RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 CAMK4Q16566 473 aa18.27■□□□□ 0.52
LIMS2-205ENST00000409455 VPS53Q5VIR6 699 aa18.27■□□□□ 0.52
LIMS2-205ENST00000409455 CHMP4AQ9BY43 222 aa18.27■□□□□ 0.52
LIMS2-205ENST00000409455 TNMDQ9H2S6 317 aa18.27■□□□□ 0.52
LIMS2-205ENST00000409455 CHMP3Q9Y3E7 222 aa18.27■□□□□ 0.52
LIMS2-205ENST00000409455 TOM1O60784 492 aa18.27■□□□□ 0.52
LIMS2-205ENST00000409455 RAB11FIP3O75154 756 aa18.27■□□□□ 0.52
LIMS2-205ENST00000409455 PI4K2BQ8TCG2 481 aa18.27■□□□□ 0.52
LIMS2-205ENST00000409455 PDRG1Q9NUG6 133 aa18.27■□□□□ 0.52
LIMS2-205ENST00000409455 ELP1O95163 1332 aa18.26■□□□□ 0.51
LIMS2-205ENST00000409455 PDIA4P13667 645 aaKnown RBP18.26■□□□□ 0.51
LIMS2-205ENST00000409455 TPD52L1Q16890 204 aaPredicted RBP18.26■□□□□ 0.51
LIMS2-205ENST00000409455 ANO6Q4KMQ2 910 aa18.26■□□□□ 0.51
LIMS2-205ENST00000409455 DDX54Q8TDD1 881 aaKnown RBP18.26■□□□□ 0.51
LIMS2-205ENST00000409455 CBX8Q9HC52 389 aa18.26■□□□□ 0.51
LIMS2-205ENST00000409455 PCDH11XQ9BZA7 1347 aa18.26■□□□□ 0.51
LIMS2-205ENST00000409455 PCDH11YQ9BZA8 1340 aa18.26■□□□□ 0.51
LIMS2-205ENST00000409455 UBTFL1P0CB47 393 aaPredicted RBP18.26■□□□□ 0.51
LIMS2-205ENST00000409455 CPA1P15085 419 aa18.26■□□□□ 0.51
LIMS2-205ENST00000409455 CABP4P57796 275 aa18.26■□□□□ 0.51
LIMS2-205ENST00000409455 CWC27Q6UX04 472 aaKnown RBP18.26■□□□□ 0.51
LIMS2-205ENST00000409455 GOLGA6L4A6NEF3 574 aa18.25■□□□□ 0.51
LIMS2-205ENST00000409455 ZNF75DP51815 510 aa18.25■□□□□ 0.51
LIMS2-205ENST00000409455 TTC6Q86TZ1 520 aa18.25■□□□□ 0.51
LIMS2-205ENST00000409455 PLA2G4DQ86XP0 818 aa18.25■□□□□ 0.51
LIMS2-205ENST00000409455 MORC2Q9Y6X9 1032 aaPredicted RBP18.25■□□□□ 0.51
LIMS2-205ENST00000409455 PKD1L3Q7Z443 1732 aa18.25■□□□□ 0.51
LIMS2-205ENST00000409455 JAKMIP1Q96N16 626 aaKnown RBP18.25■□□□□ 0.51
LIMS2-205ENST00000409455 DBF4Q9UBU7 674 aaPredicted RBP18.25■□□□□ 0.51
LIMS2-205ENST00000409455 NRBP1Q9UHY1 535 aa18.25■□□□□ 0.51
LIMS2-205ENST00000409455 CYP46A1Q9Y6A2 500 aa18.25■□□□□ 0.51
LIMS2-205ENST00000409455 SIPA1L3O60292 1781 aaPredicted RBP18.24■□□□□ 0.51
LIMS2-205ENST00000409455 SCN11AQ9UI33 1791 aa18.24■□□□□ 0.51
LIMS2-205ENST00000409455 LIG1P18858 919 aa18.24■□□□□ 0.51
LIMS2-205ENST00000409455 CKAP2LQ8IYA6 745 aa18.24■□□□□ 0.51
LIMS2-205ENST00000409455 KIF18AQ8NI77 898 aa18.24■□□□□ 0.51
LIMS2-205ENST00000409455 SSH3Q8TE77 659 aa18.24■□□□□ 0.51
LIMS2-205ENST00000409455 CCDC171Q6TFL3 1326 aa18.24■□□□□ 0.51
LIMS2-205ENST00000409455 SURF6O75683 361 aaKnown RBP18.24■□□□□ 0.51
LIMS2-205ENST00000409455 BBXQ8WY36 941 aaPredicted RBP18.24■□□□□ 0.51
LIMS2-205ENST00000409455 ZNF496Q96IT1 587 aaPredicted RBP18.24■□□□□ 0.51
LIMS2-205ENST00000409455 CLIP2Q9UDT6 1046 aa18.24■□□□□ 0.51
LIMS2-205ENST00000409455 ADAMTS2O95450 1211 aa18.23■□□□□ 0.51
LIMS2-205ENST00000409455 PROSER3Q2NL68 480 aa18.23■□□□□ 0.51
LIMS2-205ENST00000409455 LARP1BQ659C4 914 aaKnown RBP18.23■□□□□ 0.51
LIMS2-205ENST00000409455 CEP135Q66GS9 1140 aa18.23■□□□□ 0.51
LIMS2-205ENST00000409455 KRT222Q8N1A0 295 aa18.23■□□□□ 0.51
LIMS2-205ENST00000409455 DDX19AQ9NUU7 478 aaKnown RBP18.23■□□□□ 0.51
LIMS2-205ENST00000409455 DACT1Q9NYF0 836 aa18.23■□□□□ 0.51
LIMS2-205ENST00000409455 RHPN1Q8TCX5 695 aa18.23■□□□□ 0.51
LIMS2-205ENST00000409455 RUFY2Q8WXA3 655 aa18.23■□□□□ 0.51
LIMS2-205ENST00000409455 SLFN14P0C7P3 912 aa18.22■□□□□ 0.51
LIMS2-205ENST00000409455 TDRD7Q8NHU6 1098 aaKnown RBP18.22■□□□□ 0.51
LIMS2-205ENST00000409455 ZNF592Q92610 1267 aa18.22■□□□□ 0.51
LIMS2-205ENST00000409455 SCAND2PQ9GZW5 306 aaPredicted RBP18.22■□□□□ 0.51
LIMS2-205ENST00000409455 CACNA1FO60840 1977 aa18.22■□□□□ 0.51
LIMS2-205ENST00000409455 CCDC66A2RUB6 948 aa18.22■□□□□ 0.51
LIMS2-205ENST00000409455 PI4KAP2A4QPH2 592 aa18.22■□□□□ 0.51
LIMS2-205ENST00000409455 PDCP20941 246 aa18.22■□□□□ 0.51
LIMS2-205ENST00000409455 NAA30Q147X3 362 aaPredicted RBP18.22■□□□□ 0.51
LIMS2-205ENST00000409455 NKX1-1Q15270 411 aaPredicted RBP18.22■□□□□ 0.51
LIMS2-205ENST00000409455 TTC5Q8N0Z6 440 aa18.22■□□□□ 0.51
LIMS2-205ENST00000409455 PI4KAP1Q8N8J0 262 aa18.22■□□□□ 0.51
LIMS2-205ENST00000409455 KIF1BPQ96EK5 621 aa18.22■□□□□ 0.51
LIMS2-205ENST00000409455 TM6SF1Q9BZW5 370 aa18.22■□□□□ 0.51
LIMS2-205ENST00000409455 USP44Q9H0E7 712 aa18.22■□□□□ 0.51
LIMS2-205ENST00000409455 ZSWIM6Q9HCJ5 1215 aa18.22■□□□□ 0.51
LIMS2-205ENST00000409455 ZNF397Q8NF99 534 aaPredicted RBP18.21■□□□□ 0.51
LIMS2-205ENST00000409455 PXDNLA1KZ92 1463 aa18.21■□□□□ 0.51
LIMS2-205ENST00000409455 DTNBO60941 627 aa18.21■□□□□ 0.51
LIMS2-205ENST00000409455 ME3Q16798 604 aa18.21■□□□□ 0.51
LIMS2-205ENST00000409455 PRPF40BQ6NWY9 871 aaKnown RBP18.21■□□□□ 0.51
LIMS2-205ENST00000409455 FERMT3Q86UX7 667 aa18.21■□□□□ 0.51
LIMS2-205ENST00000409455 ZNF165P49910 485 aa18.2■□□□□ 0.5
LIMS2-205ENST00000409455 CDC37L1Q7L3B6 337 aa18.2■□□□□ 0.5
LIMS2-205ENST00000409455 PPP1R42Q7Z4L9 355 aa18.2■□□□□ 0.5
LIMS2-205ENST00000409455 CACTINQ8WUQ7 758 aaKnown RBP18.2■□□□□ 0.5
LIMS2-205ENST00000409455 PARP4Q9UKK3 1724 aaKnown RBP18.2■□□□□ 0.5
LIMS2-205ENST00000409455 UBAP1LF5GYI3 381 aa18.2■□□□□ 0.5
LIMS2-205ENST00000409455 ZKSCAN1P17029 563 aaPredicted RBP18.2■□□□□ 0.5
LIMS2-205ENST00000409455 TERF2Q15554 542 aa18.2■□□□□ 0.5
LIMS2-205ENST00000409455 ADCK5Q3MIX3 580 aa18.2■□□□□ 0.5
LIMS2-205ENST00000409455 SPATA32Q96LK8 384 aa18.2■□□□□ 0.5
LIMS2-205ENST00000409455 CLSTN2Q9H4D0 955 aa18.2■□□□□ 0.5
LIMS2-205ENST00000409455 MRC1P22897 1456 aa18.2■□□□□ 0.5
LIMS2-205ENST00000409455 NUTM2BA6NNL0 878 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-205ENST00000409455 NUTM2EB1AL46 878 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-205ENST00000409455 ERVV-2B6SEH9 535 aa18.19■□□□□ 0.5
LIMS2-205ENST00000409455 CDC25BP30305 580 aa18.19■□□□□ 0.5
LIMS2-205ENST00000409455 ST3GAL1Q11201 340 aa18.19■□□□□ 0.5
LIMS2-205ENST00000409455 PDIA6Q15084 440 aa18.19■□□□□ 0.5
LIMS2-205ENST00000409455 RBM43Q6ZSC3 357 aaKnown RBP18.19■□□□□ 0.5
LIMS2-205ENST00000409455 NUTM2AQ8IVF1 878 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-205ENST00000409455 NECAB1Q8N987 351 aa18.19■□□□□ 0.5
LIMS2-205ENST00000409455 USP16Q9Y5T5 823 aa18.19■□□□□ 0.5
LIMS2-205ENST00000409455 COL22A1Q8NFW1 1626 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-205ENST00000409455 CAVIN2O95810 425 aa18.19■□□□□ 0.5
LIMS2-205ENST00000409455 GTF2E1P29083 439 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-205ENST00000409455 DNAAF4Q8WXU2 420 aa18.19■□□□□ 0.5
LIMS2-205ENST00000409455 NEMFO60524 1076 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms