RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 EXOC6Q8TAG9 804 aa16.76■□□□□ 0.27
SEC13-209ENST00000397117 WBP1LQ9NX94 342 aa16.76■□□□□ 0.27
SEC13-209ENST00000397117 CLEC11AQ9Y240 323 aa16.76■□□□□ 0.27
SEC13-209ENST00000397117 CRY2Q49AN0 593 aa16.75■□□□□ 0.27
SEC13-209ENST00000397117 CNTROBQ8N137 903 aa16.75■□□□□ 0.27
SEC13-209ENST00000397117 GPC2Q8N158 579 aa16.75■□□□□ 0.27
SEC13-209ENST00000397117 PSMD1Q99460 953 aa16.75■□□□□ 0.27
SEC13-209ENST00000397117 LAMB4A4D0S4 1761 aa16.75■□□□□ 0.27
SEC13-209ENST00000397117 FLIIQ13045 1269 aa16.74■□□□□ 0.27
SEC13-209ENST00000397117 TNNQ9UQP3 1299 aa16.74■□□□□ 0.27
SEC13-209ENST00000397117 COG6Q9Y2V7 657 aa16.74■□□□□ 0.27
SEC13-209ENST00000397117 RASSF10A6NK89 507 aa16.74■□□□□ 0.27
SEC13-209ENST00000397117 RLBP1P12271 317 aa16.74■□□□□ 0.27
SEC13-209ENST00000397117 MAP1SQ66K74 1059 aaPredicted RBP16.74■□□□□ 0.27
SEC13-209ENST00000397117 G2E3Q7L622 706 aa16.74■□□□□ 0.27
SEC13-209ENST00000397117 AIDAQ96BJ3 306 aa16.74■□□□□ 0.27
SEC13-209ENST00000397117 HYPKQ9NX55 129 aa16.74■□□□□ 0.27
SEC13-209ENST00000397117 ERVV-1B6SEH8 477 aa16.73■□□□□ 0.27
SEC13-209ENST00000397117 GTF2E1P29083 439 aaPredicted RBP16.73■□□□□ 0.27
SEC13-209ENST00000397117 FKBP5Q13451 457 aaPredicted RBP16.73■□□□□ 0.27
SEC13-209ENST00000397117 DEFB115Q30KQ5 88 aa16.73■□□□□ 0.27
SEC13-209ENST00000397117 DDX21Q9NR30 783 aaKnown RBP eCLIP16.73■□□□□ 0.273e-7■■■□□ 17.1
SEC13-209ENST00000397117 COL4A5P29400 1685 aa16.72■□□□□ 0.27
SEC13-209ENST00000397117 HOXA10P31260 410 aaPredicted RBP16.72■□□□□ 0.27
SEC13-209ENST00000397117 CC2D2BQ6DHV5 1058 aa16.72■□□□□ 0.27
SEC13-209ENST00000397117 ITPRIPQ8IWB1 547 aa16.72■□□□□ 0.27
SEC13-209ENST00000397117 NYXQ9GZU5 481 aa16.72■□□□□ 0.27
SEC13-209ENST00000397117 PPP4R2Q9NY27 417 aa16.72■□□□□ 0.27
SEC13-209ENST00000397117 ABCC12Q96J65 1359 aa16.72■□□□□ 0.27
SEC13-209ENST00000397117 LTBP1Q14766 1721 aa16.71■□□□□ 0.27
SEC13-209ENST00000397117 MVPQ14764 893 aaKnown RBP16.71■□□□□ 0.27
SEC13-209ENST00000397117 NUTM1Q86Y26 1132 aa16.71■□□□□ 0.27
SEC13-209ENST00000397117 JDP2Q8WYK2 163 aa16.71■□□□□ 0.27
SEC13-209ENST00000397117 ERBB4Q15303 1308 aa16.71■□□□□ 0.27
SEC13-209ENST00000397117 CACNA1FO60840 1977 aa16.71■□□□□ 0.26
SEC13-209ENST00000397117 ANXA1P04083 346 aa16.7■□□□□ 0.26
SEC13-209ENST00000397117 LBX1P52954 281 aa16.7■□□□□ 0.26
SEC13-209ENST00000397117 TMEM57Q8N5G2 664 aa16.7■□□□□ 0.26
SEC13-209ENST00000397117 PHAXQ9H814 394 aaKnown RBP16.7■□□□□ 0.26
SEC13-209ENST00000397117 RIC1Q4ADV7 1423 aa16.7■□□□□ 0.26
SEC13-209ENST00000397117 ABCC4O15439 1325 aa16.7■□□□□ 0.26
SEC13-209ENST00000397117 MAP3K15Q6ZN16 1313 aa16.7■□□□□ 0.26
SEC13-209ENST00000397117 MYL6BP14649 208 aa16.7■□□□□ 0.26
SEC13-209ENST00000397117 PROSER3Q2NL68 480 aa16.7■□□□□ 0.26
SEC13-209ENST00000397117 TTLL7Q6ZT98 887 aa16.7■□□□□ 0.26
SEC13-209ENST00000397117 DDX19BQ9UMR2 479 aa16.7■□□□□ 0.26
SEC13-209ENST00000397117 WDR33Q9C0J8 1336 aaKnown RBP16.69■□□□□ 0.26
SEC13-209ENST00000397117 TRPM7Q96QT4 1865 aa16.69■□□□□ 0.26
SEC13-209ENST00000397117 HSPA8P11142 646 aaKnown RBP16.69■□□□□ 0.26
SEC13-209ENST00000397117 EIF6P56537 245 aaKnown RBP16.69■□□□□ 0.26
SEC13-209ENST00000397117 PDIA6Q15084 440 aa16.69■□□□□ 0.26
SEC13-209ENST00000397117 GRIPAP1Q4V328 841 aa16.69■□□□□ 0.26
SEC13-209ENST00000397117 IBTKQ9P2D0 1353 aaPredicted RBP16.68■□□□□ 0.26
SEC13-209ENST00000397117 DDX58O95786 925 aaKnown RBP16.68■□□□□ 0.26
SEC13-209ENST00000397117 CRAMP1Q96RY5 1269 aa16.68■□□□□ 0.26
SEC13-209ENST00000397117 CHMP4BQ9H444 224 aaKnown RBP16.68■□□□□ 0.26
SEC13-209ENST00000397117 GJA3Q9Y6H8 435 aa16.68■□□□□ 0.26
SEC13-209ENST00000397117 UBN2Q6ZU65 1347 aa16.68■□□□□ 0.26
SEC13-209ENST00000397117 F6X3S4 739 aa16.67■□□□□ 0.26
SEC13-209ENST00000397117 EPS15P42566 896 aa16.67■□□□□ 0.26
SEC13-209ENST00000397117 SCNN1DP51172 638 aa16.67■□□□□ 0.26
SEC13-209ENST00000397117 MAP2K1Q02750 393 aaPredicted RBP16.67■□□□□ 0.26
SEC13-209ENST00000397117 AAMPQ13685 434 aa16.67■□□□□ 0.26
SEC13-209ENST00000397117 SUSD4Q5VX71 490 aa16.67■□□□□ 0.26
SEC13-209ENST00000397117 SLC4A10Q6U841 1118 aa16.67■□□□□ 0.26
SEC13-209ENST00000397117 ZNF34Q8IZ26 560 aa16.67■□□□□ 0.26
SEC13-209ENST00000397117 RPGRQ92834 1020 aaKnown RBP16.67■□□□□ 0.26
SEC13-209ENST00000397117 GPTP24298 496 aa16.67■□□□□ 0.26
SEC13-209ENST00000397117 AIMP1Q12904 312 aaKnown RBP16.67■□□□□ 0.26
SEC13-209ENST00000397117 SLC51AQ86UW1 340 aa16.67■□□□□ 0.26
SEC13-209ENST00000397117 ABT1Q9ULW3 272 aaKnown RBP16.67■□□□□ 0.26
SEC13-209ENST00000397117 LMOD1P29536 600 aaPredicted RBP16.66■□□□□ 0.26
SEC13-209ENST00000397117 CCT4P50991 539 aaKnown RBP16.66■□□□□ 0.26
SEC13-209ENST00000397117 FMR1Q06787 632 aaKnown RBP eCLIP16.66■□□□□ 0.26
SEC13-209ENST00000397117 INTS3Q68E01 1043 aaKnown RBP16.66■□□□□ 0.26
SEC13-209ENST00000397117 KIF6Q6ZMV9 814 aa16.66■□□□□ 0.26
SEC13-209ENST00000397117 LARGE2Q8N3Y3 721 aa16.66■□□□□ 0.26
SEC13-209ENST00000397117 RBM17Q96I25 401 aaKnown RBP16.66■□□□□ 0.26
SEC13-209ENST00000397117 CCDC136Q96JN2 1154 aa16.66■□□□□ 0.26
SEC13-209ENST00000397117 PI4KAP2A4QPH2 592 aa16.65■□□□□ 0.26
SEC13-209ENST00000397117 NTSR2O95665 410 aa16.65■□□□□ 0.26
SEC13-209ENST00000397117 C3orf67Q6ZVT6 689 aa16.65■□□□□ 0.26
SEC13-209ENST00000397117 PI4KAP1Q8N8J0 262 aa16.65■□□□□ 0.26
SEC13-209ENST00000397117 XAGE3Q8WTP9 111 aa16.65■□□□□ 0.26
SEC13-209ENST00000397117 ZBTB3Q9H5J0 574 aa16.65■□□□□ 0.26
SEC13-209ENST00000397117 THSD7BQ9C0I4 1608 aa16.65■□□□□ 0.26
SEC13-209ENST00000397117 PPEF1O14829 653 aaPredicted RBP16.64■□□□□ 0.25
SEC13-209ENST00000397117 CST9Q5W186 159 aa16.64■□□□□ 0.25
SEC13-209ENST00000397117 KSR2Q6VAB6 950 aa16.64■□□□□ 0.25
SEC13-209ENST00000397117 GIGYF2Q6Y7W6 1299 aaKnown RBP16.64■□□□□ 0.25
SEC13-209ENST00000397117 USP50Q70EL3 339 aaPredicted RBP16.64■□□□□ 0.25
SEC13-209ENST00000397117 COPS6Q7L5N1 327 aa16.64■□□□□ 0.25
SEC13-209ENST00000397117 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
SEC13-209ENST00000397117 DNAAF4Q8WXU2 420 aa16.63■□□□□ 0.25
SEC13-209ENST00000397117 ABHD8Q96I13 439 aa16.63■□□□□ 0.25
SEC13-209ENST00000397117 SLC10A5Q5PT55 438 aa16.63■□□□□ 0.25
SEC13-209ENST00000397117 B4GALNT3Q6L9W6 998 aa16.63■□□□□ 0.25
SEC13-209ENST00000397117 LRP10Q7Z4F1 713 aa16.63■□□□□ 0.25
SEC13-209ENST00000397117 CAPNS2Q96L46 248 aa16.63■□□□□ 0.25
SEC13-209ENST00000397117 VPS33BQ9H267 617 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms