RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 A0A0D9SFI3 127 aa18.02■□□□□ 0.48
CBX3-202ENST00000396386 TRAK2O60296 914 aa18.02■□□□□ 0.48
CBX3-202ENST00000396386 CCDC57Q2TAC2 916 aa18.01■□□□□ 0.47
CBX3-202ENST00000396386 BARGINQ6ZT62 677 aa18.01■□□□□ 0.47
CBX3-202ENST00000396386 NOL8Q76FK4 1167 aaKnown RBP18.01■□□□□ 0.47
CBX3-202ENST00000396386 RASEFQ8IZ41 740 aa18.01■□□□□ 0.47
CBX3-202ENST00000396386 KCNB2Q92953 911 aa18.01■□□□□ 0.47
CBX3-202ENST00000396386 INTS4Q96HW7 963 aaKnown RBP18.01■□□□□ 0.47
CBX3-202ENST00000396386 HAUS7Q99871 368 aa18.01■□□□□ 0.47
CBX3-202ENST00000396386 FBXO3Q9UK99 471 aa18.01■□□□□ 0.47
CBX3-202ENST00000396386 COL5A3P25940 1745 aaPredicted RBP18.01■□□□□ 0.47
CBX3-202ENST00000396386 IL6STP40189 918 aaPredicted RBP18.01■□□□□ 0.47
CBX3-202ENST00000396386 NLRP10Q86W26 655 aa18.01■□□□□ 0.47
CBX3-202ENST00000396386 ZNF594Q96JF6 807 aaPredicted RBP18.01■□□□□ 0.47
CBX3-202ENST00000396386 ZNF831Q5JPB2 1677 aa18■□□□□ 0.47
CBX3-202ENST00000396386 GOLGA6L22H0YM25 854 aa18■□□□□ 0.47
CBX3-202ENST00000396386 HLFQ16534 295 aa18■□□□□ 0.47
CBX3-202ENST00000396386 LRRC24Q50LG9 513 aa18■□□□□ 0.47
CBX3-202ENST00000396386 PRPF40BQ6NWY9 871 aaKnown RBP18■□□□□ 0.47
CBX3-202ENST00000396386 FAM89AQ96GI7 184 aa18■□□□□ 0.47
CBX3-202ENST00000396386 DNAJC2Q99543 621 aaKnown RBP18■□□□□ 0.47
CBX3-202ENST00000396386 RGS17Q9UGC6 210 aaPredicted RBP18■□□□□ 0.47
CBX3-202ENST00000396386 CCDC9Q9Y3X0 531 aaKnown RBP18■□□□□ 0.47
CBX3-202ENST00000396386 RBM8AQ9Y5S9 174 aaKnown RBP18■□□□□ 0.47
CBX3-202ENST00000396386 PALLDQ8WX93 1383 aa18■□□□□ 0.47
CBX3-202ENST00000396386 ERVV-1B6SEH8 477 aa17.99■□□□□ 0.47
CBX3-202ENST00000396386 KCNJ4P48050 445 aa17.99■□□□□ 0.47
CBX3-202ENST00000396386 MARCH10Q8NA82 808 aaPredicted RBP17.99■□□□□ 0.47
CBX3-202ENST00000396386 EDC3Q96F86 508 aaKnown RBP17.99■□□□□ 0.47
CBX3-202ENST00000396386 TTC14Q96N46 770 aa17.99■□□□□ 0.47
CBX3-202ENST00000396386 LRP5O75197 1615 aa17.99■□□□□ 0.47
CBX3-202ENST00000396386 LAMB2P55268 1798 aa17.99■□□□□ 0.47
CBX3-202ENST00000396386 A0A0G2JS52 829 aa17.99■□□□□ 0.47
CBX3-202ENST00000396386 BAG4O95429 457 aaKnown RBP17.99■□□□□ 0.47
CBX3-202ENST00000396386 ZKSCAN1P17029 563 aaPredicted RBP17.99■□□□□ 0.47
CBX3-202ENST00000396386 GPTP24298 496 aa17.99■□□□□ 0.47
CBX3-202ENST00000396386 DZIP3Q86Y13 1208 aaKnown RBP17.99■□□□□ 0.47
CBX3-202ENST00000396386 MAP4K1Q92918 833 aa17.99■□□□□ 0.47
CBX3-202ENST00000396386 NEUROD6Q96NK8 337 aa17.99■□□□□ 0.47
CBX3-202ENST00000396386 TM6SF1Q9BZW5 370 aa17.99■□□□□ 0.47
CBX3-202ENST00000396386 BCORQ6W2J9 1755 aa17.98■□□□□ 0.47
CBX3-202ENST00000396386 CSF1RP07333 972 aa17.98■□□□□ 0.47
CBX3-202ENST00000396386 CASTP20810 708 aaKnown RBP17.98■□□□□ 0.47
CBX3-202ENST00000396386 NECTIN1Q15223 517 aa17.98■□□□□ 0.47
CBX3-202ENST00000396386 RIC1Q4ADV7 1423 aa17.97■□□□□ 0.47
CBX3-202ENST00000396386 SKOR2Q2VWA4 1001 aaPredicted RBP17.97■□□□□ 0.47
CBX3-202ENST00000396386 TAF7LQ5H9L4 462 aa17.97■□□□□ 0.47
CBX3-202ENST00000396386 ACSBG1Q96GR2 724 aa17.97■□□□□ 0.47
CBX3-202ENST00000396386 CEP126Q9P2H0 1117 aa17.97■□□□□ 0.47
CBX3-202ENST00000396386 IFIT5Q13325 482 aaKnown RBP17.97■□□□□ 0.47
CBX3-202ENST00000396386 PKP1Q13835 747 aa17.97■□□□□ 0.47
CBX3-202ENST00000396386 CREB3L3Q68CJ9 461 aa17.97■□□□□ 0.47
CBX3-202ENST00000396386 KBTBD3Q8NAB2 608 aa17.97■□□□□ 0.47
CBX3-202ENST00000396386 JAKMIP1Q96N16 626 aaKnown RBP17.97■□□□□ 0.47
CBX3-202ENST00000396386 PUS3Q9BZE2 481 aaKnown RBP17.97■□□□□ 0.47
CBX3-202ENST00000396386 CCDC87Q9NVE4 849 aa17.97■□□□□ 0.47
CBX3-202ENST00000396386 RPAP1Q9BWH6 1393 aaPredicted RBP17.96■□□□□ 0.47
CBX3-202ENST00000396386 A0A1B0GUL7 405 aa17.96■□□□□ 0.47
CBX3-202ENST00000396386 AK2P54819 239 aa17.96■□□□□ 0.47
CBX3-202ENST00000396386 RNF20Q5VTR2 975 aa17.96■□□□□ 0.47
CBX3-202ENST00000396386 AKAP2Q9Y2D5 859 aa17.96■□□□□ 0.47
CBX3-202ENST00000396386 ARAP2Q8WZ64 1704 aa17.95■□□□□ 0.46
CBX3-202ENST00000396386 SLC27A2O14975 620 aa17.95■□□□□ 0.46
CBX3-202ENST00000396386 CTSWP56202 376 aa17.95■□□□□ 0.46
CBX3-202ENST00000396386 DDX46Q7L014 1031 aaKnown RBP17.95■□□□□ 0.46
CBX3-202ENST00000396386 ZNF589Q86UQ0 364 aaPredicted RBP17.95■□□□□ 0.46
CBX3-202ENST00000396386 TICAM2Q86XR7 235 aa17.95■□□□□ 0.46
CBX3-202ENST00000396386 PAG1Q9NWQ8 432 aa17.95■□□□□ 0.46
CBX3-202ENST00000396386 CYP46A1Q9Y6A2 500 aa17.95■□□□□ 0.46
CBX3-202ENST00000396386 NDUFB9Q9Y6M9 179 aa17.95■□□□□ 0.46
CBX3-202ENST00000396386 SH3TC1Q8TE82 1336 aa17.95■□□□□ 0.46
CBX3-202ENST00000396386 TIMM10P62072 90 aa17.95■□□□□ 0.46
CBX3-202ENST00000396386 VPS53Q5VIR6 699 aa17.95■□□□□ 0.46
CBX3-202ENST00000396386 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.95■□□□□ 0.46
CBX3-202ENST00000396386 ZSWIM6Q9HCJ5 1215 aa17.95■□□□□ 0.46
CBX3-202ENST00000396386 HMG20BQ9P0W2 317 aa17.95■□□□□ 0.46
CBX3-202ENST00000396386 LIMCH1Q9UPQ0 1083 aa17.95■□□□□ 0.46
CBX3-202ENST00000396386 MYH7P12883 1935 aa17.94■□□□□ 0.46
CBX3-202ENST00000396386 DDX60Q8IY21 1712 aaKnown RBP17.94■□□□□ 0.46
CBX3-202ENST00000396386 MYH14Q7Z406 1995 aaKnown RBP17.94■□□□□ 0.46
CBX3-202ENST00000396386 LOC102724428A0A0B4J2F2 783 aa17.94■□□□□ 0.46
CBX3-202ENST00000396386 ATP6V1AP38606 617 aa17.94■□□□□ 0.46
CBX3-202ENST00000396386 EIF5P55010 431 aaKnown RBP17.94■□□□□ 0.46
CBX3-202ENST00000396386 SIK1P57059 783 aa17.94■□□□□ 0.46
CBX3-202ENST00000396386 ADCK5Q3MIX3 580 aa17.94■□□□□ 0.46
CBX3-202ENST00000396386 CCDC85AQ96PX6 553 aaPredicted RBP17.94■□□□□ 0.46
CBX3-202ENST00000396386 PDRG1Q9NUG6 133 aa17.94■□□□□ 0.46
CBX3-202ENST00000396386 TRMT112Q9UI30 125 aaKnown RBP17.94■□□□□ 0.46
CBX3-202ENST00000396386 TBC1D2BQ9UPU7 963 aa17.94■□□□□ 0.46
CBX3-202ENST00000396386 IRS4O14654 1257 aaPredicted RBP17.93■□□□□ 0.46
CBX3-202ENST00000396386 TAF5LO75529 589 aa17.93■□□□□ 0.46
CBX3-202ENST00000396386 PSMA5P28066 241 aa17.93■□□□□ 0.46
CBX3-202ENST00000396386 CRKLP46109 303 aaKnown RBP17.93■□□□□ 0.46
CBX3-202ENST00000396386 INTS5Q6P9B9 1019 aaKnown RBP17.93■□□□□ 0.46
CBX3-202ENST00000396386 RUFY3Q7L099 469 aa17.93■□□□□ 0.46
CBX3-202ENST00000396386 ZDHHC9Q9Y397 364 aa17.93■□□□□ 0.46
CBX3-202ENST00000396386 UBN2Q6ZU65 1347 aa17.93■□□□□ 0.46
CBX3-202ENST00000396386 ABCC12Q96J65 1359 aa17.93■□□□□ 0.46
CBX3-202ENST00000396386 GOLIM4O00461 696 aa17.92■□□□□ 0.46
CBX3-202ENST00000396386 IFIT1P09914 478 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms