RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 IGKV5-2P06315 115 aa22.33■■□□□ 1.17
UPK3A-202ENST00000396082 CWF19L2Q2TBE0 894 aaKnown RBP22.33■■□□□ 1.17
UPK3A-202ENST00000396082 SLC51AQ86UW1 340 aa22.33■■□□□ 1.17
UPK3A-202ENST00000396082 DNAAF4Q8WXU2 420 aa22.33■■□□□ 1.17
UPK3A-202ENST00000396082 JDP2Q8WYK2 163 aa22.33■■□□□ 1.17
UPK3A-202ENST00000396082 NEURL1BA8MQ27 555 aa22.32■■□□□ 1.16
UPK3A-202ENST00000396082 PDE8AO60658 829 aa22.32■■□□□ 1.16
UPK3A-202ENST00000396082 TMC4Q7Z404 712 aa22.32■■□□□ 1.16
UPK3A-202ENST00000396082 SP8Q8IXZ3 490 aa22.32■■□□□ 1.16
UPK3A-202ENST00000396082 VEGFAP15692 232 aaPredicted RBP22.31■■□□□ 1.16
UPK3A-202ENST00000396082 DPP8Q6V1X1 898 aaPredicted RBP22.31■■□□□ 1.16
UPK3A-202ENST00000396082 LARGE2Q8N3Y3 721 aa22.31■■□□□ 1.16
UPK3A-202ENST00000396082 WDR90Q96KV7 1748 aa22.31■■□□□ 1.16
UPK3A-202ENST00000396082 CDHR2Q9BYE9 1310 aa22.31■■□□□ 1.16
UPK3A-202ENST00000396082 CCDC152Q4G0S7 254 aa22.3■■□□□ 1.16
UPK3A-202ENST00000396082 MPNDQ8N594 471 aa22.3■■□□□ 1.16
UPK3A-202ENST00000396082 SUPT20HQ8NEM7 779 aa22.3■■□□□ 1.16
UPK3A-202ENST00000396082 CELF1Q92879 486 aaKnown RBP22.3■■□□□ 1.16
UPK3A-202ENST00000396082 PPIP5K2O43314 1243 aa22.29■■□□□ 1.16
UPK3A-202ENST00000396082 DDNO94850 711 aaPredicted RBP22.29■■□□□ 1.16
UPK3A-202ENST00000396082 SLFN5Q08AF3 891 aa22.29■■□□□ 1.16
UPK3A-202ENST00000396082 MIER1Q8N108 512 aa22.29■■□□□ 1.16
UPK3A-202ENST00000396082 CCDC85AQ96PX6 553 aaPredicted RBP22.29■■□□□ 1.16
UPK3A-202ENST00000396082 MYH3P11055 1940 aa22.28■■□□□ 1.16
UPK3A-202ENST00000396082 UBE3BQ7Z3V4 1068 aa22.28■■□□□ 1.16
UPK3A-202ENST00000396082 LINS1Q8NG48 757 aa22.28■■□□□ 1.16
UPK3A-202ENST00000396082 RBM46Q8TBY0 533 aaKnown RBP22.28■■□□□ 1.16
UPK3A-202ENST00000396082 LRRC37AA6NMS7 1700 aa22.28■■□□□ 1.16
UPK3A-202ENST00000396082 ZNF541Q9H0D2 1346 aa22.28■■□□□ 1.16
UPK3A-202ENST00000396082 F6X3S4 739 aa22.27■■□□□ 1.16
UPK3A-202ENST00000396082 GCKRQ14397 625 aa22.27■■□□□ 1.16
UPK3A-202ENST00000396082 NIM1KQ8IY84 436 aa22.27■■□□□ 1.16
UPK3A-202ENST00000396082 CDCA7LQ96GN5 454 aa22.27■■□□□ 1.16
UPK3A-202ENST00000396082 EIF6P56537 245 aaKnown RBP22.26■■□□□ 1.15
UPK3A-202ENST00000396082 RPS8P62241 208 aaKnown RBP22.26■■□□□ 1.15
UPK3A-202ENST00000396082 AOC3Q16853 763 aa22.26■■□□□ 1.15
UPK3A-202ENST00000396082 SEC31BQ9NQW1 1179 aa22.26■■□□□ 1.15
UPK3A-202ENST00000396082 FZD9O00144 591 aa22.25■■□□□ 1.15
UPK3A-202ENST00000396082 CTSWP56202 376 aa22.25■■□□□ 1.15
UPK3A-202ENST00000396082 NSFL1CQ9UNZ2 370 aaKnown RBP22.25■■□□□ 1.15
UPK3A-202ENST00000396082 COL4A1P02462 1669 aa22.24■■□□□ 1.15
UPK3A-202ENST00000396082 COL4A5P29400 1685 aa22.24■■□□□ 1.15
UPK3A-202ENST00000396082 HSPA6P17066 643 aa22.24■■□□□ 1.15
UPK3A-202ENST00000396082 RTFDC1Q9BY42 306 aaPredicted RBP22.24■■□□□ 1.15
UPK3A-202ENST00000396082 VPS33BQ9H267 617 aa22.24■■□□□ 1.15
UPK3A-202ENST00000396082 IQCA1LA6NCM1 817 aa22.23■■□□□ 1.15
UPK3A-202ENST00000396082 H7C1W4 665 aa22.23■■□□□ 1.15
UPK3A-202ENST00000396082 SLC4A10Q6U841 1118 aa22.23■■□□□ 1.15
UPK3A-202ENST00000396082 SMC1BQ8NDV3 1235 aa22.23■■□□□ 1.15
UPK3A-202ENST00000396082 GJA3Q9Y6H8 435 aa22.23■■□□□ 1.15
UPK3A-202ENST00000396082 SCN4AP35499 1836 aa22.22■■□□□ 1.15
UPK3A-202ENST00000396082 POTECB2RU33 542 aa22.22■■□□□ 1.15
UPK3A-202ENST00000396082 FSTL1Q12841 308 aa22.22■■□□□ 1.15
UPK3A-202ENST00000396082 ANKRD18AQ8IVF6 992 aa22.22■■□□□ 1.15
UPK3A-202ENST00000396082 L3MBTL3Q96JM7 780 aaPredicted RBP22.22■■□□□ 1.15
UPK3A-202ENST00000396082 CDC5LQ99459 802 aaKnown RBP22.22■■□□□ 1.15
UPK3A-202ENST00000396082 C6orf229H3BNL8 230 aa22.21■■□□□ 1.15
UPK3A-202ENST00000396082 KIAA2012Q0VF49 1180 aa22.21■■□□□ 1.15
UPK3A-202ENST00000396082 BEND3Q5T5X7 828 aa22.21■■□□□ 1.15
UPK3A-202ENST00000396082 GPC2Q8N158 579 aa22.21■■□□□ 1.15
UPK3A-202ENST00000396082 TTLL11Q8NHH1 800 aa22.21■■□□□ 1.15
UPK3A-202ENST00000396082 DUOX1Q9NRD9 1551 aa22.21■■□□□ 1.15
UPK3A-202ENST00000396082 GPSM2P81274 684 aa22.2■■□□□ 1.14
UPK3A-202ENST00000396082 MRPL50Q8N5N7 158 aaKnown RBP22.2■■□□□ 1.14
UPK3A-202ENST00000396082 GREM2Q9H772 168 aa22.2■■□□□ 1.14
UPK3A-202ENST00000396082 SPEF2Q9C093 1822 aa22.2■■□□□ 1.14
UPK3A-202ENST00000396082 SSH1Q8WYL5 1049 aa22.19■■□□□ 1.14
UPK3A-202ENST00000396082 PLA2G12BQ9BX93 195 aa22.19■■□□□ 1.14
UPK3A-202ENST00000396082 BCL2L13Q9BXK5 485 aa22.19■■□□□ 1.14
UPK3A-202ENST00000396082 ANKIB1Q9P2G1 1089 aa22.19■■□□□ 1.14
UPK3A-202ENST00000396082 HACL1Q9UJ83 578 aa22.19■■□□□ 1.14
UPK3A-202ENST00000396082 WASHC4Q2M389 1173 aa22.18■■□□□ 1.14
UPK3A-202ENST00000396082 EYA3Q99504 573 aa22.18■■□□□ 1.14
UPK3A-202ENST00000396082 SRCIN1Q9C0H9 1055 aa22.18■■□□□ 1.14
UPK3A-202ENST00000396082 ZNRF3Q9ULT6 936 aa22.18■■□□□ 1.14
UPK3A-202ENST00000396082 RTL9Q8NET4 1388 aa22.17■■□□□ 1.14
UPK3A-202ENST00000396082 PTPRCP08575 1304 aa22.17■■□□□ 1.14
UPK3A-202ENST00000396082 RIMBP2O15034 1052 aa22.17■■□□□ 1.14
UPK3A-202ENST00000396082 LMOD1P29536 600 aaPredicted RBP22.17■■□□□ 1.14
UPK3A-202ENST00000396082 CASP7P55210 303 aa22.17■■□□□ 1.14
UPK3A-202ENST00000396082 TRMT2AQ8IZ69 625 aaKnown RBP22.17■■□□□ 1.14
UPK3A-202ENST00000396082 SMC4Q9NTJ3 1288 aa22.17■■□□□ 1.14
UPK3A-202ENST00000396082 C9orf78Q9NZ63 289 aaPredicted RBP22.17■■□□□ 1.14
UPK3A-202ENST00000396082 ALDH1L1O75891 902 aa22.16■■□□□ 1.14
UPK3A-202ENST00000396082 UFL1O94874 794 aa22.16■■□□□ 1.14
UPK3A-202ENST00000396082 CT47B1P0C2W7 299 aaPredicted RBP22.16■■□□□ 1.14
UPK3A-202ENST00000396082 ALDH1L2Q3SY69 923 aa22.16■■□□□ 1.14
UPK3A-202ENST00000396082 EAPPQ56P03 285 aaPredicted RBP22.16■■□□□ 1.14
UPK3A-202ENST00000396082 TAF1DQ9H5J8 278 aaPredicted RBP22.16■■□□□ 1.14
UPK3A-202ENST00000396082 POLLQ9UGP5 575 aa22.16■■□□□ 1.14
UPK3A-202ENST00000396082 LTBP1Q14766 1721 aa22.16■■□□□ 1.14
UPK3A-202ENST00000396082 GRM8O00222 908 aa22.15■■□□□ 1.14
UPK3A-202ENST00000396082 EPHX2P34913 555 aa22.15■■□□□ 1.14
UPK3A-202ENST00000396082 IGHMBP2P38935 993 aaKnown RBP22.15■■□□□ 1.14
UPK3A-202ENST00000396082 APLP1P51693 650 aa22.15■■□□□ 1.14
UPK3A-202ENST00000396082 HNRNPUQ00839 825 aaKnown RBP eCLIP22.15■■□□□ 1.14
UPK3A-202ENST00000396082 FAM161AQ3B820 660 aa22.15■■□□□ 1.14
UPK3A-202ENST00000396082 TBC1D16Q8TBP0 767 aa22.15■■□□□ 1.14
UPK3A-202ENST00000396082 GGA1Q9UJY5 639 aa22.15■■□□□ 1.14
UPK3A-202ENST00000396082 CHMP3Q9Y3E7 222 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms