RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SPATA31E1Q6ZUB1 1445 aa20.24■□□□□ 0.83
SMPD4-202ENST00000409031 G3V3G9 751 aa20.24■□□□□ 0.83
SMPD4-202ENST00000409031 IFIT1P09914 478 aaKnown RBP20.24■□□□□ 0.83
SMPD4-202ENST00000409031 IARSP41252 1262 aaKnown RBP20.24■□□□□ 0.83
SMPD4-202ENST00000409031 MATR3P43243 847 aaKnown RBP eCLIP20.24■□□□□ 0.83
SMPD4-202ENST00000409031 KARSQ15046 597 aaKnown RBP20.24■□□□□ 0.83
SMPD4-202ENST00000409031 DCAF8Q5TAQ9 597 aa20.24■□□□□ 0.83
SMPD4-202ENST00000409031 BAG1Q99933 345 aaPredicted RBP20.24■□□□□ 0.83
SMPD4-202ENST00000409031 ELP1O95163 1332 aa20.24■□□□□ 0.83
SMPD4-202ENST00000409031 DNMBPQ6XZF7 1577 aa20.24■□□□□ 0.83
SMPD4-202ENST00000409031 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
SMPD4-202ENST00000409031 CCDC178Q5BJE1 867 aa20.23■□□□□ 0.83
SMPD4-202ENST00000409031 ZNF569Q5MCW4 686 aa20.23■□□□□ 0.83
SMPD4-202ENST00000409031 MTMR7Q9Y216 660 aa20.23■□□□□ 0.83
SMPD4-202ENST00000409031 TEX14Q8IWB6 1497 aa20.23■□□□□ 0.83
SMPD4-202ENST00000409031 SSRP1Q08945 709 aaKnown RBP20.23■□□□□ 0.83
SMPD4-202ENST00000409031 RUFY3Q7L099 469 aa20.23■□□□□ 0.83
SMPD4-202ENST00000409031 FAM83GA6ND36 823 aa20.23■□□□□ 0.83
SMPD4-202ENST00000409031 ERBB4Q15303 1308 aa20.23■□□□□ 0.83
SMPD4-202ENST00000409031 VPS36Q86VN1 386 aa20.22■□□□□ 0.83
SMPD4-202ENST00000409031 PIK3R4Q99570 1358 aa20.22■□□□□ 0.83
SMPD4-202ENST00000409031 MYL6BP14649 208 aa20.22■□□□□ 0.83
SMPD4-202ENST00000409031 MYL5Q02045 173 aa20.22■□□□□ 0.83
SMPD4-202ENST00000409031 TDRD12Q587J7 1177 aaKnown RBP20.22■□□□□ 0.83
SMPD4-202ENST00000409031 ANKRD24Q8TF21 1146 aa20.22■□□□□ 0.83
SMPD4-202ENST00000409031 LZTFL1Q9NQ48 299 aa20.22■□□□□ 0.83
SMPD4-202ENST00000409031 TTC41PQ6P2S7 1318 aa20.22■□□□□ 0.83
SMPD4-202ENST00000409031 CCDC114Q96M63 670 aa20.22■□□□□ 0.83
SMPD4-202ENST00000409031 NUDT16Q96DE0 195 aaKnown RBP20.22■□□□□ 0.83
SMPD4-202ENST00000409031 DMRT2Q9Y5R5 561 aa20.22■□□□□ 0.83
SMPD4-202ENST00000409031 GOLIM4O00461 696 aa20.21■□□□□ 0.83
SMPD4-202ENST00000409031 CHMP4BP1P59074 171 aa20.21■□□□□ 0.83
SMPD4-202ENST00000409031 GOLGA8AA7E2F4 631 aa20.21■□□□□ 0.83
SMPD4-202ENST00000409031 AIDAQ96BJ3 306 aa20.21■□□□□ 0.83
SMPD4-202ENST00000409031 C14orf93Q9H972 538 aaKnown RBP20.21■□□□□ 0.83
SMPD4-202ENST00000409031 SLC12A7Q9Y666 1083 aa20.21■□□□□ 0.83
SMPD4-202ENST00000409031 KRT86O43790 486 aa20.21■□□□□ 0.83
SMPD4-202ENST00000409031 INPP5BP32019 993 aa20.21■□□□□ 0.83
SMPD4-202ENST00000409031 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
SMPD4-202ENST00000409031 MTIF2P46199 727 aaKnown RBP20.21■□□□□ 0.83
SMPD4-202ENST00000409031 KRT83P78385 493 aa20.21■□□□□ 0.83
SMPD4-202ENST00000409031 DNA2P51530 1060 aa20.2■□□□□ 0.82
SMPD4-202ENST00000409031 SOGA3Q5TF21 947 aa20.2■□□□□ 0.82
SMPD4-202ENST00000409031 MSL1Q68DK7 614 aa20.2■□□□□ 0.82
SMPD4-202ENST00000409031 NME9Q86XW9 330 aa20.2■□□□□ 0.82
SMPD4-202ENST00000409031 MYCBPQ99417 103 aaPredicted RBP20.2■□□□□ 0.82
SMPD4-202ENST00000409031 AKAP2Q9Y2D5 859 aa20.2■□□□□ 0.82
SMPD4-202ENST00000409031 SNAPC4Q5SXM2 1469 aa20.2■□□□□ 0.82
SMPD4-202ENST00000409031 Q6ZUG5 572 aa20.2■□□□□ 0.82
SMPD4-202ENST00000409031 WDHD1O75717 1129 aaPredicted RBP20.2■□□□□ 0.82
SMPD4-202ENST00000409031 GPR161Q8N6U8 529 aaKnown RBP20.2■□□□□ 0.82
SMPD4-202ENST00000409031 AKR1B10O60218 316 aa20.2■□□□□ 0.82
SMPD4-202ENST00000409031 HSP90AA4PQ58FG1 418 aa20.2■□□□□ 0.82
SMPD4-202ENST00000409031 CREB3L3Q68CJ9 461 aa20.2■□□□□ 0.82
SMPD4-202ENST00000409031 FAM114A1Q8IWE2 563 aa20.2■□□□□ 0.82
SMPD4-202ENST00000409031 TSPYL6Q8N831 410 aa20.2■□□□□ 0.82
SMPD4-202ENST00000409031 ATP2C2O75185 946 aa20.19■□□□□ 0.82
SMPD4-202ENST00000409031 TACC1O75410 805 aa20.19■□□□□ 0.82
SMPD4-202ENST00000409031 IDH1O75874 414 aaKnown RBP20.19■□□□□ 0.82
SMPD4-202ENST00000409031 ERCC6LQ2NKX8 1250 aa20.19■□□□□ 0.82
SMPD4-202ENST00000409031 RSRC1Q96IZ7 334 aaKnown RBP20.19■□□□□ 0.82
SMPD4-202ENST00000409031 KIAA1524Q8TCG1 905 aa20.19■□□□□ 0.82
SMPD4-202ENST00000409031 ZHX3Q9H4I2 956 aa20.19■□□□□ 0.82
SMPD4-202ENST00000409031 ARHGAP6O43182 974 aa20.19■□□□□ 0.82
SMPD4-202ENST00000409031 CARD14Q9BXL6 1004 aa20.19■□□□□ 0.82
SMPD4-202ENST00000409031 ZEB2O60315 1214 aa20.18■□□□□ 0.82
SMPD4-202ENST00000409031 MAP2K2P36507 400 aa20.18■□□□□ 0.82
SMPD4-202ENST00000409031 GNL3LQ9NVN8 582 aaKnown RBP20.18■□□□□ 0.82
SMPD4-202ENST00000409031 TRIM21P19474 475 aaKnown RBP20.18■□□□□ 0.82
SMPD4-202ENST00000409031 ANKS4BQ8N8V4 417 aa20.18■□□□□ 0.82
SMPD4-202ENST00000409031 GOPCQ9HD26 462 aa20.18■□□□□ 0.82
SMPD4-202ENST00000409031 ANKRD62A6NC57 917 aa20.18■□□□□ 0.82
SMPD4-202ENST00000409031 TRMT2AQ8IZ69 625 aaKnown RBP20.18■□□□□ 0.82
SMPD4-202ENST00000409031 PUS7Q96PZ0 661 aaKnown RBP20.18■□□□□ 0.82
SMPD4-202ENST00000409031 TSG101Q99816 390 aa20.18■□□□□ 0.82
SMPD4-202ENST00000409031 VAV2P52735 878 aa20.17■□□□□ 0.82
SMPD4-202ENST00000409031 PKP1Q13835 747 aa20.17■□□□□ 0.82
SMPD4-202ENST00000409031 NCOA7Q8NI08 942 aa20.17■□□□□ 0.82
SMPD4-202ENST00000409031 OTUD7AQ8TE49 926 aaPredicted RBP20.17■□□□□ 0.82
SMPD4-202ENST00000409031 TAOK3Q9H2K8 898 aa20.17■□□□□ 0.82
SMPD4-202ENST00000409031 CNGA4Q8IV77 575 aa20.17■□□□□ 0.82
SMPD4-202ENST00000409031 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
SMPD4-202ENST00000409031 BRD3Q15059 726 aa20.17■□□□□ 0.82
SMPD4-202ENST00000409031 KLHL34Q8N239 644 aa20.17■□□□□ 0.82
SMPD4-202ENST00000409031 GOLGA5Q8TBA6 731 aa20.17■□□□□ 0.82
SMPD4-202ENST00000409031 LEO1Q8WVC0 666 aaPredicted RBP20.17■□□□□ 0.82
SMPD4-202ENST00000409031 NSRP1Q9H0G5 558 aaKnown RBP20.17■□□□□ 0.82
SMPD4-202ENST00000409031 RMND1Q9NWS8 449 aa20.17■□□□□ 0.82
SMPD4-202ENST00000409031 METAP2P50579 478 aaKnown RBP eCLIP20.16■□□□□ 0.82
SMPD4-202ENST00000409031 NUTM2AQ8IVF1 878 aaPredicted RBP20.16■□□□□ 0.82
SMPD4-202ENST00000409031 PYCARDQ9ULZ3 195 aa20.16■□□□□ 0.82
SMPD4-202ENST00000409031 RAD50Q92878 1312 aa20.16■□□□□ 0.82
SMPD4-202ENST00000409031 NDUFAB1O14561 156 aa20.16■□□□□ 0.82
SMPD4-202ENST00000409031 PPFIA3O75145 1194 aa20.16■□□□□ 0.82
SMPD4-202ENST00000409031 KIF6Q6ZMV9 814 aa20.16■□□□□ 0.82
SMPD4-202ENST00000409031 BRAPQ7Z569 592 aa20.16■□□□□ 0.82
SMPD4-202ENST00000409031 CLGNO14967 610 aa20.16■□□□□ 0.82
SMPD4-202ENST00000409031 LRMPQ12912 555 aa20.16■□□□□ 0.82
SMPD4-202ENST00000409031 KLF18A0A0U1RQI7 1052 aa20.16■□□□□ 0.82
SMPD4-202ENST00000409031 KIF5AQ12840 1032 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms