RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 LGR6Q9HBX8 967 aa19.3■□□□□ 0.68
EFEMP1-202ENST00000394555 EDC3Q96F86 508 aaKnown RBP19.3■□□□□ 0.68
EFEMP1-202ENST00000394555 LRRC2Q9BYS8 371 aa19.3■□□□□ 0.68
EFEMP1-202ENST00000394555 NRXN3Q9Y4C0 1643 aa19.29■□□□□ 0.68
EFEMP1-202ENST00000394555 TAF3Q5VWG9 929 aa19.29■□□□□ 0.68
EFEMP1-202ENST00000394555 CCAR1Q8IX12 1150 aaKnown RBP19.29■□□□□ 0.68
EFEMP1-202ENST00000394555 MAP3K2Q9Y2U5 619 aa19.29■□□□□ 0.68
EFEMP1-202ENST00000394555 FGD1P98174 961 aa19.29■□□□□ 0.68
EFEMP1-202ENST00000394555 CDC25BP30305 580 aa19.28■□□□□ 0.68
EFEMP1-202ENST00000394555 HDGFP51858 240 aaKnown RBP19.28■□□□□ 0.68
EFEMP1-202ENST00000394555 EIF4A1P60842 406 aaKnown RBP19.28■□□□□ 0.68
EFEMP1-202ENST00000394555 RESTQ13127 1097 aa19.28■□□□□ 0.68
EFEMP1-202ENST00000394555 G3BP1Q13283 466 aaKnown RBP eCLIP19.28■□□□□ 0.68
EFEMP1-202ENST00000394555 HIP1O00291 1037 aa19.28■□□□□ 0.68
EFEMP1-202ENST00000394555 STX1AQ16623 288 aa19.28■□□□□ 0.68
EFEMP1-202ENST00000394555 NYAP1Q6ZVC0 841 aa19.28■□□□□ 0.68
EFEMP1-202ENST00000394555 ERC1Q8IUD2 1116 aa19.28■□□□□ 0.68
EFEMP1-202ENST00000394555 HOXC9P31274 260 aa19.27■□□□□ 0.68
EFEMP1-202ENST00000394555 RBM6P78332 1123 aaKnown RBP19.27■□□□□ 0.68
EFEMP1-202ENST00000394555 C14orf37Q86TY3 774 aa19.27■□□□□ 0.68
EFEMP1-202ENST00000394555 MRFAP1L1Q96HT8 127 aa19.27■□□□□ 0.68
EFEMP1-202ENST00000394555 ESF1Q9H501 851 aaKnown RBP19.27■□□□□ 0.68
EFEMP1-202ENST00000394555 CFAP45Q9UL16 551 aa19.27■□□□□ 0.68
EFEMP1-202ENST00000394555 SASH1O94885 1247 aa19.27■□□□□ 0.68
EFEMP1-202ENST00000394555 KLHDC4Q8TBB5 520 aa19.27■□□□□ 0.68
EFEMP1-202ENST00000394555 SLC26A8Q96RN1 970 aa19.27■□□□□ 0.68
EFEMP1-202ENST00000394555 CCZ1BP86790 482 aa19.27■□□□□ 0.67
EFEMP1-202ENST00000394555 CCZ1P86791 482 aaPredicted RBP19.27■□□□□ 0.67
EFEMP1-202ENST00000394555 CCAR2Q8N163 923 aaKnown RBP19.27■□□□□ 0.67
EFEMP1-202ENST00000394555 NEMFO60524 1076 aa19.26■□□□□ 0.67
EFEMP1-202ENST00000394555 Q6ZUG5 572 aa19.26■□□□□ 0.67
EFEMP1-202ENST00000394555 ERO1AQ96HE7 468 aa19.26■□□□□ 0.67
EFEMP1-202ENST00000394555 NDUFB9Q9Y6M9 179 aa19.26■□□□□ 0.67
EFEMP1-202ENST00000394555 CACNA1FO60840 1977 aa19.26■□□□□ 0.67
EFEMP1-202ENST00000394555 ADCY9O60503 1353 aa19.26■□□□□ 0.67
EFEMP1-202ENST00000394555 SLU7O95391 586 aaKnown RBP19.26■□□□□ 0.67
EFEMP1-202ENST00000394555 CAVIN2O95810 425 aa19.26■□□□□ 0.67
EFEMP1-202ENST00000394555 SARM1Q6SZW1 724 aa19.26■□□□□ 0.67
EFEMP1-202ENST00000394555 AOPEPQ8N6M6 819 aa19.26■□□□□ 0.67
EFEMP1-202ENST00000394555 GTF3C6Q969F1 213 aa19.26■□□□□ 0.67
EFEMP1-202ENST00000394555 GOLPH3LQ9H4A5 285 aa19.26■□□□□ 0.67
EFEMP1-202ENST00000394555 NAP1L2Q9ULW6 460 aaPredicted RBP19.26■□□□□ 0.67
EFEMP1-202ENST00000394555 CCDC73Q6ZRK6 1079 aa19.25■□□□□ 0.67
EFEMP1-202ENST00000394555 KINO60870 393 aaKnown RBP19.25■□□□□ 0.67
EFEMP1-202ENST00000394555 CHGBP05060 677 aa19.25■□□□□ 0.67
EFEMP1-202ENST00000394555 ERCC6LQ2NKX8 1250 aa19.25■□□□□ 0.67
EFEMP1-202ENST00000394555 NPHP4O75161 1426 aaPredicted RBP19.24■□□□□ 0.67
EFEMP1-202ENST00000394555 GUCY1B3Q02153 619 aa19.24■□□□□ 0.67
EFEMP1-202ENST00000394555 PROSER3Q2NL68 480 aa19.24■□□□□ 0.67
EFEMP1-202ENST00000394555 DHX40Q8IX18 779 aaKnown RBP19.24■□□□□ 0.67
EFEMP1-202ENST00000394555 NEK1Q96PY6 1258 aa19.24■□□□□ 0.67
EFEMP1-202ENST00000394555 BABAM1Q9NWV8 329 aa19.24■□□□□ 0.67
EFEMP1-202ENST00000394555 TECPR2O15040 1411 aa19.24■□□□□ 0.67
EFEMP1-202ENST00000394555 AIMP1Q12904 312 aaKnown RBP19.24■□□□□ 0.67
EFEMP1-202ENST00000394555 MTX1Q13505 466 aa19.24■□□□□ 0.67
EFEMP1-202ENST00000394555 CCDC129Q6ZRS4 1044 aa19.23■□□□□ 0.67
EFEMP1-202ENST00000394555 BTBD11A6QL63 1104 aa19.23■□□□□ 0.67
EFEMP1-202ENST00000394555 ME1P48163 572 aa19.23■□□□□ 0.67
EFEMP1-202ENST00000394555 TEFQ10587 303 aa19.23■□□□□ 0.67
EFEMP1-202ENST00000394555 GORABQ5T7V8 394 aa19.23■□□□□ 0.67
EFEMP1-202ENST00000394555 SUCLG2Q96I99 432 aa19.23■□□□□ 0.67
EFEMP1-202ENST00000394555 FMNL2Q96PY5 1086 aa19.23■□□□□ 0.67
EFEMP1-202ENST00000394555 BICC1Q9H694 974 aaKnown RBP19.23■□□□□ 0.67
EFEMP1-202ENST00000394555 CCDC66A2RUB6 948 aa19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 TAF5LO75529 589 aa19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 SNW1Q13573 536 aaKnown RBP19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 OSCARQ8IYS5 282 aa19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 LRRN4CLQ8ND94 238 aa19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 ZSCAN16Q9H4T2 348 aaPredicted RBP19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 ZNF446Q9NWS9 450 aa19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 GTF2E1P29083 439 aaPredicted RBP19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 SYT10Q6XYQ8 523 aa19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 ANO10Q9NW15 660 aa19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 TMEM51Q9NW97 253 aa19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 CCDC9Q9Y3X0 531 aaKnown RBP19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 SCRN1Q12765 414 aa19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 MPRIPQ6WCQ1 1025 aa19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 CEP57L1Q8IYX8 460 aa19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 USP28Q96RU2 1077 aa19.22■□□□□ 0.67
EFEMP1-202ENST00000394555 FMN2Q9NZ56 1722 aa19.21■□□□□ 0.67
EFEMP1-202ENST00000394555 CTAGE5O15320 804 aa19.21■□□□□ 0.67
EFEMP1-202ENST00000394555 SMC2O95347 1197 aa19.21■□□□□ 0.67
EFEMP1-202ENST00000394555 CCT2P78371 535 aaKnown RBP19.21■□□□□ 0.67
EFEMP1-202ENST00000394555 FSIP1Q8NA03 581 aa19.21■□□□□ 0.67
EFEMP1-202ENST00000394555 SDF4Q9BRK5 362 aa19.21■□□□□ 0.67
EFEMP1-202ENST00000394555 HMG20BQ9P0W2 317 aa19.21■□□□□ 0.67
EFEMP1-202ENST00000394555 GIGYF1O75420 1035 aaPredicted RBP19.21■□□□□ 0.67
EFEMP1-202ENST00000394555 SEC62Q99442 399 aaKnown RBP19.21■□□□□ 0.67
EFEMP1-202ENST00000394555 DBF4Q9UBU7 674 aaPredicted RBP19.21■□□□□ 0.67
EFEMP1-202ENST00000394555 NALCNQ8IZF0 1738 aa19.2■□□□□ 0.66
EFEMP1-202ENST00000394555 TRERF1Q96PN7 1200 aa19.2■□□□□ 0.66
EFEMP1-202ENST00000394555 CRYBG1Q9Y4K1 1723 aa19.2■□□□□ 0.66
EFEMP1-202ENST00000394555 ERBB3P21860 1342 aa19.2■□□□□ 0.66
EFEMP1-202ENST00000394555 ADGRL3Q9HAR2 1447 aa19.2■□□□□ 0.66
EFEMP1-202ENST00000394555 PRAMEF22A3QJZ6 481 aa19.2■□□□□ 0.66
EFEMP1-202ENST00000394555 ABTB2Q8N961 1025 aa19.2■□□□□ 0.66
EFEMP1-202ENST00000394555 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.2■□□□□ 0.66
EFEMP1-202ENST00000394555 VGLL3A8MV65 326 aa19.19■□□□□ 0.66
EFEMP1-202ENST00000394555 CDK11BP21127 795 aaKnown RBP19.19■□□□□ 0.66
EFEMP1-202ENST00000394555 ADD1P35611 737 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms