RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PTPN21Q16825 1174 aa15.57■□□□□ 0.08
NFKB1-202ENST00000394820 CCDC82Q8N4S0 544 aa15.57■□□□□ 0.08
NFKB1-202ENST00000394820 USP16Q9Y5T5 823 aa15.57■□□□□ 0.08
NFKB1-202ENST00000394820 C3P01024 1663 aa15.57■□□□□ 0.08
NFKB1-202ENST00000394820 HAND2P61296 217 aa15.57■□□□□ 0.08
NFKB1-202ENST00000394820 CDC37L1Q7L3B6 337 aa15.57■□□□□ 0.08
NFKB1-202ENST00000394820 MNS1Q8NEH6 495 aa15.57■□□□□ 0.08
NFKB1-202ENST00000394820 SETD1AO15047 1707 aaKnown RBP15.57■□□□□ 0.08
NFKB1-202ENST00000394820 VGLL3A8MV65 326 aa15.56■□□□□ 0.08
NFKB1-202ENST00000394820 PSMA5P28066 241 aa15.56■□□□□ 0.08
NFKB1-202ENST00000394820 PTPN14Q15678 1187 aa15.56■□□□□ 0.08
NFKB1-202ENST00000394820 DDX46Q7L014 1031 aaKnown RBP15.56■□□□□ 0.08
NFKB1-202ENST00000394820 MYRIPQ8NFW9 859 aa15.56■□□□□ 0.08
NFKB1-202ENST00000394820 PIBF1Q8WXW3 757 aa15.56■□□□□ 0.08
NFKB1-202ENST00000394820 PDCP20941 246 aa15.56■□□□□ 0.08
NFKB1-202ENST00000394820 CCDC129Q6ZRS4 1044 aa15.56■□□□□ 0.08
NFKB1-202ENST00000394820 BRF1Q92994 677 aa15.56■□□□□ 0.08
NFKB1-202ENST00000394820 ZNF496Q96IT1 587 aaPredicted RBP15.56■□□□□ 0.08
NFKB1-202ENST00000394820 CHMP4AQ9BY43 222 aa15.56■□□□□ 0.08
NFKB1-202ENST00000394820 RGPD8O14715 1765 aaPredicted RBP15.56■□□□□ 0.08
NFKB1-202ENST00000394820 GRM8O00222 908 aa15.56■□□□□ 0.08
NFKB1-202ENST00000394820 DDIT3P35638 169 aa15.56■□□□□ 0.08
NFKB1-202ENST00000394820 HS1BP3Q53T59 392 aa15.56■□□□□ 0.08
NFKB1-202ENST00000394820 LARP1Q6PKG0 1096 aaKnown RBP15.56■□□□□ 0.08
NFKB1-202ENST00000394820 TOM1L2Q6ZVM7 507 aa15.56■□□□□ 0.08
NFKB1-202ENST00000394820 SNRKQ9NRH2 765 aa15.56■□□□□ 0.08
NFKB1-202ENST00000394820 ECHDC1Q9NTX5 307 aa15.55■□□□□ 0.08
NFKB1-202ENST00000394820 JAK2O60674 1132 aa15.55■□□□□ 0.08
NFKB1-202ENST00000394820 FKBP4Q02790 459 aaKnown RBP eCLIP15.55■□□□□ 0.08
NFKB1-202ENST00000394820 STK38Q15208 465 aa15.55■□□□□ 0.08
NFKB1-202ENST00000394820 RUFY3Q7L099 469 aa15.55■□□□□ 0.08
NFKB1-202ENST00000394820 OSBPL3Q9H4L5 887 aa15.55■□□□□ 0.08
NFKB1-202ENST00000394820 TLR7Q9NYK1 1049 aaKnown RBP15.55■□□□□ 0.08
NFKB1-202ENST00000394820 MON2Q7Z3U7 1717 aa15.55■□□□□ 0.08
NFKB1-202ENST00000394820 VIRMAQ69YN4 1812 aaKnown RBP15.54■□□□□ 0.08
NFKB1-202ENST00000394820 ZNF790Q6PG37 636 aa15.54■□□□□ 0.08
NFKB1-202ENST00000394820 NMIQ13287 307 aaPredicted RBP15.54■□□□□ 0.08
NFKB1-202ENST00000394820 HSP90AB3PQ58FF7 597 aa15.54■□□□□ 0.08
NFKB1-202ENST00000394820 OTUD7BQ6GQQ9 843 aa15.54■□□□□ 0.08
NFKB1-202ENST00000394820 PRIMPOLQ96LW4 560 aa15.54■□□□□ 0.08
NFKB1-202ENST00000394820 PRDM11Q9NQV5 511 aa15.54■□□□□ 0.08
NFKB1-202ENST00000394820 HYPKQ9NX55 129 aa15.54■□□□□ 0.08
NFKB1-202ENST00000394820 ZBTB3Q9H5J0 574 aa15.54■□□□□ 0.08
NFKB1-202ENST00000394820 ATP2B3Q16720 1220 aa15.53■□□□□ 0.08
NFKB1-202ENST00000394820 SYNE3Q6ZMZ3 975 aa15.53■□□□□ 0.08
NFKB1-202ENST00000394820 KIF13AQ9H1H9 1805 aa15.53■□□□□ 0.08
NFKB1-202ENST00000394820 KAT6BQ8WYB5 2073 aa15.53■□□□□ 0.08
NFKB1-202ENST00000394820 SKILP12757 684 aa15.53■□□□□ 0.08
NFKB1-202ENST00000394820 FAM200AQ8TCP9 573 aa15.53■□□□□ 0.08
NFKB1-202ENST00000394820 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.53■□□□□ 0.08
NFKB1-202ENST00000394820 KNDC1Q76NI1 1749 aa15.53■□□□□ 0.08
NFKB1-202ENST00000394820 A0A087WZG4 1122 aa15.53■□□□□ 0.08
NFKB1-202ENST00000394820 TPM4P67936 248 aa15.53■□□□□ 0.08
NFKB1-202ENST00000394820 ARID5BQ14865 1188 aa15.53■□□□□ 0.08
NFKB1-202ENST00000394820 ME3Q16798 604 aa15.53■□□□□ 0.08
NFKB1-202ENST00000394820 C19orf44Q9H6X5 657 aa15.53■□□□□ 0.08
NFKB1-202ENST00000394820 EVA1CP58658 441 aa15.52■□□□□ 0.08
NFKB1-202ENST00000394820 CCDC144CPQ8IYA2 1237 aa15.52■□□□□ 0.08
NFKB1-202ENST00000394820 ANKRD13DQ6ZTN6 518 aa15.52■□□□□ 0.07
NFKB1-202ENST00000394820 PI4K2BQ8TCG2 481 aa15.52■□□□□ 0.07
NFKB1-202ENST00000394820 EAF2Q96CJ1 260 aaPredicted RBP15.52■□□□□ 0.07
NFKB1-202ENST00000394820 FTOQ9C0B1 505 aaKnown RBP eCLIP15.52■□□□□ 0.07
NFKB1-202ENST00000394820 SGSM2O43147 1006 aa15.52■□□□□ 0.07
NFKB1-202ENST00000394820 SERPINC1P01008 464 aa15.52■□□□□ 0.07
NFKB1-202ENST00000394820 CEP135Q66GS9 1140 aa15.52■□□□□ 0.07
NFKB1-202ENST00000394820 TTC6Q86TZ1 520 aa15.52■□□□□ 0.07
NFKB1-202ENST00000394820 LINS1Q8NG48 757 aa15.52■□□□□ 0.07
NFKB1-202ENST00000394820 NCOA5Q9HCD5 579 aaKnown RBP15.52■□□□□ 0.07
NFKB1-202ENST00000394820 FSIP1Q8NA03 581 aa15.51■□□□□ 0.07
NFKB1-202ENST00000394820 GTF3C6Q969F1 213 aa15.51■□□□□ 0.07
NFKB1-202ENST00000394820 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.51■□□□□ 0.07
NFKB1-202ENST00000394820 URI1O94763 535 aaPredicted RBP15.51■□□□□ 0.07
NFKB1-202ENST00000394820 GTF2F1P35269 517 aaKnown RBP eCLIP15.51■□□□□ 0.07
NFKB1-202ENST00000394820 CBX8Q9HC52 389 aa15.51■□□□□ 0.07
NFKB1-202ENST00000394820 DDX21Q9NR30 783 aaKnown RBP eCLIP15.51■□□□□ 0.07
NFKB1-202ENST00000394820 ADCY9O60503 1353 aa15.51■□□□□ 0.07
NFKB1-202ENST00000394820 NRKQ7Z2Y5 1582 aa15.51■□□□□ 0.07
NFKB1-202ENST00000394820 TMC6Q7Z403 805 aa15.5■□□□□ 0.07
NFKB1-202ENST00000394820 CCAR1Q8IX12 1150 aaKnown RBP15.5■□□□□ 0.07
NFKB1-202ENST00000394820 IFNL2Q8IZJ0 200 aa15.5■□□□□ 0.07
NFKB1-202ENST00000394820 STAP2Q9UGK3 403 aa15.5■□□□□ 0.07
NFKB1-202ENST00000394820 HDAC5Q9UQL6 1122 aa15.5■□□□□ 0.07
NFKB1-202ENST00000394820 CHGBP05060 677 aa15.5■□□□□ 0.07
NFKB1-202ENST00000394820 CREB3L3Q68CJ9 461 aa15.5■□□□□ 0.07
NFKB1-202ENST00000394820 AOPEPQ8N6M6 819 aa15.5■□□□□ 0.07
NFKB1-202ENST00000394820 INTS4Q96HW7 963 aaKnown RBP15.5■□□□□ 0.07
NFKB1-202ENST00000394820 ZSCAN31Q96LW9 406 aaPredicted RBP15.5■□□□□ 0.07
NFKB1-202ENST00000394820 EPHA10Q5JZY3 1008 aa15.49■□□□□ 0.07
NFKB1-202ENST00000394820 PLCD3Q8N3E9 789 aa15.49■□□□□ 0.07
NFKB1-202ENST00000394820 BBXQ8WY36 941 aaPredicted RBP15.49■□□□□ 0.07
NFKB1-202ENST00000394820 AKAP12Q02952 1782 aa15.49■□□□□ 0.07
NFKB1-202ENST00000394820 NR1I2O75469 434 aa15.49■□□□□ 0.07
NFKB1-202ENST00000394820 LMOD1P29536 600 aaPredicted RBP15.49■□□□□ 0.07
NFKB1-202ENST00000394820 POLA2Q14181 598 aa15.49■□□□□ 0.07
NFKB1-202ENST00000394820 UVSSAQ2YD98 709 aa15.49■□□□□ 0.07
NFKB1-202ENST00000394820 RRP12Q5JTH9 1297 aaKnown RBP15.49■□□□□ 0.07
NFKB1-202ENST00000394820 NFXL1Q6ZNB6 911 aa15.49■□□□□ 0.07
NFKB1-202ENST00000394820 ERC1Q8IUD2 1116 aa15.49■□□□□ 0.07
NFKB1-202ENST00000394820 PDLIM2Q96JY6 352 aa15.49■□□□□ 0.07
NFKB1-202ENST00000394820 SCAND2PQ9GZW5 306 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms