RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 ALDH1L1O75891 902 aa26.4■■□□□ 1.82
PDGFA-204ENST00000405692 FKBP4Q02790 459 aaKnown RBP eCLIP26.4■■□□□ 1.82
PDGFA-204ENST00000405692 UBE3BQ7Z3V4 1068 aa26.4■■□□□ 1.82
PDGFA-204ENST00000405692 JARID2Q92833 1246 aaPredicted RBP26.4■■□□□ 1.82
PDGFA-204ENST00000405692 ATP6V0A2Q9Y487 856 aa26.4■■□□□ 1.82
PDGFA-204ENST00000405692 LAMB2P55268 1798 aa26.4■■□□□ 1.82
PDGFA-204ENST00000405692 BRPF1P55201 1214 aaPredicted RBP26.39■■□□□ 1.82
PDGFA-204ENST00000405692 SRCIN1Q9C0H9 1055 aa26.39■■□□□ 1.82
PDGFA-204ENST00000405692 FER1L6Q2WGJ9 1857 aa26.38■■□□□ 1.81
PDGFA-204ENST00000405692 SP8Q8IXZ3 490 aa26.38■■□□□ 1.81
PDGFA-204ENST00000405692 CTSWP56202 376 aa26.37■■□□□ 1.81
PDGFA-204ENST00000405692 PSMD1Q99460 953 aa26.37■■□□□ 1.81
PDGFA-204ENST00000405692 RARSP54136 660 aaKnown RBP26.36■■□□□ 1.81
PDGFA-204ENST00000405692 OLFM4Q6UX06 510 aa26.36■■□□□ 1.81
PDGFA-204ENST00000405692 PLA2G12BQ9BX93 195 aa26.36■■□□□ 1.81
PDGFA-204ENST00000405692 GPBP1L1Q9HC44 474 aaPredicted RBP26.35■■□□□ 1.81
PDGFA-204ENST00000405692 C9orf78Q9NZ63 289 aaPredicted RBP26.35■■□□□ 1.81
PDGFA-204ENST00000405692 KIF16BQ96L93 1317 aa26.35■■□□□ 1.81
PDGFA-204ENST00000405692 SBF1O95248 1867 aa26.34■■□□□ 1.81
PDGFA-204ENST00000405692 RPS8P62241 208 aaKnown RBP26.34■■□□□ 1.81
PDGFA-204ENST00000405692 GRM8O00222 908 aa26.33■■□□□ 1.81
PDGFA-204ENST00000405692 PRELPP51888 382 aa26.33■■□□□ 1.81
PDGFA-204ENST00000405692 SUPT20HQ8NEM7 779 aa26.33■■□□□ 1.81
PDGFA-204ENST00000405692 TTLL11Q8NHH1 800 aa26.33■■□□□ 1.81
PDGFA-204ENST00000405692 CELF1Q92879 486 aaKnown RBP26.33■■□□□ 1.81
PDGFA-204ENST00000405692 API5Q9BZZ5 524 aaKnown RBP26.33■■□□□ 1.81
PDGFA-204ENST00000405692 CASP7P55210 303 aa26.32■■□□□ 1.8
PDGFA-204ENST00000405692 CDC5LQ99459 802 aaKnown RBP26.32■■□□□ 1.8
PDGFA-204ENST00000405692 NOB1Q9ULX3 412 aaKnown RBP26.32■■□□□ 1.8
PDGFA-204ENST00000405692 KDM2BQ8NHM5 1336 aa26.32■■□□□ 1.8
PDGFA-204ENST00000405692 DPP8Q6V1X1 898 aaPredicted RBP26.31■■□□□ 1.8
PDGFA-204ENST00000405692 MPNDQ8N594 471 aa26.31■■□□□ 1.8
PDGFA-204ENST00000405692 ZNF526Q8TF50 670 aaPredicted RBP26.31■■□□□ 1.8
PDGFA-204ENST00000405692 VPS33BQ9H267 617 aa26.31■■□□□ 1.8
PDGFA-204ENST00000405692 ZNF277Q9NRM2 450 aaPredicted RBP26.31■■□□□ 1.8
PDGFA-204ENST00000405692 RTL9Q8NET4 1388 aa26.31■■□□□ 1.8
PDGFA-204ENST00000405692 SNED1Q8TER0 1413 aa26.31■■□□□ 1.8
PDGFA-204ENST00000405692 IPO8O15397 1037 aaKnown RBP26.3■■□□□ 1.8
PDGFA-204ENST00000405692 IARSP41252 1262 aaKnown RBP26.3■■□□□ 1.8
PDGFA-204ENST00000405692 DPY19L2Q6NUT2 758 aa26.3■■□□□ 1.8
PDGFA-204ENST00000405692 ANKRD18AQ8IVF6 992 aa26.3■■□□□ 1.8
PDGFA-204ENST00000405692 ARHGAP45Q92619 1136 aa26.3■■□□□ 1.8
PDGFA-204ENST00000405692 CCDC85AQ96PX6 553 aaPredicted RBP26.3■■□□□ 1.8
PDGFA-204ENST00000405692 SEC31BQ9NQW1 1179 aa26.3■■□□□ 1.8
PDGFA-204ENST00000405692 CCT4P50991 539 aaKnown RBP26.28■■□□□ 1.8
PDGFA-204ENST00000405692 JDP2Q8WYK2 163 aa26.28■■□□□ 1.8
PDGFA-204ENST00000405692 CSF1RP07333 972 aa26.27■■□□□ 1.8
PDGFA-204ENST00000405692 RTFDC1Q9BY42 306 aaPredicted RBP26.27■■□□□ 1.8
PDGFA-204ENST00000405692 GREM2Q9H772 168 aa26.27■■□□□ 1.8
PDGFA-204ENST00000405692 CCDC88AQ3V6T2 1871 aa26.26■■□□□ 1.79
PDGFA-204ENST00000405692 GLTPD2A6NH11 291 aa26.26■■□□□ 1.79
PDGFA-204ENST00000405692 UTYO14607 1347 aa26.25■■□□□ 1.79
PDGFA-204ENST00000405692 LARGE2Q8N3Y3 721 aa26.25■■□□□ 1.79
PDGFA-204ENST00000405692 NSFL1CQ9UNZ2 370 aaKnown RBP26.25■■□□□ 1.79
PDGFA-204ENST00000405692 MYH3P11055 1940 aa26.25■■□□□ 1.79
PDGFA-204ENST00000405692 DICER1Q9UPY3 1922 aaKnown RBP26.24■■□□□ 1.79
PDGFA-204ENST00000405692 IGHMBP2P38935 993 aaKnown RBP26.24■■□□□ 1.79
PDGFA-204ENST00000405692 TIAM2Q8IVF5 1701 aa26.24■■□□□ 1.79
PDGFA-204ENST00000405692 PPIP5K2O43314 1243 aa26.23■■□□□ 1.79
PDGFA-204ENST00000405692 ITGA6P23229 1130 aa26.23■■□□□ 1.79
PDGFA-204ENST00000405692 FOXO4P98177 505 aa26.23■■□□□ 1.79
PDGFA-204ENST00000405692 BSDC1Q9NW68 430 aaPredicted RBP26.23■■□□□ 1.79
PDGFA-204ENST00000405692 TAF1P21675 1872 aa26.22■■□□□ 1.79
PDGFA-204ENST00000405692 ANKRD18BA2A2Z9 1011 aa26.22■■□□□ 1.79
PDGFA-204ENST00000405692 IFIT5Q13325 482 aaKnown RBP26.22■■□□□ 1.79
PDGFA-204ENST00000405692 FAM161AQ3B820 660 aa26.22■■□□□ 1.79
PDGFA-204ENST00000405692 CHMP3Q9Y3E7 222 aa26.22■■□□□ 1.79
PDGFA-204ENST00000405692 LRRC37AA6NMS7 1700 aa26.22■■□□□ 1.79
PDGFA-204ENST00000405692 BCAR3O75815 825 aa26.21■■□□□ 1.79
PDGFA-204ENST00000405692 NBPF7P0C2Y1 421 aaPredicted RBP26.21■■□□□ 1.79
PDGFA-204ENST00000405692 SLC51AQ86UW1 340 aa26.21■■□□□ 1.79
PDGFA-204ENST00000405692 NIM1KQ8IY84 436 aa26.21■■□□□ 1.79
PDGFA-204ENST00000405692 FRAT1Q92837 279 aaPredicted RBP26.21■■□□□ 1.79
PDGFA-204ENST00000405692 EYA3Q99504 573 aa26.21■■□□□ 1.79
PDGFA-204ENST00000405692 MPHOSPH8Q99549 860 aa26.21■■□□□ 1.79
PDGFA-204ENST00000405692 ANKIB1Q9P2G1 1089 aa26.21■■□□□ 1.79
PDGFA-204ENST00000405692 HDAC5Q9UQL6 1122 aa26.21■■□□□ 1.79
PDGFA-204ENST00000405692 GPSM2P81274 684 aa26.2■■□□□ 1.78
PDGFA-204ENST00000405692 CCDC57Q2TAC2 916 aa26.2■■□□□ 1.78
PDGFA-204ENST00000405692 LMBR1LQ6UX01 489 aa26.2■■□□□ 1.78
PDGFA-204ENST00000405692 PODXL2Q9NZ53 605 aa26.2■■□□□ 1.78
PDGFA-204ENST00000405692 C6orf229H3BNL8 230 aa26.19■■□□□ 1.78
PDGFA-204ENST00000405692 FZD9O00144 591 aa26.19■■□□□ 1.78
PDGFA-204ENST00000405692 EIF6P56537 245 aaKnown RBP26.19■■□□□ 1.78
PDGFA-204ENST00000405692 KIAA2012Q0VF49 1180 aa26.19■■□□□ 1.78
PDGFA-204ENST00000405692 AOC3Q16853 763 aa26.19■■□□□ 1.78
PDGFA-204ENST00000405692 ATF7IPQ6VMQ6 1270 aa26.19■■□□□ 1.78
PDGFA-204ENST00000405692 SUCLG2Q96I99 432 aa26.19■■□□□ 1.78
PDGFA-204ENST00000405692 USP44Q9H0E7 712 aa26.19■■□□□ 1.78
PDGFA-204ENST00000405692 WASHC4Q2M389 1173 aa26.18■■□□□ 1.78
PDGFA-204ENST00000405692 ZKSCAN2Q63HK3 967 aa26.18■■□□□ 1.78
PDGFA-204ENST00000405692 GGA1Q9UJY5 639 aa26.18■■□□□ 1.78
PDGFA-204ENST00000405692 XDHP47989 1333 aa26.17■■□□□ 1.78
PDGFA-204ENST00000405692 EPHA10Q5JZY3 1008 aa26.17■■□□□ 1.78
PDGFA-204ENST00000405692 NMRK2Q9NPI5 230 aa26.17■■□□□ 1.78
PDGFA-204ENST00000405692 COL4A1P02462 1669 aa26.16■■□□□ 1.78
PDGFA-204ENST00000405692 TRIM27P14373 513 aa26.16■■□□□ 1.78
PDGFA-204ENST00000405692 TAF7LQ5H9L4 462 aa26.16■■□□□ 1.78
PDGFA-204ENST00000405692 INTS3Q68E01 1043 aaKnown RBP26.16■■□□□ 1.78
PDGFA-204ENST00000405692 C16orf71Q8IYS4 520 aaPredicted RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms