RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 TPTE2Q6XPS3 522 aa22.55■■□□□ 1.2
MBD1-208ENST00000398493 LRRCC1Q9C099 1032 aa22.55■■□□□ 1.2
MBD1-208ENST00000398493 GOLGB1Q14789 3259 aaKnown RBP22.55■■□□□ 1.2
MBD1-208ENST00000398493 CDC45O75419 566 aa22.54■■□□□ 1.2
MBD1-208ENST00000398493 C16orf71Q8IYS4 520 aaPredicted RBP22.54■■□□□ 1.2
MBD1-208ENST00000398493 CNBD1Q8NA66 436 aa22.54■■□□□ 1.2
MBD1-208ENST00000398493 PNMA6EA0A0J9YXQ4 647 aa22.54■■□□□ 1.2
MBD1-208ENST00000398493 H7C1W4 665 aa22.54■■□□□ 1.2
MBD1-208ENST00000398493 SMARCA5O60264 1052 aaPredicted RBP22.54■■□□□ 1.2
MBD1-208ENST00000398493 ZBTB38Q8NAP3 1195 aaPredicted RBP22.54■■□□□ 1.2
MBD1-208ENST00000398493 SSH3Q8TE77 659 aa22.54■■□□□ 1.2
MBD1-208ENST00000398493 C9orf78Q9NZ63 289 aaPredicted RBP22.54■■□□□ 1.2
MBD1-208ENST00000398493 ABCC12Q96J65 1359 aa22.54■■□□□ 1.2
MBD1-208ENST00000398493 RAB11FIP3O75154 756 aa22.53■■□□□ 1.2
MBD1-208ENST00000398493 NBPF7P0C2Y1 421 aaPredicted RBP22.53■■□□□ 1.2
MBD1-208ENST00000398493 BCL11AQ9H165 835 aa22.53■■□□□ 1.2
MBD1-208ENST00000398493 AFDNP55196 1824 aaKnown RBP22.53■■□□□ 1.2
MBD1-208ENST00000398493 PCCAP05165 728 aaPredicted RBP22.52■■□□□ 1.2
MBD1-208ENST00000398493 CASP7P55210 303 aa22.52■■□□□ 1.2
MBD1-208ENST00000398493 NYXQ9GZU5 481 aa22.52■■□□□ 1.2
MBD1-208ENST00000398493 EXOC6BQ9Y2D4 811 aa22.52■■□□□ 1.2
MBD1-208ENST00000398493 SH3TC1Q8TE82 1336 aa22.52■■□□□ 1.2
MBD1-208ENST00000398493 GTF2E1P29083 439 aaPredicted RBP22.52■■□□□ 1.2
MBD1-208ENST00000398493 UBE3BQ7Z3V4 1068 aa22.52■■□□□ 1.2
MBD1-208ENST00000398493 IBTKQ9P2D0 1353 aaPredicted RBP22.51■■□□□ 1.19
MBD1-208ENST00000398493 GRM8O00222 908 aa22.51■■□□□ 1.19
MBD1-208ENST00000398493 NPHP1O15259 732 aa22.51■■□□□ 1.19
MBD1-208ENST00000398493 HCLS1P14317 486 aaPredicted RBP22.51■■□□□ 1.19
MBD1-208ENST00000398493 CASC1Q6TDU7 716 aa22.51■■□□□ 1.19
MBD1-208ENST00000398493 OSBPL3Q9H4L5 887 aa22.51■■□□□ 1.19
MBD1-208ENST00000398493 NRXN2Q9P2S2 1712 aa22.51■■□□□ 1.19
MBD1-208ENST00000398493 HSP90AB4PQ58FF6 505 aa22.5■■□□□ 1.19
MBD1-208ENST00000398493 C3orf67Q6ZVT6 689 aa22.5■■□□□ 1.19
MBD1-208ENST00000398493 SLC4A3P48751 1232 aa22.5■■□□□ 1.19
MBD1-208ENST00000398493 POLA2Q14181 598 aa22.5■■□□□ 1.19
MBD1-208ENST00000398493 TBC1D9Q6ZT07 1266 aa22.5■■□□□ 1.19
MBD1-208ENST00000398493 IRS4O14654 1257 aaPredicted RBP22.49■■□□□ 1.19
MBD1-208ENST00000398493 GSPT1P15170 499 aaKnown RBP22.49■■□□□ 1.19
MBD1-208ENST00000398493 SRGAP3O43295 1099 aa22.48■■□□□ 1.19
MBD1-208ENST00000398493 ST5P78524 1137 aa22.48■■□□□ 1.19
MBD1-208ENST00000398493 SLC10A5Q5PT55 438 aa22.48■■□□□ 1.19
MBD1-208ENST00000398493 UTYO14607 1347 aa22.48■■□□□ 1.19
MBD1-208ENST00000398493 RBM25P49756 843 aaKnown RBP22.47■■□□□ 1.19
MBD1-208ENST00000398493 KAZALD1Q96I82 304 aa22.47■■□□□ 1.19
MBD1-208ENST00000398493 PPP1R1BQ9UD71 204 aaPredicted RBP22.47■■□□□ 1.19
MBD1-208ENST00000398493 C10orf71Q711Q0 1435 aa22.47■■□□□ 1.19
MBD1-208ENST00000398493 SURF6O75683 361 aaKnown RBP22.47■■□□□ 1.19
MBD1-208ENST00000398493 PDE1AP54750 535 aa22.47■■□□□ 1.19
MBD1-208ENST00000398493 EPHA10Q5JZY3 1008 aa22.47■■□□□ 1.19
MBD1-208ENST00000398493 KLHL34Q8N239 644 aa22.47■■□□□ 1.19
MBD1-208ENST00000398493 OTUD7AQ8TE49 926 aaPredicted RBP22.47■■□□□ 1.19
MBD1-208ENST00000398493 SUCLG2Q96I99 432 aa22.47■■□□□ 1.19
MBD1-208ENST00000398493 BRIP1Q9BX63 1249 aa22.46■■□□□ 1.19
MBD1-208ENST00000398493 CDHR2Q9BYE9 1310 aa22.46■■□□□ 1.19
MBD1-208ENST00000398493 MTX1Q13505 466 aa22.45■■□□□ 1.19
MBD1-208ENST00000398493 UTRNP46939 3433 aa22.45■■□□□ 1.18
MBD1-208ENST00000398493 KIF1BPQ96EK5 621 aa22.44■■□□□ 1.18
MBD1-208ENST00000398493 SDSP20132 328 aa22.43■■□□□ 1.18
MBD1-208ENST00000398493 MX1P20591 662 aa22.43■■□□□ 1.18
MBD1-208ENST00000398493 FHDC1Q9C0D6 1143 aaPredicted RBP22.43■■□□□ 1.18
MBD1-208ENST00000398493 TNRC6CQ9HCJ0 1690 aaKnown RBP22.43■■□□□ 1.18
MBD1-208ENST00000398493 KLRG2A4D1S0 409 aaPredicted RBP22.43■■□□□ 1.18
MBD1-208ENST00000398493 CHRNA5P30532 468 aa22.43■■□□□ 1.18
MBD1-208ENST00000398493 FOXO4P98177 505 aa22.43■■□□□ 1.18
MBD1-208ENST00000398493 CCDC85AQ96PX6 553 aaPredicted RBP22.43■■□□□ 1.18
MBD1-208ENST00000398493 PDE8AO60658 829 aa22.42■■□□□ 1.18
MBD1-208ENST00000398493 NLGN2Q8NFZ4 835 aa22.42■■□□□ 1.18
MBD1-208ENST00000398493 NLRP3Q96P20 1036 aa22.42■■□□□ 1.18
MBD1-208ENST00000398493 PLA2G12BQ9BX93 195 aa22.42■■□□□ 1.18
MBD1-208ENST00000398493 STAP2Q9UGK3 403 aa22.42■■□□□ 1.18
MBD1-208ENST00000398493 ANKRD31Q8N7Z5 1873 aa22.42■■□□□ 1.18
MBD1-208ENST00000398493 AOX1Q06278 1338 aa22.41■■□□□ 1.18
MBD1-208ENST00000398493 RHPN1Q8TCX5 695 aa22.41■■□□□ 1.18
MBD1-208ENST00000398493 CD2APQ9Y5K6 639 aa22.41■■□□□ 1.18
MBD1-208ENST00000398493 DDX60Q8IY21 1712 aaKnown RBP22.41■■□□□ 1.18
MBD1-208ENST00000398493 A0A0G2JLW4 131 aa22.41■■□□□ 1.18
MBD1-208ENST00000398493 PDE6BP35913 854 aa22.41■■□□□ 1.18
MBD1-208ENST00000398493 BICC1Q9H694 974 aaKnown RBP22.41■■□□□ 1.18
MBD1-208ENST00000398493 SALL3Q9BXA9 1300 aa22.4■■□□□ 1.18
MBD1-208ENST00000398493 OS9Q13438 667 aaPredicted RBP22.4■■□□□ 1.18
MBD1-208ENST00000398493 CRY2Q49AN0 593 aa22.4■■□□□ 1.18
MBD1-208ENST00000398493 ERC1Q8IUD2 1116 aa22.4■■□□□ 1.18
MBD1-208ENST00000398493 TTLL11Q8NHH1 800 aa22.4■■□□□ 1.18
MBD1-208ENST00000398493 RIC1Q4ADV7 1423 aa22.4■■□□□ 1.18
MBD1-208ENST00000398493 SRGNP10124 158 aa22.39■■□□□ 1.17
MBD1-208ENST00000398493 DPEP1P16444 411 aa22.39■■□□□ 1.17
MBD1-208ENST00000398493 KCNA3P22001 575 aa22.39■■□□□ 1.17
MBD1-208ENST00000398493 CTSWP56202 376 aa22.39■■□□□ 1.17
MBD1-208ENST00000398493 NBR1Q14596 966 aa22.39■■□□□ 1.17
MBD1-208ENST00000398493 C2CD5Q86YS7 1000 aa22.39■■□□□ 1.17
MBD1-208ENST00000398493 SYT17Q9BSW7 474 aa22.39■■□□□ 1.17
MBD1-208ENST00000398493 CSF1RP07333 972 aa22.38■■□□□ 1.17
MBD1-208ENST00000398493 SF3B3Q15393 1217 aaKnown RBP22.38■■□□□ 1.17
MBD1-208ENST00000398493 TBC1D2Q9BYX2 928 aa22.38■■□□□ 1.17
MBD1-208ENST00000398493 LMBR1LQ6UX01 489 aa22.38■■□□□ 1.17
MBD1-208ENST00000398493 KIF13BQ9NQT8 1826 aa22.37■■□□□ 1.17
MBD1-208ENST00000398493 TGFB2P61812 414 aa22.37■■□□□ 1.17
MBD1-208ENST00000398493 GREM2Q9H772 168 aa22.37■■□□□ 1.17
MBD1-208ENST00000398493 SEC31BQ9NQW1 1179 aa22.37■■□□□ 1.17
MBD1-208ENST00000398493 WWC3Q9ULE0 1092 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms