RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 CTSWP56202 376 aa13.44□□□□□ -0.26
NUP98-205ENST00000397007 NUTM1Q86Y26 1132 aa13.44□□□□□ -0.26
NUP98-205ENST00000397007 FAM89AQ96GI7 184 aa13.44□□□□□ -0.26
NUP98-205ENST00000397007 PLIN1O60240 522 aa13.44□□□□□ -0.26
NUP98-205ENST00000397007 PDE8AO60658 829 aa13.44□□□□□ -0.26
NUP98-205ENST00000397007 PANK1Q8TE04 598 aa13.44□□□□□ -0.26
NUP98-205ENST00000397007 VGLL2Q8N8G2 317 aa13.43□□□□□ -0.26
NUP98-205ENST00000397007 SYT17Q9BSW7 474 aa13.43□□□□□ -0.26
NUP98-205ENST00000397007 FHDC1Q9C0D6 1143 aaPredicted RBP13.43□□□□□ -0.26
NUP98-205ENST00000397007 WDR90Q96KV7 1748 aa13.43□□□□□ -0.26
NUP98-205ENST00000397007 NBPF5PQ86XG9 351 aaPredicted RBP13.43□□□□□ -0.26
NUP98-205ENST00000397007 FOCADQ5VW36 1801 aa13.42□□□□□ -0.26
NUP98-205ENST00000397007 IRS4O14654 1257 aaPredicted RBP13.42□□□□□ -0.26
NUP98-205ENST00000397007 SLC51AQ86UW1 340 aa13.42□□□□□ -0.26
NUP98-205ENST00000397007 RTFDC1Q9BY42 306 aaPredicted RBP13.42□□□□□ -0.26
NUP98-205ENST00000397007 LTBP3Q9NS15 1303 aa13.42□□□□□ -0.26
NUP98-205ENST00000397007 NEXNQ0ZGT2 675 aa13.42□□□□□ -0.26
NUP98-205ENST00000397007 MYO5AQ9Y4I1 1855 aaKnown RBP13.41□□□□□ -0.26
NUP98-205ENST00000397007 PDE6BP35913 854 aa13.41□□□□□ -0.26
NUP98-205ENST00000397007 SSH3Q8TE77 659 aa13.41□□□□□ -0.26
NUP98-205ENST00000397007 POLD1P28340 1107 aa13.41□□□□□ -0.26
NUP98-205ENST00000397007 BICC1Q9H694 974 aaKnown RBP13.41□□□□□ -0.26
NUP98-205ENST00000397007 TRMT112Q9UI30 125 aaKnown RBP13.41□□□□□ -0.26
NUP98-205ENST00000397007 NPR1P16066 1061 aa13.41□□□□□ -0.26
NUP98-205ENST00000397007 PRELPP51888 382 aa13.41□□□□□ -0.26
NUP98-205ENST00000397007 AAMPQ13685 434 aa13.41□□□□□ -0.26
NUP98-205ENST00000397007 UBE3BQ7Z3V4 1068 aa13.41□□□□□ -0.26
NUP98-205ENST00000397007 LAMB1P07942 1786 aa13.41□□□□□ -0.26
NUP98-205ENST00000397007 CDK5RAP2Q96SN8 1893 aa13.4□□□□□ -0.26
NUP98-205ENST00000397007 MS4A1P11836 297 aa13.4□□□□□ -0.26
NUP98-205ENST00000397007 DPEP1P16444 411 aa13.4□□□□□ -0.26
NUP98-205ENST00000397007 ST5P78524 1137 aa13.4□□□□□ -0.26
NUP98-205ENST00000397007 MASTLQ96GX5 879 aa13.4□□□□□ -0.26
NUP98-205ENST00000397007 PODXL2Q9NZ53 605 aa13.4□□□□□ -0.26
NUP98-205ENST00000397007 NOP58Q9Y2X3 529 aaKnown RBP13.4□□□□□ -0.26
NUP98-205ENST00000397007 MYH7P12883 1935 aa13.4□□□□□ -0.26
NUP98-205ENST00000397007 CEP85Q6P2H3 762 aa13.4□□□□□ -0.27
NUP98-205ENST00000397007 GREM2Q9H772 168 aa13.39□□□□□ -0.27
NUP98-205ENST00000397007 ZNF330Q9Y3S2 320 aaPredicted RBP13.39□□□□□ -0.27
NUP98-205ENST00000397007 HCLS1P14317 486 aaPredicted RBP13.39□□□□□ -0.27
NUP98-205ENST00000397007 PTPN12Q05209 780 aaKnown RBP13.39□□□□□ -0.27
NUP98-205ENST00000397007 DDX19BQ9UMR2 479 aa13.39□□□□□ -0.27
NUP98-205ENST00000397007 BICDL1Q6ZP65 573 aa13.38□□□□□ -0.27
NUP98-205ENST00000397007 ATG9AQ7Z3C6 839 aa13.38□□□□□ -0.27
NUP98-205ENST00000397007 COPRSQ9NQ92 184 aa13.38□□□□□ -0.27
NUP98-205ENST00000397007 PAPPA2Q9BXP8 1791 aa13.38□□□□□ -0.27
NUP98-205ENST00000397007 YBX3P16989 372 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■■■□□ 15.7
NUP98-205ENST00000397007 GRAPQ13588 217 aa13.38□□□□□ -0.27
NUP98-205ENST00000397007 GRAPLQ8TC17 118 aaPredicted RBP13.38□□□□□ -0.27
NUP98-205ENST00000397007 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
NUP98-205ENST00000397007 CHRNA5P30532 468 aa13.38□□□□□ -0.27
NUP98-205ENST00000397007 C15orf52Q6ZUT6 534 aaKnown RBP13.38□□□□□ -0.27
NUP98-205ENST00000397007 RIPOR2Q9Y4F9 1068 aa13.38□□□□□ -0.27
NUP98-205ENST00000397007 DDX60LQ5H9U9 1706 aaKnown RBP13.37□□□□□ -0.27
NUP98-205ENST00000397007 GNAI3P08754 354 aa13.37□□□□□ -0.27
NUP98-205ENST00000397007 ATP8B2P98198 1209 aa13.37□□□□□ -0.27
NUP98-205ENST00000397007 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.37□□□□□ -0.27
NUP98-205ENST00000397007 PNMA6EA0A0J9YXQ4 647 aa13.37□□□□□ -0.27
NUP98-205ENST00000397007 CIAO1O76071 339 aa13.37□□□□□ -0.27
NUP98-205ENST00000397007 FRAT1Q92837 279 aaPredicted RBP13.37□□□□□ -0.27
NUP98-205ENST00000397007 CELF1Q92879 486 aaKnown RBP13.37□□□□□ -0.27
NUP98-205ENST00000397007 LRRFIP2Q9Y608 721 aaKnown RBP13.37□□□□□ -0.27
NUP98-205ENST00000397007 SCN4AP35499 1836 aa13.37□□□□□ -0.27
NUP98-205ENST00000397007 JARID2Q92833 1246 aaPredicted RBP13.36□□□□□ -0.27
NUP98-205ENST00000397007 BSDC1Q9NW68 430 aaPredicted RBP13.36□□□□□ -0.27
NUP98-205ENST00000397007 SUPT16HQ9Y5B9 1047 aaKnown RBP13.36□□□□□ -0.27
NUP98-205ENST00000397007 FAM161AQ3B820 660 aa13.36□□□□□ -0.27
NUP98-205ENST00000397007 TMC4Q7Z404 712 aa13.36□□□□□ -0.27
NUP98-205ENST00000397007 CCDC24Q8N4L8 307 aa13.36□□□□□ -0.27
NUP98-205ENST00000397007 SEC31BQ9NQW1 1179 aa13.36□□□□□ -0.27
NUP98-205ENST00000397007 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
NUP98-205ENST00000397007 ATP6V0A2Q9Y487 856 aa13.36□□□□□ -0.27
NUP98-205ENST00000397007 PCDHB15Q9Y5E8 787 aa13.36□□□□□ -0.27
NUP98-205ENST00000397007 FGFR2P21802 821 aa13.35□□□□□ -0.27
NUP98-205ENST00000397007 CLUAP1Q96AJ1 413 aa13.35□□□□□ -0.27
NUP98-205ENST00000397007 CRBNQ96SW2 442 aa13.35□□□□□ -0.27
NUP98-205ENST00000397007 A0A0G2JLW4 131 aa13.35□□□□□ -0.27
NUP98-205ENST00000397007 SLC4A10Q6U841 1118 aa13.35□□□□□ -0.27
NUP98-205ENST00000397007 C2CD5Q86YS7 1000 aa13.35□□□□□ -0.27
NUP98-205ENST00000397007 SP8Q8IXZ3 490 aa13.35□□□□□ -0.27
NUP98-205ENST00000397007 NLRP3Q96P20 1036 aa13.35□□□□□ -0.27
NUP98-205ENST00000397007 HSP90B1P14625 803 aaKnown RBP13.35□□□□□ -0.27
NUP98-205ENST00000397007 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.35□□□□□ -0.27
NUP98-205ENST00000397007 PRPF40BQ6NWY9 871 aaKnown RBP13.34□□□□□ -0.27
NUP98-205ENST00000397007 KDM2BQ8NHM5 1336 aa13.34□□□□□ -0.27
NUP98-205ENST00000397007 SALL3Q9BXA9 1300 aa13.34□□□□□ -0.27
NUP98-205ENST00000397007 MSH5O43196 834 aa13.34□□□□□ -0.27
NUP98-205ENST00000397007 GNAI2P04899 355 aa13.34□□□□□ -0.27
NUP98-205ENST00000397007 HDAC1Q13547 482 aaPredicted RBP13.34□□□□□ -0.27
NUP98-205ENST00000397007 COL1A1P02452 1464 aaPredicted RBP13.34□□□□□ -0.27
NUP98-205ENST00000397007 NFKBIEO00221 500 aa13.34□□□□□ -0.27
NUP98-205ENST00000397007 BBOX1O75936 387 aa13.34□□□□□ -0.27
NUP98-205ENST00000397007 CCDC152Q4G0S7 254 aa13.34□□□□□ -0.27
NUP98-205ENST00000397007 PSMD1Q99460 953 aa13.34□□□□□ -0.27
NUP98-205ENST00000397007 ITGA6P23229 1130 aa13.33□□□□□ -0.28
NUP98-205ENST00000397007 LMBR1LQ6UX01 489 aa13.33□□□□□ -0.28
NUP98-205ENST00000397007 RBM17Q96I25 401 aaKnown RBP13.33□□□□□ -0.28
NUP98-205ENST00000397007 UBTFL1P0CB47 393 aaPredicted RBP13.33□□□□□ -0.28
NUP98-205ENST00000397007 GRIPAP1Q4V328 841 aa13.33□□□□□ -0.28
NUP98-205ENST00000397007 VPS33BQ9H267 617 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1127.1 ms