RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 TAF5LO75529 589 aa18.56■□□□□ 0.56
CPSF7-202ENST00000394888 USP48Q86UV5 1035 aa18.56■□□□□ 0.56
CPSF7-202ENST00000394888 GOLGA6L22H0YM25 854 aa18.55■□□□□ 0.56
CPSF7-202ENST00000394888 ALDH8A1Q9H2A2 487 aaPredicted RBP18.55■□□□□ 0.56
CPSF7-202ENST00000394888 LRSAM1Q6UWE0 723 aa18.55■□□□□ 0.56
CPSF7-202ENST00000394888 DOT1LQ8TEK3 1739 aa18.55■□□□□ 0.56
CPSF7-202ENST00000394888 PCDH11XQ9BZA7 1347 aa18.55■□□□□ 0.56
CPSF7-202ENST00000394888 PCDH11YQ9BZA8 1340 aa18.55■□□□□ 0.56
CPSF7-202ENST00000394888 SLFNL1Q499Z3 407 aa18.55■□□□□ 0.56
CPSF7-202ENST00000394888 DIAPH3Q9NSV4 1193 aa18.55■□□□□ 0.56
CPSF7-202ENST00000394888 NRAPQ86VF7 1730 aa18.55■□□□□ 0.56
CPSF7-202ENST00000394888 MTMR6Q9Y217 621 aa18.54■□□□□ 0.56
CPSF7-202ENST00000394888 A0A1B0GUL6 1792 aa18.54■□□□□ 0.56
CPSF7-202ENST00000394888 NASPP49321 788 aaPredicted RBP18.54■□□□□ 0.56
CPSF7-202ENST00000394888 JAKMIP1Q96N16 626 aaKnown RBP18.54■□□□□ 0.56
CPSF7-202ENST00000394888 CICQ96RK0 1608 aaPredicted RBP18.54■□□□□ 0.56
CPSF7-202ENST00000394888 G3BP1Q13283 466 aaKnown RBP eCLIP18.54■□□□□ 0.56
CPSF7-202ENST00000394888 DBNDD2Q9BQY9 259 aa18.54■□□□□ 0.56
CPSF7-202ENST00000394888 A1BGP04217 495 aa18.53■□□□□ 0.56
CPSF7-202ENST00000394888 ZSCAN22P10073 491 aaPredicted RBP18.53■□□□□ 0.56
CPSF7-202ENST00000394888 CABP4P57796 275 aa18.53■□□□□ 0.56
CPSF7-202ENST00000394888 PALLDQ8WX93 1383 aa18.53■□□□□ 0.56
CPSF7-202ENST00000394888 SYCE3A1L190 88 aa18.53■□□□□ 0.56
CPSF7-202ENST00000394888 SEC62Q99442 399 aaKnown RBP18.53■□□□□ 0.56
CPSF7-202ENST00000394888 CNPY2Q9Y2B0 182 aa18.53■□□□□ 0.56
CPSF7-202ENST00000394888 COL14A1Q05707 1796 aaKnown RBP18.53■□□□□ 0.56
CPSF7-202ENST00000394888 C4AP0C0L4 1744 aa18.53■□□□□ 0.56
CPSF7-202ENST00000394888 C4BP0C0L5 1744 aa18.53■□□□□ 0.56
CPSF7-202ENST00000394888 COL4A1P02462 1669 aa18.53■□□□□ 0.56
CPSF7-202ENST00000394888 DOCK2Q92608 1830 aa18.53■□□□□ 0.56
CPSF7-202ENST00000394888 ZNF335Q9H4Z2 1342 aaPredicted RBP18.53■□□□□ 0.56
CPSF7-202ENST00000394888 ERVV-2B6SEH9 535 aa18.52■□□□□ 0.56
CPSF7-202ENST00000394888 FOXP2O15409 715 aa18.52■□□□□ 0.56
CPSF7-202ENST00000394888 HAUS7Q99871 368 aa18.52■□□□□ 0.56
CPSF7-202ENST00000394888 A0A087WZG4 1122 aa18.52■□□□□ 0.55
CPSF7-202ENST00000394888 A0A0G2JLW4 131 aa18.52■□□□□ 0.55
CPSF7-202ENST00000394888 CSB-PGBD3P0DP91 1061 aa18.52■□□□□ 0.55
CPSF7-202ENST00000394888 WDR33Q9C0J8 1336 aaKnown RBP18.52■□□□□ 0.55
CPSF7-202ENST00000394888 ZCRB1Q8TBF4 217 aaKnown RBP18.51■□□□□ 0.55
CPSF7-202ENST00000394888 PDRG1Q9NUG6 133 aa18.51■□□□□ 0.55
CPSF7-202ENST00000394888 CARD10Q9BWT7 1032 aa18.51■□□□□ 0.55
CPSF7-202ENST00000394888 STX6O43752 255 aa18.51■□□□□ 0.55
CPSF7-202ENST00000394888 F13A1P00488 732 aa18.51■□□□□ 0.55
CPSF7-202ENST00000394888 NEXNQ0ZGT2 675 aa18.51■□□□□ 0.55
CPSF7-202ENST00000394888 CCDC83Q8IWF9 413 aa18.51■□□□□ 0.55
CPSF7-202ENST00000394888 FUCA2Q9BTY2 467 aa18.51■□□□□ 0.55
CPSF7-202ENST00000394888 STOX1Q6ZVD7 989 aa18.5■□□□□ 0.55
CPSF7-202ENST00000394888 TTC5Q8N0Z6 440 aa18.5■□□□□ 0.55
CPSF7-202ENST00000394888 NECAB1Q8N987 351 aa18.5■□□□□ 0.55
CPSF7-202ENST00000394888 RIC1Q4ADV7 1423 aa18.5■□□□□ 0.55
CPSF7-202ENST00000394888 ESPNB1AK53 854 aa18.5■□□□□ 0.55
CPSF7-202ENST00000394888 LMBR1LQ6UX01 489 aa18.5■□□□□ 0.55
CPSF7-202ENST00000394888 CCDC129Q6ZRS4 1044 aa18.5■□□□□ 0.55
CPSF7-202ENST00000394888 HDAC5Q9UQL6 1122 aa18.5■□□□□ 0.55
CPSF7-202ENST00000394888 GJB2P29033 226 aa18.5■□□□□ 0.55
CPSF7-202ENST00000394888 CCDC173Q0VFZ6 552 aa18.5■□□□□ 0.55
CPSF7-202ENST00000394888 RUFY2Q8WXA3 655 aa18.5■□□□□ 0.55
CPSF7-202ENST00000394888 GPATCH3Q96I76 525 aa18.5■□□□□ 0.55
CPSF7-202ENST00000394888 LAMB2P55268 1798 aa18.49■□□□□ 0.55
CPSF7-202ENST00000394888 RPS6KB1P23443 525 aa18.49■□□□□ 0.55
CPSF7-202ENST00000394888 TCEANC2Q96MN5 208 aa18.49■□□□□ 0.55
CPSF7-202ENST00000394888 KDM4FA0A1W2PPD8 638 aa18.48■□□□□ 0.55
CPSF7-202ENST00000394888 FOXD4L6Q3SYB3 417 aaPredicted RBP18.48■□□□□ 0.55
CPSF7-202ENST00000394888 LRRC24Q50LG9 513 aa18.48■□□□□ 0.55
CPSF7-202ENST00000394888 FOXD4L3Q6VB84 417 aaPredicted RBP18.48■□□□□ 0.55
CPSF7-202ENST00000394888 ISCA1Q9BUE6 129 aa18.48■□□□□ 0.55
CPSF7-202ENST00000394888 SLAIN2Q9P270 581 aa18.48■□□□□ 0.55
CPSF7-202ENST00000394888 SLC4A9Q96Q91 983 aa18.48■□□□□ 0.55
CPSF7-202ENST00000394888 ROBO1Q9Y6N7 1651 aa18.48■□□□□ 0.55
CPSF7-202ENST00000394888 SH3TC1Q8TE82 1336 aa18.47■□□□□ 0.55
CPSF7-202ENST00000394888 KIAA1211Q6ZU35 1233 aa18.47■□□□□ 0.55
CPSF7-202ENST00000394888 FSD1Q9BTV5 496 aa18.47■□□□□ 0.55
CPSF7-202ENST00000394888 CYP46A1Q9Y6A2 500 aa18.47■□□□□ 0.55
CPSF7-202ENST00000394888 CYP21A2P08686 494 aa18.46■□□□□ 0.55
CPSF7-202ENST00000394888 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.46■□□□□ 0.55
CPSF7-202ENST00000394888 MBD3O95983 291 aa18.46■□□□□ 0.55
CPSF7-202ENST00000394888 ZNF594Q96JF6 807 aaPredicted RBP18.46■□□□□ 0.55
CPSF7-202ENST00000394888 PUS3Q9BZE2 481 aaKnown RBP18.46■□□□□ 0.55
CPSF7-202ENST00000394888 HIP1O00291 1037 aa18.46■□□□□ 0.55
CPSF7-202ENST00000394888 NCLP19338 710 aaKnown RBP18.45■□□□□ 0.54
CPSF7-202ENST00000394888 MYH14Q7Z406 1995 aaKnown RBP18.45■□□□□ 0.54
CPSF7-202ENST00000394888 IL2RBP14784 551 aa18.45■□□□□ 0.54
CPSF7-202ENST00000394888 CDC37L1Q7L3B6 337 aa18.45■□□□□ 0.54
CPSF7-202ENST00000394888 COL5A3P25940 1745 aaPredicted RBP18.45■□□□□ 0.54
CPSF7-202ENST00000394888 SH2B1Q9NRF2 756 aaPredicted RBP18.45■□□□□ 0.54
CPSF7-202ENST00000394888 GPR108Q9NPR9 543 aa18.44■□□□□ 0.54
CPSF7-202ENST00000394888 PRDM11Q9NQV5 511 aa18.44■□□□□ 0.54
CPSF7-202ENST00000394888 DNAJC5Q9H3Z4 198 aa18.44■□□□□ 0.54
CPSF7-202ENST00000394888 DNM1Q05193 864 aaKnown RBP18.44■□□□□ 0.54
CPSF7-202ENST00000394888 TOM1L2Q6ZVM7 507 aa18.44■□□□□ 0.54
CPSF7-202ENST00000394888 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.44■□□□□ 0.54
CPSF7-202ENST00000394888 CHD4Q14839 1912 aa18.43■□□□□ 0.54
CPSF7-202ENST00000394888 BCL9O00512 1426 aa18.43■□□□□ 0.54
CPSF7-202ENST00000394888 TIMM10P62072 90 aa18.43■□□□□ 0.54
CPSF7-202ENST00000394888 DDX46Q7L014 1031 aaKnown RBP18.43■□□□□ 0.54
CPSF7-202ENST00000394888 BCORQ6W2J9 1755 aa18.43■□□□□ 0.54
CPSF7-202ENST00000394888 AHDC1Q5TGY3 1603 aaPredicted RBP18.43■□□□□ 0.54
CPSF7-202ENST00000394888 KBTBD3Q8NAB2 608 aa18.43■□□□□ 0.54
CPSF7-202ENST00000394888 AGXT2Q9BYV1 514 aa18.43■□□□□ 0.54
CPSF7-202ENST00000394888 ZBTB3Q9H5J0 574 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms