RNA–Protein interactions for RNA: ENST00000398977.2

MSANTD3-204, Transcript of Myb/SANT DNA binding domain containing 3, human

TSL 3

Gene MSANTD3, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSANTD3-204	ENST00000398977	APAF1	O14727	1248 aa		32.59	■■■□□ 2.81
MSANTD3-204	ENST00000398977	MPND	Q8N594	471 aa		32.59	■■■□□ 2.81
MSANTD3-204	ENST00000398977	IFT57	Q9NWB7	429 aa		32.58	■■■□□ 2.81
MSANTD3-204	ENST00000398977	ZNRF3	Q9ULT6	936 aa		32.58	■■■□□ 2.81
MSANTD3-204	ENST00000398977	TAF1	P21675	1872 aa		32.58	■■■□□ 2.81
MSANTD3-204	ENST00000398977	ATP5J2-PTCD1	G3V325	749 aa		32.57	■■■□□ 2.8
MSANTD3-204	ENST00000398977	LRRC37A	A6NMS7	1700 aa		32.57	■■■□□ 2.8
MSANTD3-204	ENST00000398977	CALD1	Q05682	793 aa	Known RBP	32.56	■■■□□ 2.8
MSANTD3-204	ENST00000398977	KIAA2012	Q0VF49	1180 aa		32.56	■■■□□ 2.8
MSANTD3-204	ENST00000398977	TMC4	Q7Z404	712 aa		32.56	■■■□□ 2.8
MSANTD3-204	ENST00000398977	FAM89A	Q96GI7	184 aa		32.56	■■■□□ 2.8
MSANTD3-204	ENST00000398977	DUOX1	Q9NRD9	1551 aa		32.55	■■■□□ 2.8
MSANTD3-204	ENST00000398977	GNAI1	P63096	354 aa		32.55	■■■□□ 2.8
MSANTD3-204	ENST00000398977	CXCL9	Q07325	125 aa		32.55	■■■□□ 2.8
MSANTD3-204	ENST00000398977	USP50	Q70EL3	339 aa	Predicted RBP	32.55	■■■□□ 2.8
MSANTD3-204	ENST00000398977	TNS4	Q8IZW8	715 aa		32.55	■■■□□ 2.8
MSANTD3-204	ENST00000398977	VEGFB	P49765	207 aa		32.53	■■■□□ 2.8
MSANTD3-204	ENST00000398977	TRIM28	Q13263	835 aa	Known RBP	32.53	■■■□□ 2.8
MSANTD3-204	ENST00000398977	SF3B3	Q15393	1217 aa	Known RBP	32.53	■■■□□ 2.8
MSANTD3-204	ENST00000398977	GPRC5D	Q9NZD1	345 aa		32.53	■■■□□ 2.8
MSANTD3-204	ENST00000398977	ADARB2	Q9NS39	739 aa	Known RBP	32.51	■■■□□ 2.79
MSANTD3-204	ENST00000398977	RASSF10	A6NK89	507 aa		32.5	■■■□□ 2.79
MSANTD3-204	ENST00000398977	GOLGA2	Q08379	1002 aa		32.5	■■■□□ 2.79
MSANTD3-204	ENST00000398977	GMPS	P49915	693 aa	Predicted RBP	32.49	■■■□□ 2.79
MSANTD3-204	ENST00000398977	RTL5	Q5HYW3	569 aa	Predicted RBP	32.49	■■■□□ 2.79
MSANTD3-204	ENST00000398977	CIAPIN1	Q6FI81	312 aa		32.49	■■■□□ 2.79
MSANTD3-204	ENST00000398977	RIC3	Q7Z5B4	369 aa		32.49	■■■□□ 2.79
MSANTD3-204	ENST00000398977	CELF1	Q92879	486 aa	Known RBP	32.49	■■■□□ 2.79
MSANTD3-204	ENST00000398977	ELL2	O00472	640 aa	Predicted RBP	32.48	■■■□□ 2.79
MSANTD3-204	ENST00000398977	IRS4	O14654	1257 aa	Predicted RBP	32.48	■■■□□ 2.79
MSANTD3-204	ENST00000398977	PHAX	Q9H814	394 aa	Known RBP	32.48	■■■□□ 2.79
MSANTD3-204	ENST00000398977	CDHR2	Q9BYE9	1310 aa		32.48	■■■□□ 2.79
MSANTD3-204	ENST00000398977	COL4A1	P02462	1669 aa		32.47	■■■□□ 2.79
MSANTD3-204	ENST00000398977	RAD17	O75943	681 aa		32.46	■■■□□ 2.79
MSANTD3-204	ENST00000398977	DEFB115	Q30KQ5	88 aa		32.46	■■■□□ 2.79
MSANTD3-204	ENST00000398977	C8orf58	Q8NAV2	365 aa		32.46	■■■□□ 2.79
MSANTD3-204	ENST00000398977	ABT1	Q9ULW3	272 aa	Known RBP	32.46	■■■□□ 2.79
MSANTD3-204	ENST00000398977	FOXN1	O15353	648 aa		32.45	■■■□□ 2.79
MSANTD3-204	ENST00000398977	TNIP1	Q15025	636 aa		32.45	■■■□□ 2.79
MSANTD3-204	ENST00000398977	YDJC	A8MPS7	323 aa		32.44	■■■□□ 2.78
MSANTD3-204	ENST00000398977	FMR1	Q06787	632 aa	Known RBP eCLIP	32.44	■■■□□ 2.78
MSANTD3-204	ENST00000398977	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.44	■■■□□ 2.78
MSANTD3-204	ENST00000398977	TRPM7	Q96QT4	1865 aa		32.44	■■■□□ 2.78
MSANTD3-204	ENST00000398977	BCL2L13	Q9BXK5	485 aa		32.43	■■■□□ 2.78
MSANTD3-204	ENST00000398977	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.43	■■■□□ 2.78
MSANTD3-204	ENST00000398977	TRAF5	O00463	557 aa		32.42	■■■□□ 2.78
MSANTD3-204	ENST00000398977	MYD88	Q99836	296 aa		32.42	■■■□□ 2.78
MSANTD3-204	ENST00000398977	WASHC4	Q2M389	1173 aa		32.41	■■■□□ 2.78
MSANTD3-204	ENST00000398977	AIDA	Q96BJ3	306 aa		32.41	■■■□□ 2.78
MSANTD3-204	ENST00000398977	HSP90B1	P14625	803 aa	Known RBP	32.4	■■■□□ 2.78
MSANTD3-204	ENST00000398977	GPSM2	P81274	684 aa		32.4	■■■□□ 2.78
MSANTD3-204	ENST00000398977	CCDC30	Q5VVM6	783 aa		32.4	■■■□□ 2.78
MSANTD3-204	ENST00000398977	CCDC191	Q8NCU4	936 aa		32.4	■■■□□ 2.78
MSANTD3-204	ENST00000398977	CHMP4A	Q9BY43	222 aa		32.4	■■■□□ 2.78
MSANTD3-204	ENST00000398977	WBP1L	Q9NX94	342 aa		32.4	■■■□□ 2.78
MSANTD3-204	ENST00000398977	RPS8	P62241	208 aa	Known RBP	32.39	■■■□□ 2.78
MSANTD3-204	ENST00000398977	POLL	Q9UGP5	575 aa		32.39	■■■□□ 2.78
MSANTD3-204	ENST00000398977	WDR33	Q9C0J8	1336 aa	Known RBP	32.39	■■■□□ 2.78
MSANTD3-204	ENST00000398977	C6orf229	H3BNL8	230 aa		32.38	■■■□□ 2.77
MSANTD3-204	ENST00000398977	CAPN15	O75808	1086 aa		32.38	■■■□□ 2.77
MSANTD3-204	ENST00000398977	CST9	Q5W186	159 aa		32.38	■■■□□ 2.77
MSANTD3-204	ENST00000398977	DDX58	O95786	925 aa	Known RBP	32.37	■■■□□ 2.77
MSANTD3-204	ENST00000398977	PCCA	P05165	728 aa	Predicted RBP	32.37	■■■□□ 2.77
MSANTD3-204	ENST00000398977	CTCF	P49711	727 aa	Predicted RBP	32.37	■■■□□ 2.77
MSANTD3-204	ENST00000398977	CCDC184	Q52MB2	194 aa		32.37	■■■□□ 2.77
MSANTD3-204	ENST00000398977	DBNDD1	Q9H9R9	158 aa		32.37	■■■□□ 2.77
MSANTD3-204	ENST00000398977	PGAP2	Q9UHJ9	254 aa		32.37	■■■□□ 2.77
MSANTD3-204	ENST00000398977	TSPYL6	Q8N831	410 aa		32.36	■■■□□ 2.77
MSANTD3-204	ENST00000398977	TRPM4	Q8TD43	1214 aa		32.36	■■■□□ 2.77
MSANTD3-204	ENST00000398977	ZC3H15	Q8WU90	426 aa	Known RBP	32.36	■■■□□ 2.77
MSANTD3-204	ENST00000398977	METTL22	Q9BUU2	404 aa	Predicted RBP	32.36	■■■□□ 2.77
MSANTD3-204	ENST00000398977	PRDM10	Q9NQV6	1147 aa		32.36	■■■□□ 2.77
MSANTD3-204	ENST00000398977	CWC25	Q9NXE8	425 aa	Predicted RBP	32.36	■■■□□ 2.77
MSANTD3-204	ENST00000398977	CNOT7	Q9UIV1	285 aa	Known RBP	32.36	■■■□□ 2.77
MSANTD3-204	ENST00000398977	THSD7B	Q9C0I4	1608 aa		32.36	■■■□□ 2.77
MSANTD3-204	ENST00000398977	RIMBP2	O15034	1052 aa		32.35	■■■□□ 2.77
MSANTD3-204	ENST00000398977	HIRA	P54198	1017 aa	Predicted RBP	32.35	■■■□□ 2.77
MSANTD3-204	ENST00000398977	EYA3	Q99504	573 aa		32.35	■■■□□ 2.77
MSANTD3-204	ENST00000398977	SEC31B	Q9NQW1	1179 aa		32.35	■■■□□ 2.77
MSANTD3-204	ENST00000398977	SHTN1	A0MZ66	631 aa		32.34	■■■□□ 2.77
MSANTD3-204	ENST00000398977	PSMD14	O00487	310 aa		32.34	■■■□□ 2.77
MSANTD3-204	ENST00000398977	MICALL2	Q8IY33	904 aa		32.34	■■■□□ 2.77
MSANTD3-204	ENST00000398977	TBC1D16	Q8TBP0	767 aa		32.34	■■■□□ 2.77
MSANTD3-204	ENST00000398977	TSR2	Q969E8	191 aa	Known RBP	32.34	■■■□□ 2.77
MSANTD3-204	ENST00000398977	GLIS2	Q9BZE0	524 aa	Predicted RBP	32.34	■■■□□ 2.77
MSANTD3-204	ENST00000398977	TLL2	Q9Y6L7	1015 aa		32.34	■■■□□ 2.77
MSANTD3-204	ENST00000398977	PDE8A	O60658	829 aa		32.33	■■■□□ 2.77
MSANTD3-204	ENST00000398977	CCDC27	Q2M243	656 aa		32.33	■■■□□ 2.77
MSANTD3-204	ENST00000398977	CCDC152	Q4G0S7	254 aa		32.33	■■■□□ 2.77
MSANTD3-204	ENST00000398977	DPF2	Q92785	391 aa		32.33	■■■□□ 2.77
MSANTD3-204	ENST00000398977	CAPNS2	Q96L46	248 aa		32.33	■■■□□ 2.77
MSANTD3-204	ENST00000398977	ZBTB12	Q9Y330	459 aa	Predicted RBP	32.33	■■■□□ 2.77
MSANTD3-204	ENST00000398977		H7C1D1	291 aa		32.32	■■■□□ 2.76
MSANTD3-204	ENST00000398977	ECE2	O60344	883 aa		32.32	■■■□□ 2.76
MSANTD3-204	ENST00000398977	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.32	■■■□□ 2.76
MSANTD3-204	ENST00000398977	PODXL2	Q9NZ53	605 aa		32.32	■■■□□ 2.76
MSANTD3-204	ENST00000398977	MAP3K2	Q9Y2U5	619 aa		32.32	■■■□□ 2.76
MSANTD3-204	ENST00000398977	ECE1	P42892	770 aa		32.31	■■■□□ 2.76
MSANTD3-204	ENST00000398977	MAP2K1	Q02750	393 aa	Predicted RBP	32.31	■■■□□ 2.76
MSANTD3-204	ENST00000398977	JARID2	Q92833	1246 aa	Predicted RBP	32.31	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms