RNA–Protein interactions for RNA: ENST00000398896.5

USP19-204, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP19, Length 3,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-204ENST00000398896 CCT4P50991 539 aaKnown RBP12.33□□□□□ -0.44
USP19-204ENST00000398896 TUBB4BP68371 445 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 CCZ1BP86790 482 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 CCZ1P86791 482 aaPredicted RBP12.33□□□□□ -0.44
USP19-204ENST00000398896 MAP9Q49MG5 647 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 OTUD6BQ8N6M0 293 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 FSIP1Q8NA03 581 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 CHMP7Q8WUX9 453 aaPredicted RBP12.33□□□□□ -0.44
USP19-204ENST00000398896 RTL1A6NKG5 1358 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 TXLNAP40222 546 aa12.32□□□□□ -0.44
USP19-204ENST00000398896 CHMP4BP1P59074 171 aa12.32□□□□□ -0.44
USP19-204ENST00000398896 OLFM4Q6UX06 510 aa12.32□□□□□ -0.44
USP19-204ENST00000398896 RUFY3Q7L099 469 aa12.32□□□□□ -0.44
USP19-204ENST00000398896 NUTM1Q86Y26 1132 aa12.32□□□□□ -0.44
USP19-204ENST00000398896 CEP112Q8N8E3 955 aa12.32□□□□□ -0.44
USP19-204ENST00000398896 N4BP2L2Q92802 583 aaPredicted RBP12.32□□□□□ -0.44
USP19-204ENST00000398896 PAIP2Q9BPZ3 127 aaKnown RBP12.32□□□□□ -0.44
USP19-204ENST00000398896 ATG3Q9NT62 314 aa12.32□□□□□ -0.44
USP19-204ENST00000398896 RPAP1Q9BWH6 1393 aaPredicted RBP12.32□□□□□ -0.44
USP19-204ENST00000398896 EIF4G3O43432 1585 aaKnown RBP12.32□□□□□ -0.44
USP19-204ENST00000398896 BICRAQ9NZM4 1560 aa12.32□□□□□ -0.44
USP19-204ENST00000398896 A0A1B0GUA9 196 aa12.32□□□□□ -0.44
USP19-204ENST00000398896 NOC3LQ8WTT2 800 aaKnown RBP12.32□□□□□ -0.44
USP19-204ENST00000398896 TAOK2Q9UL54 1235 aa12.32□□□□□ -0.44
USP19-204ENST00000398896 CFAP74Q9C0B2 1584 aa12.32□□□□□ -0.44
USP19-204ENST00000398896 C8orf58Q8NAV2 365 aa12.32□□□□□ -0.44
USP19-204ENST00000398896 SYNMO15061 1565 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 WDHD1O75717 1129 aaPredicted RBP12.31□□□□□ -0.44
USP19-204ENST00000398896 TUBBP07437 444 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 UBASH3AP57075 661 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 VPS53Q5VIR6 699 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 IQUBQ8NA54 791 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 FAM71BQ8TC56 605 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 XPO4Q9C0E2 1151 aaKnown RBP12.31□□□□□ -0.44
USP19-204ENST00000398896 CABP2Q9NPB3 220 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 GNL3LQ9NVN8 582 aaKnown RBP12.31□□□□□ -0.44
USP19-204ENST00000398896 BIN1O00499 593 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 AKAP17AQ02040 695 aaKnown RBP12.31□□□□□ -0.44
USP19-204ENST00000398896 CDC37L1Q7L3B6 337 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 CEP57Q86XR8 500 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 PTPRGP23470 1445 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 EPB41L2O43491 1005 aaKnown RBP12.31□□□□□ -0.44
USP19-204ENST00000398896 RHOXF2BP0C7M4 288 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
USP19-204ENST00000398896 CLNS1AP54105 237 aaKnown RBP12.31□□□□□ -0.44
USP19-204ENST00000398896 GSCP56915 257 aaPredicted RBP12.31□□□□□ -0.44
USP19-204ENST00000398896 E4F1Q66K89 784 aaPredicted RBP12.31□□□□□ -0.44
USP19-204ENST00000398896 TTC19Q6DKK2 380 aaPredicted RBP12.31□□□□□ -0.44
USP19-204ENST00000398896 RHOXF2Q9BQY4 288 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 OSBPL3Q9H4L5 887 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 RNF187Q5TA31 235 aaPredicted RBP12.31□□□□□ -0.44
USP19-204ENST00000398896 MICALCLQ6ZW33 695 aa12.31□□□□□ -0.44
USP19-204ENST00000398896 BICC1Q9H694 974 aaKnown RBP12.31□□□□□ -0.44
USP19-204ENST00000398896 TRPM1Q7Z4N2 1603 aa12.3□□□□□ -0.44
USP19-204ENST00000398896 FOXR1Q6PIV2 292 aa12.3□□□□□ -0.44
USP19-204ENST00000398896 C11orf57Q6ZUT1 292 aaPredicted RBP12.3□□□□□ -0.44
USP19-204ENST00000398896 LRRN4CLQ8ND94 238 aa12.3□□□□□ -0.44
USP19-204ENST00000398896 NAA25Q14CX7 972 aa12.3□□□□□ -0.44
USP19-204ENST00000398896 STK38Q15208 465 aa12.3□□□□□ -0.44
USP19-204ENST00000398896 NAIF1Q69YI7 327 aaPredicted RBP12.3□□□□□ -0.44
USP19-204ENST00000398896 TRIM6Q9C030 488 aaPredicted RBP12.3□□□□□ -0.44
USP19-204ENST00000398896 FAM204AQ9H8W3 233 aa12.3□□□□□ -0.44
USP19-204ENST00000398896 CEP170Q5SW79 1584 aa12.3□□□□□ -0.44
USP19-204ENST00000398896 TMEM132EQ6IEE7 984 aa12.3□□□□□ -0.44
USP19-204ENST00000398896 ANKRD18AQ8IVF6 992 aa12.3□□□□□ -0.44
USP19-204ENST00000398896 CTCFLQ8NI51 663 aaPredicted RBP12.3□□□□□ -0.44
USP19-204ENST00000398896 ZSCAN16Q9H4T2 348 aaPredicted RBP12.3□□□□□ -0.44
USP19-204ENST00000398896 TOPBP1Q92547 1522 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 MCM3P25205 808 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 HNRNPH1P31943 449 aaKnown RBP12.29□□□□□ -0.44
USP19-204ENST00000398896 GCKP35557 465 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.29□□□□□ -0.44
USP19-204ENST00000398896 REXO1L1PQ8IX06 675 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 CAPN7Q9Y6W3 813 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 SSH2Q76I76 1423 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 CTAGE15A4D2H0 777 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 CTAGE8P0CG41 777 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 EZRP15311 586 aaKnown RBP12.29□□□□□ -0.44
USP19-204ENST00000398896 ERCC3P19447 782 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 ELF1P32519 619 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 CTAGE6Q86UF2 777 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 CTAGE4Q8IX94 777 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 ODF2LQ9ULJ1 636 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 LAMC3Q9Y6N6 1575 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 CLSTN1O94985 981 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 SLC3A2P08195 630 aaKnown RBP12.29□□□□□ -0.44
USP19-204ENST00000398896 GBP2P32456 591 aaPredicted RBP12.29□□□□□ -0.44
USP19-204ENST00000398896 CCT5P48643 541 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 IRX1P78414 480 aaPredicted RBP12.29□□□□□ -0.44
USP19-204ENST00000398896 FBXW10Q5XX13 1052 aa12.29□□□□□ -0.44
USP19-204ENST00000398896 SPATS2LQ9NUQ6 558 aaKnown RBP12.29□□□□□ -0.44
USP19-204ENST00000398896 SASH3O75995 380 aa12.28□□□□□ -0.44
USP19-204ENST00000398896 CABS1Q96KC9 395 aa12.28□□□□□ -0.44
USP19-204ENST00000398896 OSBPL5Q9H0X9 879 aaPredicted RBP12.28□□□□□ -0.44
USP19-204ENST00000398896 KARSQ15046 597 aaKnown RBP12.28□□□□□ -0.44
USP19-204ENST00000398896 LARP1Q6PKG0 1096 aaKnown RBP12.28□□□□□ -0.44
USP19-204ENST00000398896 CCDC148Q8NFR7 591 aa12.28□□□□□ -0.44
USP19-204ENST00000398896 FAM76AQ8TAV0 307 aa12.28□□□□□ -0.44
USP19-204ENST00000398896 PLEKHF1Q96S99 279 aa12.28□□□□□ -0.44
USP19-204ENST00000398896 FUT8Q9BYC5 575 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms