RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 LRFN2Q9ULH4 789 aa7.57□□□□□ -1.2
CLK1-202ENST00000409403 IGF1RP08069 1367 aa7.56□□□□□ -1.2
CLK1-202ENST00000409403 AVPP01185 164 aa7.56□□□□□ -1.2
CLK1-202ENST00000409403 MAPK1P28482 360 aa7.56□□□□□ -1.2
CLK1-202ENST00000409403 PLA2G4AP47712 749 aa7.56□□□□□ -1.2
CLK1-202ENST00000409403 ZNF772Q68DY9 489 aaPredicted RBP7.56□□□□□ -1.2
CLK1-202ENST00000409403 PHACTR1Q9C0D0 580 aa7.56□□□□□ -1.2
CLK1-202ENST00000409403 SPATA31C2B4DYI2 1134 aa7.55□□□□□ -1.2
CLK1-202ENST00000409403 BRD2P25440 801 aaKnown RBP7.55□□□□□ -1.2
CLK1-202ENST00000409403 C4orf17Q53FE4 359 aa7.55□□□□□ -1.2
CLK1-202ENST00000409403 C6orf118Q5T5N4 469 aa7.55□□□□□ -1.2
CLK1-202ENST00000409403 C1orf53Q5VUE5 145 aa7.55□□□□□ -1.2
CLK1-202ENST00000409403 ALKBH2Q6NS38 261 aa7.55□□□□□ -1.2
CLK1-202ENST00000409403 ITSN2Q9NZM3 1697 aa7.55□□□□□ -1.2
CLK1-202ENST00000409403 FANCIQ9NVI1 1328 aa7.54□□□□□ -1.2
CLK1-202ENST00000409403 NBPF1Q3BBV0 1214 aa7.54□□□□□ -1.2
CLK1-202ENST00000409403 ABTB2Q8N961 1025 aa7.54□□□□□ -1.2
CLK1-202ENST00000409403 RNF217Q8TC41 542 aa7.54□□□□□ -1.2
CLK1-202ENST00000409403 COL16A1Q07092 1604 aaPredicted RBP7.54□□□□□ -1.2
CLK1-202ENST00000409403 FAM135BQ49AJ0 1406 aa7.54□□□□□ -1.2
CLK1-202ENST00000409403 TXLNAP40222 546 aa7.54□□□□□ -1.2
CLK1-202ENST00000409403 EIF1AXP47813 144 aaKnown RBP7.54□□□□□ -1.2
CLK1-202ENST00000409403 DGKZQ13574 1117 aa7.54□□□□□ -1.2
CLK1-202ENST00000409403 SCARF1Q14162 830 aa7.54□□□□□ -1.2
CLK1-202ENST00000409403 C11orf91Q3C1V1 193 aa7.54□□□□□ -1.2
CLK1-202ENST00000409403 NOM1Q5C9Z4 860 aaKnown RBP7.54□□□□□ -1.2
CLK1-202ENST00000409403 ZSCAN29Q8IWY8 852 aaPredicted RBP7.54□□□□□ -1.2
CLK1-202ENST00000409403 EP400Q96L91 3159 aa7.53□□□□□ -1.2
CLK1-202ENST00000409403 ADGBQ8N7X0 1667 aa7.53□□□□□ -1.2
CLK1-202ENST00000409403 CTTNBP2Q8WZ74 1663 aa7.53□□□□□ -1.2
CLK1-202ENST00000409403 ANKRD33BA6NCL7 494 aa7.53□□□□□ -1.2
CLK1-202ENST00000409403 RBM25P49756 843 aaKnown RBP7.53□□□□□ -1.2
CLK1-202ENST00000409403 AAMPQ13685 434 aa7.53□□□□□ -1.2
CLK1-202ENST00000409403 CTC1Q2NKJ3 1217 aa7.53□□□□□ -1.2
CLK1-202ENST00000409403 MEX3CQ5U5Q3 659 aaKnown RBP7.53□□□□□ -1.2
CLK1-202ENST00000409403 LYSMD3Q7Z3D4 306 aa7.53□□□□□ -1.2
CLK1-202ENST00000409403 AIDAQ96BJ3 306 aa7.53□□□□□ -1.2
CLK1-202ENST00000409403 ASB16Q96NS5 453 aa7.53□□□□□ -1.2
CLK1-202ENST00000409403 ZDHHC3Q9NYG2 299 aa7.53□□□□□ -1.2
CLK1-202ENST00000409403 SCAPERQ9BY12 1400 aa7.53□□□□□ -1.2
CLK1-202ENST00000409403 CNTLNQ9NXG0 1405 aa7.53□□□□□ -1.2
CLK1-202ENST00000409403 SHPRHQ149N8 1683 aa7.52□□□□□ -1.21
CLK1-202ENST00000409403 NDUFB5O43674 189 aa7.52□□□□□ -1.21
CLK1-202ENST00000409403 NEFLP07196 543 aa7.52□□□□□ -1.21
CLK1-202ENST00000409403 PHKA2P46019 1235 aa7.52□□□□□ -1.21
CLK1-202ENST00000409403 SMCPP49901 116 aaPredicted RBP7.52□□□□□ -1.21
CLK1-202ENST00000409403 PKDCCQ504Y2 493 aa7.52□□□□□ -1.21
CLK1-202ENST00000409403 WDR44Q5JSH3 913 aa7.52□□□□□ -1.21
CLK1-202ENST00000409403 NBPF10Q6P3W6 841 aaKnown RBP7.52□□□□□ -1.21
CLK1-202ENST00000409403 PRICKLE2Q7Z3G6 844 aa7.52□□□□□ -1.21
CLK1-202ENST00000409403 JCADQ9P266 1359 aa7.52□□□□□ -1.21
CLK1-202ENST00000409403 A2ML1A8K2U0 1454 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 TTLL8A6PVC2 850 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 DGAT1O75907 488 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 BMP1P13497 986 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 POU4F2Q12837 409 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 RHPN1Q8TCX5 695 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 ZNF428Q96B54 188 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 IFT43Q96FT9 208 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 KLK14Q9P0G3 267 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 BRPF3Q9ULD4 1205 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 DEPDC5O75140 1603 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 ZBTB39O15060 712 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 TATP17735 454 aaPredicted RBP7.51□□□□□ -1.21
CLK1-202ENST00000409403 HIF1AQ16665 826 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 FAM26DQ5JW98 314 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 NPAS4Q8IUM7 802 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 ETFBKMTQ8IXQ9 262 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 RGL4Q8IZJ4 473 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 CITED4Q96RK1 184 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 RBCK1Q9BYM8 510 aa7.51□□□□□ -1.21
CLK1-202ENST00000409403 ZC3H13Q5T200 1668 aaKnown RBP7.5□□□□□ -1.21
CLK1-202ENST00000409403 CEP350Q5VT06 3117 aa7.5□□□□□ -1.21
CLK1-202ENST00000409403 RBM47A0AV96 593 aaKnown RBP7.5□□□□□ -1.21
CLK1-202ENST00000409403 FZD6O60353 706 aa7.5□□□□□ -1.21
CLK1-202ENST00000409403 UBE2Q2Q8WVN8 375 aa7.5□□□□□ -1.21
CLK1-202ENST00000409403 GPC6Q9Y625 555 aaPredicted RBP7.5□□□□□ -1.21
CLK1-202ENST00000409403 CARMIL1Q5VZK9 1371 aa7.5□□□□□ -1.21
CLK1-202ENST00000409403 CAMTA1Q9Y6Y1 1673 aa7.49□□□□□ -1.21
CLK1-202ENST00000409403 NPHP4O75161 1426 aaPredicted RBP7.49□□□□□ -1.21
CLK1-202ENST00000409403 AXIN1O15169 862 aa7.49□□□□□ -1.21
CLK1-202ENST00000409403 C1QTNF8P60827 252 aa7.49□□□□□ -1.21
CLK1-202ENST00000409403 TRIM46Q7Z4K8 759 aa7.49□□□□□ -1.21
CLK1-202ENST00000409403 CRIPAKQ8N1N5 446 aa7.49□□□□□ -1.21
CLK1-202ENST00000409403 C7orf43Q8WVR3 580 aa7.49□□□□□ -1.21
CLK1-202ENST00000409403 CCDC87Q9NVE4 849 aa7.49□□□□□ -1.21
CLK1-202ENST00000409403 SOS2Q07890 1332 aaPredicted RBP7.49□□□□□ -1.21
CLK1-202ENST00000409403 ZAP70P43403 619 aa7.48□□□□□ -1.21
CLK1-202ENST00000409403 ATCAYQ86WG3 371 aa7.48□□□□□ -1.21
CLK1-202ENST00000409403 BCL2L13Q9BXK5 485 aa7.48□□□□□ -1.21
CLK1-202ENST00000409403 BCL9LQ86UU0 1499 aa7.48□□□□□ -1.21
CLK1-202ENST00000409403 A0A1B0GTH6 734 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 FIGNL2A6NMB9 653 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 RHOQP17081 205 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 ATP4AP20648 1035 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 ZNF787Q6DD87 383 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 BICDL1Q6ZP65 573 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 TMC7Q7Z402 723 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 TREML1Q86YW5 311 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 ZFP42Q96MM3 310 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms