RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 KIF1BPQ96EK5 621 aa9.52□□□□□ -0.89
CHD8-201ENST00000399982 ZNF500O60304 480 aaPredicted RBP9.51□□□□□ -0.89
CHD8-201ENST00000399982 PPFIA1Q13136 1202 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 TTC12Q9H892 705 aaPredicted RBP9.51□□□□□ -0.89
CHD8-201ENST00000399982 IRX4P78413 519 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 CASKIN1Q8WXD9 1431 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 JADE2Q9NQC1 790 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 DNAI1Q9UI46 699 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 RAD54L2Q9Y4B4 1467 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 HDAC1Q13547 482 aaPredicted RBP9.51□□□□□ -0.89
CHD8-201ENST00000399982 CCDC170Q8IYT3 715 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 IMPACTQ9P2X3 320 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 ATP2A1O14983 1001 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 CCDC102BQ68D86 513 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 CNNM3Q8NE01 707 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 SIL1Q9H173 461 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 LARSQ9P2J5 1176 aaKnown RBP9.51□□□□□ -0.89
CHD8-201ENST00000399982 ZSCAN22P10073 491 aaPredicted RBP9.51□□□□□ -0.89
CHD8-201ENST00000399982 ZNF445P59923 1031 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 GRM1Q13255 1194 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 CAMK4Q16566 473 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 STMN2Q93045 179 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 C8orf76Q96K31 380 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 TMOD2Q9NZR1 351 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 SYCP3Q8IZU3 236 aa9.51□□□□□ -0.89
CHD8-201ENST00000399982 ATF3P18847 181 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 DDX27Q96GQ7 796 aaKnown RBP9.5□□□□□ -0.89
CHD8-201ENST00000399982 MPHOSPH8Q99549 860 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 CACYBPQ9HB71 228 aaKnown RBP9.5□□□□□ -0.89
CHD8-201ENST00000399982 AKAP2Q9Y2D5 859 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 PPFIA4O75335 1185 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 PPME1Q9Y570 386 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 DAPK1P53355 1430 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 NPHP3Q7Z494 1330 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 SLMAPQ14BN4 828 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 FSIP1Q8NA03 581 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 GOLGA5Q8TBA6 731 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 RAD50Q92878 1312 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 MROH2BQ7Z745 1585 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 BICDL2A1A5D9 508 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 BCAR3O75815 825 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 ZNF853P0CG23 659 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 NUTM2GQ5VZR2 741 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 PDCD7Q8N8D1 485 aaKnown RBP9.5□□□□□ -0.89
CHD8-201ENST00000399982 FAM114A2Q9NRY5 505 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 HMOX1P09601 288 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 RASSF2P50749 326 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 CFAP157Q5JU67 520 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 CRACR2BQ8N4Y2 399 aaPredicted RBP9.5□□□□□ -0.89
CHD8-201ENST00000399982 BICD1Q96G01 975 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 KIAA1107Q9UPP5 1409 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 RUFY4Q6ZNE9 571 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 DPH6Q7L8W6 267 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 CCDC186Q7Z3E2 898 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 CUL5Q93034 780 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 ANKRD50Q9ULJ7 1429 aa9.5□□□□□ -0.89
CHD8-201ENST00000399982 UBASH3AP57075 661 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 TRIM14Q14142 442 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 BRD3Q15059 726 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 UTP14AQ9BVJ6 771 aaKnown RBP9.49□□□□□ -0.89
CHD8-201ENST00000399982 KIF1CO43896 1103 aaKnown RBP9.49□□□□□ -0.89
CHD8-201ENST00000399982 HCLS1P14317 486 aaPredicted RBP9.49□□□□□ -0.89
CHD8-201ENST00000399982 TNNC1P63316 161 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 RLBP1P12271 317 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 NLRP2Q9NX02 1062 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 RABGAP1Q9Y3P9 1069 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 CIB2O75838 187 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 FCHSD2O94868 740 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 BCAP29Q9UHQ4 241 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 TACC3Q9Y6A5 838 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 MTHFSP49914 203 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 GSTA5Q7RTV2 222 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 ZNF287Q9HBT7 754 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 EFCAB5A4FU69 1503 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 PCK1P35558 622 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 LRRC43Q8N309 656 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 ANKRD24Q8TF21 1146 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 PDS5BQ9NTI5 1447 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 CASQ2O14958 399 aaPredicted RBP9.49□□□□□ -0.89
CHD8-201ENST00000399982 TAF12Q16514 161 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 CCDC14Q49A88 953 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 THEGQ9P2T0 379 aa9.49□□□□□ -0.89
CHD8-201ENST00000399982 MTRF1LQ9UGC7 380 aaKnown RBP9.49□□□□□ -0.89
CHD8-201ENST00000399982 NDUFAB1O14561 156 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 ATP2B3Q16720 1220 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 CNGA4Q8IV77 575 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 CPLX3Q8WVH0 158 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 MED4Q9NPJ6 270 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 STRN4Q9NRL3 753 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 CECR2Q9BXF3 1484 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 TCERG1LQ5VWI1 586 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 PPP1R2P41236 205 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 LCA5Q86VQ0 697 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 SAMM50Q9Y512 469 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 ERBINQ96RT1 1412 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 SRGAP3O43295 1099 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 RPAINQ86UA6 219 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 TXNDC16Q9P2K2 825 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 IL16Q14005 1332 aa9.48□□□□□ -0.89
CHD8-201ENST00000399982 PSMD6Q15008 389 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms