RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 MPNDQ8N594 471 aa25.29■■□□□ 1.64
HDAC11-205ENST00000404548 AIDAQ96BJ3 306 aa25.29■■□□□ 1.64
HDAC11-205ENST00000404548 ADARB2Q9NS39 739 aaKnown RBP25.29■■□□□ 1.64
HDAC11-205ENST00000404548 WBP1LQ9NX94 342 aa25.29■■□□□ 1.64
HDAC11-205ENST00000404548 CTCFP49711 727 aaPredicted RBP25.28■■□□□ 1.64
HDAC11-205ENST00000404548 CXCL9Q07325 125 aa25.28■■□□□ 1.64
HDAC11-205ENST00000404548 CFAP44Q96MT7 982 aa25.28■■□□□ 1.64
HDAC11-205ENST00000404548 LRRC37AA6NMS7 1700 aa25.28■■□□□ 1.64
HDAC11-205ENST00000404548 ANKRD13DQ6ZTN6 518 aa25.27■■□□□ 1.64
HDAC11-205ENST00000404548 ISCA1Q9BUE6 129 aa25.27■■□□□ 1.64
HDAC11-205ENST00000404548 ADAMTS8Q9UP79 889 aa25.27■■□□□ 1.64
HDAC11-205ENST00000404548 HYPKQ9NX55 129 aa25.26■■□□□ 1.63
HDAC11-205ENST00000404548 THSD7BQ9C0I4 1608 aa25.26■■□□□ 1.63
HDAC11-205ENST00000404548 TRIM28Q13263 835 aaKnown RBP25.25■■□□□ 1.63
HDAC11-205ENST00000404548 ABT1Q9ULW3 272 aaKnown RBP25.25■■□□□ 1.63
HDAC11-205ENST00000404548 LAS1LQ9Y4W2 734 aaKnown RBP25.25■■□□□ 1.63
HDAC11-205ENST00000404548 WDR33Q9C0J8 1336 aaKnown RBP25.25■■□□□ 1.63
HDAC11-205ENST00000404548 DUOX1Q9NRD9 1551 aa25.25■■□□□ 1.63
HDAC11-205ENST00000404548 DDX60Q8IY21 1712 aaKnown RBP25.24■■□□□ 1.63
HDAC11-205ENST00000404548 MAP2K1Q02750 393 aaPredicted RBP25.24■■□□□ 1.63
HDAC11-205ENST00000404548 SF3B3Q15393 1217 aaKnown RBP25.24■■□□□ 1.63
HDAC11-205ENST00000404548 CIAPIN1Q6FI81 312 aa25.24■■□□□ 1.63
HDAC11-205ENST00000404548 CAPN15O75808 1086 aa25.23■■□□□ 1.63
HDAC11-205ENST00000404548 TNIP1Q15025 636 aa25.23■■□□□ 1.63
HDAC11-205ENST00000404548 PGAP2Q9UHJ9 254 aa25.23■■□□□ 1.63
HDAC11-205ENST00000404548 ZNF853P0CG23 659 aa25.22■■□□□ 1.63
HDAC11-205ENST00000404548 GMPSP49915 693 aaPredicted RBP25.22■■□□□ 1.63
HDAC11-205ENST00000404548 ZC3H15Q8WU90 426 aaKnown RBP25.22■■□□□ 1.63
HDAC11-205ENST00000404548 ECE1P42892 770 aa25.21■■□□□ 1.63
HDAC11-205ENST00000404548 DUSP27Q5VZP5 1158 aa25.21■■□□□ 1.63
HDAC11-205ENST00000404548 TRPM7Q96QT4 1865 aa25.21■■□□□ 1.63
HDAC11-205ENST00000404548 CALD1Q05682 793 aaKnown RBP25.2■■□□□ 1.62
HDAC11-205ENST00000404548 CST9Q5W186 159 aa25.2■■□□□ 1.62
HDAC11-205ENST00000404548 PRKRIP1Q9H875 184 aaPredicted RBP25.2■■□□□ 1.62
HDAC11-205ENST00000404548 MBIPQ9NS73 344 aa25.2■■□□□ 1.62
HDAC11-205ENST00000404548 TLL2Q9Y6L7 1015 aa25.2■■□□□ 1.62
HDAC11-205ENST00000404548 FAM89AQ96GI7 184 aa25.19■■□□□ 1.62
HDAC11-205ENST00000404548 IFT57Q9NWB7 429 aa25.19■■□□□ 1.62
HDAC11-205ENST00000404548 TRAF5O00463 557 aa25.18■■□□□ 1.62
HDAC11-205ENST00000404548 YDJCA8MPS7 323 aa25.17■■□□□ 1.62
HDAC11-205ENST00000404548 RAD17O75943 681 aa25.17■■□□□ 1.62
HDAC11-205ENST00000404548 FMR1Q06787 632 aaKnown RBP eCLIP25.17■■□□□ 1.62
HDAC11-205ENST00000404548 HHIPL1Q96JK4 782 aa25.17■■□□□ 1.62
HDAC11-205ENST00000404548 CAPNS2Q96L46 248 aa25.17■■□□□ 1.62
HDAC11-205ENST00000404548 BCL2L13Q9BXK5 485 aa25.17■■□□□ 1.62
HDAC11-205ENST00000404548 ATP5J2-PTCD1G3V325 749 aa25.16■■□□□ 1.62
HDAC11-205ENST00000404548 HSP90B1P14625 803 aaKnown RBP25.16■■□□□ 1.62
HDAC11-205ENST00000404548 DPF2Q92785 391 aa25.16■■□□□ 1.62
HDAC11-205ENST00000404548 CELF1Q92879 486 aaKnown RBP25.16■■□□□ 1.62
HDAC11-205ENST00000404548 TAF1P21675 1872 aa25.15■■□□□ 1.62
HDAC11-205ENST00000404548 HSPA8P11142 646 aaKnown RBP25.15■■□□□ 1.62
HDAC11-205ENST00000404548 LBX1P52954 281 aa25.15■■□□□ 1.62
HDAC11-205ENST00000404548 GNAI1P63096 354 aa25.15■■□□□ 1.62
HDAC11-205ENST00000404548 GOLGA2Q08379 1002 aa25.15■■□□□ 1.62
HDAC11-205ENST00000404548 WASHC4Q2M389 1173 aa25.15■■□□□ 1.62
HDAC11-205ENST00000404548 CHMP4AQ9BY43 222 aa25.15■■□□□ 1.62
HDAC11-205ENST00000404548 IRS4O14654 1257 aaPredicted RBP25.14■■□□□ 1.62
HDAC11-205ENST00000404548 SAPCD2Q86UD0 394 aa25.14■■□□□ 1.62
HDAC11-205ENST00000404548 ZBTB38Q8NAP3 1195 aaPredicted RBP25.14■■□□□ 1.62
HDAC11-205ENST00000404548 MAP2K2P36507 400 aa25.13■■□□□ 1.61
HDAC11-205ENST00000404548 HIRAP54198 1017 aaPredicted RBP25.13■■□□□ 1.61
HDAC11-205ENST00000404548 GPR101Q96P66 508 aaPredicted RBP25.13■■□□□ 1.61
HDAC11-205ENST00000404548 CNOT7Q9UIV1 285 aaKnown RBP25.13■■□□□ 1.61
HDAC11-205ENST00000404548 NSFL1CQ9UNZ2 370 aaKnown RBP25.13■■□□□ 1.61
HDAC11-205ENST00000404548 H7C1D1 291 aa25.12■■□□□ 1.61
HDAC11-205ENST00000404548 RPS12P25398 132 aaKnown RBP25.12■■□□□ 1.61
HDAC11-205ENST00000404548 CYP4F22Q6NT55 531 aa25.12■■□□□ 1.61
HDAC11-205ENST00000404548 CDC37L1Q7L3B6 337 aa25.12■■□□□ 1.61
HDAC11-205ENST00000404548 RIC3Q7Z5B4 369 aa25.12■■□□□ 1.61
HDAC11-205ENST00000404548 TRPM4Q8TD43 1214 aa25.12■■□□□ 1.61
HDAC11-205ENST00000404548 EYA3Q99504 573 aa25.12■■□□□ 1.61
HDAC11-205ENST00000404548 GLIS2Q9BZE0 524 aaPredicted RBP25.12■■□□□ 1.61
HDAC11-205ENST00000404548 APAF1O14727 1248 aa25.11■■□□□ 1.61
HDAC11-205ENST00000404548 CELF2O95319 508 aaKnown RBP25.11■■□□□ 1.61
HDAC11-205ENST00000404548 RPS8P62241 208 aaKnown RBP25.11■■□□□ 1.61
HDAC11-205ENST00000404548 MICALL2Q8IY33 904 aa25.11■■□□□ 1.61
HDAC11-205ENST00000404548 CCDC191Q8NCU4 936 aa25.11■■□□□ 1.61
HDAC11-205ENST00000404548 PODXL2Q9NZ53 605 aa25.11■■□□□ 1.61
HDAC11-205ENST00000404548 POLLQ9UGP5 575 aa25.11■■□□□ 1.61
HDAC11-205ENST00000404548 COL4A1P02462 1669 aa25.1■■□□□ 1.61
HDAC11-205ENST00000404548 GPSM2P81274 684 aa25.1■■□□□ 1.61
HDAC11-205ENST00000404548 PAXIP1Q6ZW49 1069 aaPredicted RBP25.1■■□□□ 1.61
HDAC11-205ENST00000404548 ZNF428Q96B54 188 aa25.1■■□□□ 1.61
HDAC11-205ENST00000404548 BEGAINQ9BUH8 593 aa25.1■■□□□ 1.61
HDAC11-205ENST00000404548 PSMD14O00487 310 aa25.09■■□□□ 1.61
HDAC11-205ENST00000404548 C6orf229H3BNL8 230 aa25.08■■□□□ 1.61
HDAC11-205ENST00000404548 PCCAP05165 728 aaPredicted RBP25.08■■□□□ 1.61
HDAC11-205ENST00000404548 RTL5Q5HYW3 569 aaPredicted RBP25.08■■□□□ 1.61
HDAC11-205ENST00000404548 TBC1D16Q8TBP0 767 aa25.08■■□□□ 1.61
HDAC11-205ENST00000404548 PHAXQ9H814 394 aaKnown RBP25.08■■□□□ 1.61
HDAC11-205ENST00000404548 DBNDD1Q9H9R9 158 aa25.08■■□□□ 1.61
HDAC11-205ENST00000404548 ZNF609O15014 1411 aa25.07■■□□□ 1.6
HDAC11-205ENST00000404548 CA12O43570 354 aa25.07■■□□□ 1.6
HDAC11-205ENST00000404548 ECE2O60344 883 aa25.06■■□□□ 1.6
HDAC11-205ENST00000404548 DDX58O95786 925 aaKnown RBP25.06■■□□□ 1.6
HDAC11-205ENST00000404548 CCDC152Q4G0S7 254 aa25.06■■□□□ 1.6
HDAC11-205ENST00000404548 ZBTB12Q9Y330 459 aaPredicted RBP25.06■■□□□ 1.6
HDAC11-205ENST00000404548 RTL9Q8NET4 1388 aa25.05■■□□□ 1.6
HDAC11-205ENST00000404548 SHTN1A0MZ66 631 aa25.05■■□□□ 1.6
HDAC11-205ENST00000404548 CCDC30Q5VVM6 783 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms