RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 CNTNAP1P78357 1384 aa22.19■■□□□ 1.14
TNFSF13-205ENST00000396545 ZNF853P0CG23 659 aa22.19■■□□□ 1.14
TNFSF13-205ENST00000396545 EIF6P56537 245 aaKnown RBP22.19■■□□□ 1.14
TNFSF13-205ENST00000396545 HSP90AB3PQ58FF7 597 aa22.19■■□□□ 1.14
TNFSF13-205ENST00000396545 NLRP10Q86W26 655 aa22.19■■□□□ 1.14
TNFSF13-205ENST00000396545 LARGE2Q8N3Y3 721 aa22.19■■□□□ 1.14
TNFSF13-205ENST00000396545 DDX21Q9NR30 783 aaKnown RBP eCLIP22.19■■□□□ 1.14
TNFSF13-205ENST00000396545 TCERG1O14776 1098 aaKnown RBP22.18■■□□□ 1.14
TNFSF13-205ENST00000396545 ZNF428Q96B54 188 aa22.18■■□□□ 1.14
TNFSF13-205ENST00000396545 ATP6V0A2Q9Y487 856 aa22.18■■□□□ 1.14
TNFSF13-205ENST00000396545 LTBP1Q14766 1721 aa22.18■■□□□ 1.14
TNFSF13-205ENST00000396545 ABCC4O15439 1325 aa22.18■■□□□ 1.14
TNFSF13-205ENST00000396545 RARSP54136 660 aaKnown RBP22.17■■□□□ 1.14
TNFSF13-205ENST00000396545 AIMP1Q12904 312 aaKnown RBP22.17■■□□□ 1.14
TNFSF13-205ENST00000396545 CLEC11AQ9Y240 323 aa22.17■■□□□ 1.14
TNFSF13-205ENST00000396545 GJA3Q9Y6H8 435 aa22.17■■□□□ 1.14
TNFSF13-205ENST00000396545 LAMB2P55268 1798 aa22.17■■□□□ 1.14
TNFSF13-205ENST00000396545 TMEM88BA6NKF7 163 aa22.16■■□□□ 1.14
TNFSF13-205ENST00000396545 TCIRG1Q13488 830 aa22.16■■□□□ 1.14
TNFSF13-205ENST00000396545 MAP1SQ66K74 1059 aaPredicted RBP22.16■■□□□ 1.14
TNFSF13-205ENST00000396545 CHPF2Q9P2E5 772 aa22.16■■□□□ 1.14
TNFSF13-205ENST00000396545 HOXB7P09629 217 aa22.15■■□□□ 1.14
TNFSF13-205ENST00000396545 HCLS1P14317 486 aaPredicted RBP22.15■■□□□ 1.14
TNFSF13-205ENST00000396545 SCNN1DP51172 638 aa22.15■■□□□ 1.14
TNFSF13-205ENST00000396545 PDE3AQ14432 1141 aa22.15■■□□□ 1.14
TNFSF13-205ENST00000396545 CNTROBQ8N137 903 aa22.15■■□□□ 1.14
TNFSF13-205ENST00000396545 PPIP5K2O43314 1243 aa22.14■■□□□ 1.13
TNFSF13-205ENST00000396545 NIM1KQ8IY84 436 aa22.14■■□□□ 1.13
TNFSF13-205ENST00000396545 TNS4Q8IZW8 715 aa22.14■■□□□ 1.13
TNFSF13-205ENST00000396545 RTFDC1Q9BY42 306 aaPredicted RBP22.14■■□□□ 1.13
TNFSF13-205ENST00000396545 TMX4Q9H1E5 349 aaPredicted RBP22.14■■□□□ 1.13
TNFSF13-205ENST00000396545 VPS33BQ9H267 617 aa22.14■■□□□ 1.13
TNFSF13-205ENST00000396545 TRMT112Q9UI30 125 aaKnown RBP22.14■■□□□ 1.13
TNFSF13-205ENST00000396545 LAS1LQ9Y4W2 734 aaKnown RBP22.14■■□□□ 1.13
TNFSF13-205ENST00000396545 LMOD1P29536 600 aaPredicted RBP22.13■■□□□ 1.13
TNFSF13-205ENST00000396545 AOC3Q16853 763 aa22.13■■□□□ 1.13
TNFSF13-205ENST00000396545 HDGFL1Q5TGJ6 251 aa22.13■■□□□ 1.13
TNFSF13-205ENST00000396545 TSR2Q969E8 191 aaKnown RBP22.13■■□□□ 1.13
TNFSF13-205ENST00000396545 SH3TC1Q8TE82 1336 aa22.13■■□□□ 1.13
TNFSF13-205ENST00000396545 BBOX1O75936 387 aa22.12■■□□□ 1.13
TNFSF13-205ENST00000396545 EPS15P42566 896 aa22.12■■□□□ 1.13
TNFSF13-205ENST00000396545 EXOSC9Q06265 439 aaKnown RBP22.12■■□□□ 1.13
TNFSF13-205ENST00000396545 VEGFBP49765 207 aa22.11■■□□□ 1.13
TNFSF13-205ENST00000396545 SP8Q8IXZ3 490 aa22.11■■□□□ 1.13
TNFSF13-205ENST00000396545 SUPT20HQ8NEM7 779 aa22.11■■□□□ 1.13
TNFSF13-205ENST00000396545 PLBD2Q8NHP8 589 aa22.11■■□□□ 1.13
TNFSF13-205ENST00000396545 DDX46Q7L014 1031 aaKnown RBP22.1■■□□□ 1.13
TNFSF13-205ENST00000396545 MBIPQ9NS73 344 aa22.1■■□□□ 1.13
TNFSF13-205ENST00000396545 DBF4Q9UBU7 674 aaPredicted RBP22.1■■□□□ 1.13
TNFSF13-205ENST00000396545 GRAPQ13588 217 aa22.09■■□□□ 1.13
TNFSF13-205ENST00000396545 DPP8Q6V1X1 898 aaPredicted RBP22.09■■□□□ 1.13
TNFSF13-205ENST00000396545 GRAPLQ8TC17 118 aaPredicted RBP22.09■■□□□ 1.13
TNFSF13-205ENST00000396545 ZNRF3Q9ULT6 936 aa22.09■■□□□ 1.13
TNFSF13-205ENST00000396545 DDX60Q8IY21 1712 aaKnown RBP22.09■■□□□ 1.13
TNFSF13-205ENST00000396545 RASSF10A6NK89 507 aa22.08■■□□□ 1.13
TNFSF13-205ENST00000396545 ANKRD13DQ6ZTN6 518 aa22.08■■□□□ 1.13
TNFSF13-205ENST00000396545 USP50Q70EL3 339 aaPredicted RBP22.08■■□□□ 1.13
TNFSF13-205ENST00000396545 MPNDQ8N594 471 aa22.08■■□□□ 1.13
TNFSF13-205ENST00000396545 ISCA1Q9BUE6 129 aa22.08■■□□□ 1.13
TNFSF13-205ENST00000396545 LRRC37AA6NMS7 1700 aa22.08■■□□□ 1.13
TNFSF13-205ENST00000396545 CXCL9Q07325 125 aa22.08■■□□□ 1.12
TNFSF13-205ENST00000396545 ALDH1L2Q3SY69 923 aa22.08■■□□□ 1.12
TNFSF13-205ENST00000396545 DUOX1Q9NRD9 1551 aa22.07■■□□□ 1.12
TNFSF13-205ENST00000396545 TAF1P21675 1872 aa22.07■■□□□ 1.12
TNFSF13-205ENST00000396545 KIAA2012Q0VF49 1180 aa22.07■■□□□ 1.12
TNFSF13-205ENST00000396545 HYPKQ9NX55 129 aa22.07■■□□□ 1.12
TNFSF13-205ENST00000396545 GPRC5DQ9NZD1 345 aa22.07■■□□□ 1.12
TNFSF13-205ENST00000396545 FOXN1O15353 648 aa22.06■■□□□ 1.12
TNFSF13-205ENST00000396545 TMC4Q7Z404 712 aa22.06■■□□□ 1.12
TNFSF13-205ENST00000396545 ATP5J2-PTCD1G3V325 749 aa22.04■■□□□ 1.12
TNFSF13-205ENST00000396545 BRPF1P55201 1214 aaPredicted RBP22.04■■□□□ 1.12
TNFSF13-205ENST00000396545 DEFB115Q30KQ5 88 aa22.04■■□□□ 1.12
TNFSF13-205ENST00000396545 FAM89AQ96GI7 184 aa22.04■■□□□ 1.12
TNFSF13-205ENST00000396545 ADARB2Q9NS39 739 aaKnown RBP22.04■■□□□ 1.12
TNFSF13-205ENST00000396545 RBM19Q9Y4C8 960 aaKnown RBP22.04■■□□□ 1.12
TNFSF13-205ENST00000396545 TRIM28Q13263 835 aaKnown RBP22.04■■□□□ 1.12
TNFSF13-205ENST00000396545 SF3B3Q15393 1217 aaKnown RBP22.04■■□□□ 1.12
TNFSF13-205ENST00000396545 CDHR2Q9BYE9 1310 aa22.03■■□□□ 1.12
TNFSF13-205ENST00000396545 CAPN15O75808 1086 aa22.03■■□□□ 1.12
TNFSF13-205ENST00000396545 MS4A1P11836 297 aa22.03■■□□□ 1.12
TNFSF13-205ENST00000396545 GMPSP49915 693 aaPredicted RBP22.03■■□□□ 1.12
TNFSF13-205ENST00000396545 FMR1Q06787 632 aaKnown RBP eCLIP22.03■■□□□ 1.12
TNFSF13-205ENST00000396545 CIAPIN1Q6FI81 312 aa22.03■■□□□ 1.12
TNFSF13-205ENST00000396545 WBP1LQ9NX94 342 aa22.03■■□□□ 1.12
TNFSF13-205ENST00000396545 ABT1Q9ULW3 272 aaKnown RBP22.03■■□□□ 1.12
TNFSF13-205ENST00000396545 VAMP4O75379 141 aa22.02■■□□□ 1.12
TNFSF13-205ENST00000396545 TRAF5O00463 557 aa22.01■■□□□ 1.11
TNFSF13-205ENST00000396545 TWISTNBQ3B726 338 aaPredicted RBP22.01■■□□□ 1.11
TNFSF13-205ENST00000396545 CELF1Q92879 486 aaKnown RBP22.01■■□□□ 1.11
TNFSF13-205ENST00000396545 AIDAQ96BJ3 306 aa22.01■■□□□ 1.11
TNFSF13-205ENST00000396545 COL4A1P02462 1669 aa22.01■■□□□ 1.11
TNFSF13-205ENST00000396545 YDJCA8MPS7 323 aa22■■□□□ 1.11
TNFSF13-205ENST00000396545 RAD17O75943 681 aa22■■□□□ 1.11
TNFSF13-205ENST00000396545 AAMPQ13685 434 aa22■■□□□ 1.11
TNFSF13-205ENST00000396545 FRAT1Q92837 279 aaPredicted RBP22■■□□□ 1.11
TNFSF13-205ENST00000396545 PRDM10Q9NQV6 1147 aa22■■□□□ 1.11
TNFSF13-205ENST00000396545 TRPM7Q96QT4 1865 aa22■■□□□ 1.11
TNFSF13-205ENST00000396545 KIF16BQ96L93 1317 aa22■■□□□ 1.11
TNFSF13-205ENST00000396545 WDR33Q9C0J8 1336 aaKnown RBP22■■□□□ 1.11
TNFSF13-205ENST00000396545 CTCFP49711 727 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms