RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 LARP1BQ659C4 914 aaKnown RBP7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 DPH6Q7L8W6 267 aa7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 MICALL1Q8N3F8 863 aa7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 FNBP4Q8N3X1 1017 aaPredicted RBP7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 VPS37AQ8NEZ2 397 aa7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 C8orf37Q96NL8 207 aa7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 SEZ6LQ9BYH1 1024 aa7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 RETREG1Q9H6L5 497 aa7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 H0YHG0 523 aa7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 TULP2O00295 520 aa7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 NBPF7P0C2Y1 421 aaPredicted RBP7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 SARNPP82979 210 aaKnown RBP7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 ITPRIPQ8IWB1 547 aa7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 C14orf93Q9H972 538 aaKnown RBP7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 NRKQ7Z2Y5 1582 aa7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 DDX11L8A8MPP1 907 aa7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 KCNA2P16389 499 aa7.8□□□□□ -1.16
TM9SF4-202ENST00000398022 TIMM44O43615 452 aa7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 ONECUT3O60422 494 aaPredicted RBP7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 RLBP1P12271 317 aa7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 PROSER2Q86WR7 435 aaPredicted RBP7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 ANKRD13BQ86YJ7 626 aa7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 CCAR1Q8IX12 1150 aaKnown RBP7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 UTP6Q9NYH9 597 aaKnown RBP7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 IQSEC3Q9UPP2 1182 aaPredicted RBP7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 EIF5P55010 431 aaKnown RBP7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 LARGE2Q8N3Y3 721 aa7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 NEUROD6Q96NK8 337 aa7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 SND1Q7KZF4 910 aaKnown RBP eCLIP7.79□□□□□ -1.165e-10■■■□□ 16.8
TM9SF4-202ENST00000398022 IQCF2Q8IXL9 164 aa7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 CDC5LQ99459 802 aaKnown RBP7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 NOL10Q9BSC4 688 aaKnown RBP7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 KLF15Q9UIH9 416 aa7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 DIS3Q9Y2L1 958 aaKnown RBP7.79□□□□□ -1.16
TM9SF4-202ENST00000398022 MCM4P33991 863 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 EVA1CP58658 441 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 AMOTQ4VCS5 1084 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 FAM117AQ9C073 453 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 GOLGA6L22H0YM25 854 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 CCDC175P0C221 793 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 RPS6KC1Q96S38 1066 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 ANTXR1Q9H6X2 564 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 ABCC11Q96J66 1382 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 ATICP31939 592 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 DDX17Q92841 729 aaKnown RBP7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 LZTS2Q9BRK4 669 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 IFT122Q9HBG6 1241 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 ANKRD36BQ8N2N9 1353 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 TRPC1P48995 793 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 CC2D1AQ6P1N0 951 aaPredicted RBP7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 POLR3CQ9BUI4 534 aaPredicted RBP7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 ZNF232Q9UNY5 417 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 IVNS1ABPQ9Y6Y0 642 aa7.78□□□□□ -1.16
TM9SF4-202ENST00000398022 LMNB1P20700 586 aa7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 MAGEA8P43361 318 aa7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 CCDC92Q53HC0 331 aaPredicted RBP7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 ATF7IPQ6VMQ6 1270 aa7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 TEX13AQ9BXU3 409 aaPredicted RBP7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 ZMYND10O75800 440 aa7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 CCDC73Q6ZRK6 1079 aa7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 KIAA1211Q6ZU35 1233 aa7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 DISP2A7MBM2 1401 aa7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 AFF2P51816 1311 aa7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 EXOSC9Q06265 439 aaKnown RBP7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 TRDNQ13061 729 aa7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 PTPROQ16827 1216 aa7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 TMEM132EQ6IEE7 984 aa7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 GBP4Q96PP9 640 aa7.77□□□□□ -1.17
TM9SF4-202ENST00000398022 ANKRD18BA2A2Z9 1011 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 HOXA2O43364 376 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 SAMD3Q8N6K7 520 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 FMNL2Q96PY5 1086 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 GOPCQ9HD26 462 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 SUFUQ9UMX1 484 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 LRRC37A3O60309 1634 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 HSP90AB1P08238 724 aaKnown RBP7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 MRE11P49959 708 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 SRPK2P78362 688 aaKnown RBP7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 SMCR8Q8TEV9 937 aaPredicted RBP7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 TNNQ9UQP3 1299 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 SCINQ9Y6U3 715 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 PAPPAQ13219 1627 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 QSER1Q2KHR3 1735 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 QRICH2Q9H0J4 1663 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 CCDC196A0A1B0GTZ2 297 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 TMPOP42166 694 aaKnown RBP7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 RIPK4P57078 832 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 FAM184AQ8NB25 1140 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 AKAP12Q02952 1782 aa7.76□□□□□ -1.17
TM9SF4-202ENST00000398022 HTATSF1O43719 755 aaKnown RBP7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 TGFB3P10600 412 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 TRIM27P14373 513 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 ABL2P42684 1182 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 RASA3Q14644 834 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 ZNF394Q53GI3 561 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 DNAJC21Q5F1R6 531 aaKnown RBP7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 ZNF772Q68DY9 489 aaPredicted RBP7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 CATIPQ7Z7H3 387 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 TSR2Q969E8 191 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms