RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 PARD6BQ9BYG5 372 aa17.24■□□□□ 0.35
ITSN1-210ENST00000399353 EIF3CLB5ME19 914 aaKnown RBP17.23■□□□□ 0.35
ITSN1-210ENST00000399353 AKAP17AQ02040 695 aaKnown RBP17.23■□□□□ 0.35
ITSN1-210ENST00000399353 EIF3CQ99613 913 aaKnown RBP17.23■□□□□ 0.35
ITSN1-210ENST00000399353 FAN1Q9Y2M0 1017 aa17.23■□□□□ 0.35
ITSN1-210ENST00000399353 PTPRCP08575 1304 aa17.23■□□□□ 0.35
ITSN1-210ENST00000399353 CCP110O43303 1012 aa17.23■□□□□ 0.35
ITSN1-210ENST00000399353 VPS53Q5VIR6 699 aa17.23■□□□□ 0.35
ITSN1-210ENST00000399353 CCDC8Q9H0W5 538 aaPredicted RBP17.23■□□□□ 0.35
ITSN1-210ENST00000399353 TCHHQ07283 1943 aa17.23■□□□□ 0.35
ITSN1-210ENST00000399353 ADCY10Q96PN6 1610 aa17.22■□□□□ 0.35
ITSN1-210ENST00000399353 RPGRIP1LQ68CZ1 1315 aa17.22■□□□□ 0.35
ITSN1-210ENST00000399353 ATP8B2P98198 1209 aa17.22■□□□□ 0.35
ITSN1-210ENST00000399353 FLIIQ13045 1269 aa17.22■□□□□ 0.35
ITSN1-210ENST00000399353 LRRFIP1Q32MZ4 808 aaKnown RBP17.22■□□□□ 0.35
ITSN1-210ENST00000399353 RAB11FIP4Q86YS3 637 aa17.22■□□□□ 0.35
ITSN1-210ENST00000399353 ANKRD20A12PQ8NF67 263 aa17.22■□□□□ 0.35
ITSN1-210ENST00000399353 DESI2Q9BSY9 194 aa17.22■□□□□ 0.35
ITSN1-210ENST00000399353 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
ITSN1-210ENST00000399353 ZSCAN12O43309 604 aa17.22■□□□□ 0.35
ITSN1-210ENST00000399353 FOXO3O43524 673 aa17.22■□□□□ 0.35
ITSN1-210ENST00000399353 ERLIN1O75477 346 aa17.22■□□□□ 0.35
ITSN1-210ENST00000399353 SASH3O75995 380 aa17.22■□□□□ 0.35
ITSN1-210ENST00000399353 LONRF2Q1L5Z9 754 aa17.22■□□□□ 0.35
ITSN1-210ENST00000399353 AACSQ86V21 672 aa17.22■□□□□ 0.35
ITSN1-210ENST00000399353 NUDT16Q96DE0 195 aaKnown RBP17.22■□□□□ 0.35
ITSN1-210ENST00000399353 HINFPQ9BQA5 517 aa17.22■□□□□ 0.35
ITSN1-210ENST00000399353 ANXA1P04083 346 aa17.21■□□□□ 0.35
ITSN1-210ENST00000399353 CT47A1Q5JQC4 288 aaPredicted RBP17.21■□□□□ 0.35
ITSN1-210ENST00000399353 CC2D1AQ6P1N0 951 aaPredicted RBP17.21■□□□□ 0.35
ITSN1-210ENST00000399353 ZNF526Q8TF50 670 aaPredicted RBP17.21■□□□□ 0.35
ITSN1-210ENST00000399353 FAM227BQ96M60 508 aa17.21■□□□□ 0.35
ITSN1-210ENST00000399353 OSBPL3Q9H4L5 887 aa17.21■□□□□ 0.35
ITSN1-210ENST00000399353 IQSEC2Q5JU85 1478 aa17.21■□□□□ 0.35
ITSN1-210ENST00000399353 DNAJC21Q5F1R6 531 aaKnown RBP17.21■□□□□ 0.35
ITSN1-210ENST00000399353 CREB3L3Q68CJ9 461 aa17.21■□□□□ 0.35
ITSN1-210ENST00000399353 NSD2O96028 1365 aa17.21■□□□□ 0.35
ITSN1-210ENST00000399353 CAVIN2O95810 425 aa17.21■□□□□ 0.35
ITSN1-210ENST00000399353 TDO2P48775 406 aa17.21■□□□□ 0.35
ITSN1-210ENST00000399353 NCAPGQ9BPX3 1015 aa17.21■□□□□ 0.35
ITSN1-210ENST00000399353 SLC3A2P08195 630 aaKnown RBP17.2■□□□□ 0.34
ITSN1-210ENST00000399353 PPM1EQ8WY54 764 aa17.2■□□□□ 0.34
ITSN1-210ENST00000399353 LSG1Q9H089 658 aaKnown RBP17.2■□□□□ 0.34
ITSN1-210ENST00000399353 PLCH2O75038 1416 aa17.2■□□□□ 0.34
ITSN1-210ENST00000399353 UGGT1Q9NYU2 1555 aa17.2■□□□□ 0.34
ITSN1-210ENST00000399353 CTAGE5O15320 804 aa17.2■□□□□ 0.34
ITSN1-210ENST00000399353 MAP2K2P36507 400 aa17.2■□□□□ 0.34
ITSN1-210ENST00000399353 NLRP6P59044 892 aa17.2■□□□□ 0.34
ITSN1-210ENST00000399353 G3BP1Q13283 466 aaKnown RBP eCLIP17.2■□□□□ 0.34
ITSN1-210ENST00000399353 HSP90AB2PQ58FF8 381 aa17.2■□□□□ 0.34
ITSN1-210ENST00000399353 CCDC91Q7Z6B0 441 aa17.2■□□□□ 0.34
ITSN1-210ENST00000399353 TTC14Q96N46 770 aa17.2■□□□□ 0.34
ITSN1-210ENST00000399353 SYNE3Q6ZMZ3 975 aa17.2■□□□□ 0.34
ITSN1-210ENST00000399353 GOLGA1Q92805 767 aa17.2■□□□□ 0.34
ITSN1-210ENST00000399353 PACS2Q86VP3 889 aa17.19■□□□□ 0.34
ITSN1-210ENST00000399353 SUGCTQ9HAC7 445 aa17.19■□□□□ 0.34
ITSN1-210ENST00000399353 CLGNO14967 610 aa17.19■□□□□ 0.34
ITSN1-210ENST00000399353 GLRX3O76003 335 aaKnown RBP17.19■□□□□ 0.34
ITSN1-210ENST00000399353 RDXP35241 583 aaKnown RBP17.19■□□□□ 0.34
ITSN1-210ENST00000399353 NOP2P46087 812 aaKnown RBP17.19■□□□□ 0.34
ITSN1-210ENST00000399353 HDGFP51858 240 aaKnown RBP17.19■□□□□ 0.34
ITSN1-210ENST00000399353 ADGRL1O94910 1474 aa17.19■□□□□ 0.34
ITSN1-210ENST00000399353 WDHD1O75717 1129 aaPredicted RBP17.19■□□□□ 0.34
ITSN1-210ENST00000399353 DPCR1Q3MIW9 517 aa17.19■□□□□ 0.34
ITSN1-210ENST00000399353 OTUD7BQ6GQQ9 843 aa17.19■□□□□ 0.34
ITSN1-210ENST00000399353 KLHL34Q8N239 644 aa17.19■□□□□ 0.34
ITSN1-210ENST00000399353 GIMAP7Q8NHV1 300 aa17.19■□□□□ 0.34
ITSN1-210ENST00000399353 ELP1O95163 1332 aa17.19■□□□□ 0.34
ITSN1-210ENST00000399353 EFCAB8A8MWE9 144 aa17.18■□□□□ 0.34
ITSN1-210ENST00000399353 PES1O00541 588 aaKnown RBP17.18■□□□□ 0.34
ITSN1-210ENST00000399353 IQCB1Q15051 598 aa17.18■□□□□ 0.34
ITSN1-210ENST00000399353 ANKRD1Q15327 319 aa17.18■□□□□ 0.34
ITSN1-210ENST00000399353 SMARCC1Q92922 1105 aaPredicted RBP17.18■□□□□ 0.34
ITSN1-210ENST00000399353 ZNF396Q96N95 335 aaPredicted RBP17.18■□□□□ 0.34
ITSN1-210ENST00000399353 N4BP1O75113 896 aaKnown RBP17.18■□□□□ 0.34
ITSN1-210ENST00000399353 TBC1D8O95759 1140 aa17.18■□□□□ 0.34
ITSN1-210ENST00000399353 BICC1Q9H694 974 aaKnown RBP17.18■□□□□ 0.34
ITSN1-210ENST00000399353 ATP1A3P13637 1013 aa17.18■□□□□ 0.34
ITSN1-210ENST00000399353 ARMCX5Q6P1M9 558 aa17.18■□□□□ 0.34
ITSN1-210ENST00000399353 PA2G4Q9UQ80 394 aaKnown RBP17.18■□□□□ 0.34
ITSN1-210ENST00000399353 ACBD3Q9H3P7 528 aa17.17■□□□□ 0.34
ITSN1-210ENST00000399353 ARHGAP31Q2M1Z3 1444 aa17.17■□□□□ 0.34
ITSN1-210ENST00000399353 FANCCQ00597 558 aa17.17■□□□□ 0.34
ITSN1-210ENST00000399353 CCDC158Q5M9N0 1113 aa17.17■□□□□ 0.34
ITSN1-210ENST00000399353 EXOC4Q96A65 974 aa17.17■□□□□ 0.34
ITSN1-210ENST00000399353 CCDC61Q9Y6R9 512 aa17.17■□□□□ 0.34
ITSN1-210ENST00000399353 GUCY2CP25092 1073 aa17.17■□□□□ 0.34
ITSN1-210ENST00000399353 CHST3Q7LGC8 479 aa17.17■□□□□ 0.34
ITSN1-210ENST00000399353 KDM5AP29375 1690 aaKnown RBP17.17■□□□□ 0.34
ITSN1-210ENST00000399353 MAST1Q9Y2H9 1570 aa17.17■□□□□ 0.34
ITSN1-210ENST00000399353 ATP2B1P20020 1258 aa17.16■□□□□ 0.34
ITSN1-210ENST00000399353 MAGEA9P43362 315 aa17.16■□□□□ 0.34
ITSN1-210ENST00000399353 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
ITSN1-210ENST00000399353 FKBP15Q5T1M5 1219 aa17.16■□□□□ 0.34
ITSN1-210ENST00000399353 OLFM4Q6UX06 510 aa17.16■□□□□ 0.34
ITSN1-210ENST00000399353 GPR161Q8N6U8 529 aaKnown RBP17.16■□□□□ 0.34
ITSN1-210ENST00000399353 USP28Q96RU2 1077 aa17.16■□□□□ 0.34
ITSN1-210ENST00000399353 SLC52A1Q9NWF4 448 aa17.16■□□□□ 0.34
ITSN1-210ENST00000399353 GEMIN8Q9NWZ8 242 aaKnown RBP17.16■□□□□ 0.34
ITSN1-210ENST00000399353 RAI14Q9P0K7 980 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms