-204ENST00000409777 SLIT3O75094 1523 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 ADCY9O60503 1353 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 FLT4P35916 1363 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 PLEKHG1Q9ULL1 1385 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 RGPD2P0DJD1 1756 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 GNAI3P08754 354 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 FBLN1P23142 703 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 PBX2P40425 430 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 PTGDRQ13258 359 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 VPS53Q5VIR6 699 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 COG3Q96JB2 828 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 HS3ST6Q96QI5 342 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 TTC41PQ6P2S7 1318 aa3.77□□□□□ -1.81
CUL3-204ENST00000409777 RFX7Q2KHR2 1363 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 ADAMTSL3P82987 1691 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 LAMB4A4D0S4 1761 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 ECM29Q5VYK3 1845 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 PNMA6EA0A0J9YXQ4 647 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 NUTM2FA1L443 756 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 SYT1P21579 422 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 TSGA10IPQ3SY00 556 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 SARM1Q6SZW1 724 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 WAPLQ7Z5K2 1190 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 TDRD7Q8NHU6 1098 aaKnown RBP3.76□□□□□ -1.81
CUL3-204ENST00000409777 STK26Q9P289 416 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 KIF3AQ9Y496 699 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 ERBB3P21860 1342 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 MAP3K19Q56UN5 1328 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 MED23Q9ULK4 1368 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 SCN11AQ9UI33 1791 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 STX6O43752 255 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 RAPGEF3O95398 923 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 HOXB7P09629 217 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 RBM6P78332 1123 aaKnown RBP3.76□□□□□ -1.81
CUL3-204ENST00000409777 DCTN1Q14203 1278 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 SLFNL1Q499Z3 407 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 NUTM2DQ5VT03 806 aaPredicted RBP3.76□□□□□ -1.81
CUL3-204ENST00000409777 FAM177A1Q8N128 213 aaPredicted RBP3.76□□□□□ -1.81
CUL3-204ENST00000409777 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.76□□□□□ -1.81
CUL3-204ENST00000409777 PCMTD1Q96MG8 357 aaPredicted RBP3.76□□□□□ -1.81
CUL3-204ENST00000409777 KRTAP3-3Q9BYR6 98 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 KRTAP3-2Q9BYR7 98 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 USP44Q9H0E7 712 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 SH2B1Q9NRF2 756 aaPredicted RBP3.76□□□□□ -1.81
CUL3-204ENST00000409777 CTNNA3Q9UI47 895 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 PYCARDQ9ULZ3 195 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 LIMCH1Q9UPQ0 1083 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 CNPY2Q9Y2B0 182 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 MORC2Q9Y6X9 1032 aaPredicted RBP3.76□□□□□ -1.81
CUL3-204ENST00000409777 C4AP0C0L4 1744 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 C4BP0C0L5 1744 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 NUP188Q5SRE5 1749 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 UTYO14607 1347 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 COL15A1P39059 1388 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 MST1RQ04912 1400 aa3.76□□□□□ -1.81
CUL3-204ENST00000409777 PSDA5PKW4 1024 aaPredicted RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 GABPB1Q06547 395 aaPredicted RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 NCBP1Q09161 790 aaKnown RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 SAFB2Q14151 953 aaKnown RBP eCLIP3.75□□□□□ -1.81
CUL3-204ENST00000409777 NECTIN1Q15223 517 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 ZSCAN31Q96LW9 406 aaPredicted RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 DIAPH3Q9NSV4 1193 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms