RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PLA2G4AP47712 749 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 CCT5P48643 541 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 SLC4A10Q6U841 1118 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 IQCA1Q86XH1 822 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 TSR2Q969E8 191 aaKnown RBP8.79□□□□□ -1
VTI1A-201ENST00000393077 UHRF1BP1LA0JNW5 1464 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 SERPINC1P01008 464 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 ZSCAN22P10073 491 aaPredicted RBP8.79□□□□□ -1
VTI1A-201ENST00000393077 PDCP20941 246 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 EXOSC9Q06265 439 aaKnown RBP8.79□□□□□ -1
VTI1A-201ENST00000393077 KIF4BQ2VIQ3 1234 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 FERMT3Q86UX7 667 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 USP16Q9Y5T5 823 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 CFAP65Q6ZU64 1925 aaKnown RBP8.78□□□□□ -1
VTI1A-201ENST00000393077 IRF6O14896 467 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 TRAF1Q13077 416 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 CCDC12Q8WUD4 166 aaPredicted RBP8.78□□□□□ -1
VTI1A-201ENST00000393077 ATAD2Q6PL18 1390 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 PER1O15534 1290 aaPredicted RBP8.78□□□□□ -1
VTI1A-201ENST00000393077 RPSAP08865 295 aaKnown RBP8.78□□□□□ -1
VTI1A-201ENST00000393077 LARP1BQ659C4 914 aaKnown RBP8.78□□□□□ -1
VTI1A-201ENST00000393077 LRRC8AQ8IWT6 810 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 STK11IPQ8N1F8 1099 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 CBX8Q9HC52 389 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 FAN1Q9Y2M0 1017 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 NDUFAB1O14561 156 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 ARHGAP25P42331 645 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 ESCO1Q5FWF5 840 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 CCDC50Q8IVM0 306 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 ABTB2Q8N961 1025 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 FAM76AQ8TAV0 307 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 ZNF446Q9NWS9 450 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 ORC3Q9UBD5 711 aaPredicted RBP8.78□□□□□ -1
VTI1A-201ENST00000393077 ZMYM4Q5VZL5 1548 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 GCFC2P16383 781 aaKnown RBP8.78□□□□□ -1
VTI1A-201ENST00000393077 ARHGEF5Q12774 1597 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 NME9Q86XW9 330 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 DACT1Q9NYF0 836 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 FHOD1Q9Y613 1164 aa8.78□□□□□ -1
VTI1A-201ENST00000393077 POGZQ7Z3K3 1410 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 GOLGA6L9A6NEM1 432 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 HNRNPH1P31943 449 aaKnown RBP8.77□□□□□ -1.01
VTI1A-201ENST00000393077 LONRF2Q1L5Z9 754 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 FBXW10Q5XX13 1052 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 CAGE1Q8TC20 777 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 NECTIN2Q92692 538 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 INCENPQ9NQS7 918 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 ANO10Q9NW15 660 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 UHRF1BP1Q6BDS2 1440 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 TBC1D22AQ8WUA7 517 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 CARD14Q9BXL6 1004 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 SCAND2PQ9GZW5 306 aaPredicted RBP8.77□□□□□ -1.01
VTI1A-201ENST00000393077 BICC1Q9H694 974 aaKnown RBP8.77□□□□□ -1.01
VTI1A-201ENST00000393077 PSD3Q9NYI0 1048 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 PLEKHG2Q9H7P9 1386 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 YEATS2Q9ULM3 1422 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 TRIM27P14373 513 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 BRD3Q15059 726 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 PDCD2Q16342 344 aaPredicted RBP8.77□□□□□ -1.01
VTI1A-201ENST00000393077 NBPF10Q6P3W6 841 aaKnown RBP8.77□□□□□ -1.01
VTI1A-201ENST00000393077 ANKLE2Q86XL3 938 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 ETAA1Q9NY74 926 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 AMOTL2Q9Y2J4 779 aa8.77□□□□□ -1.01
VTI1A-201ENST00000393077 ATP2C2O75185 946 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 PAX7P23759 505 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 MCM3P25205 808 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 ETF1P62495 437 aaKnown RBP8.76□□□□□ -1.01
VTI1A-201ENST00000393077 CEBPZQ03701 1054 aaKnown RBP8.76□□□□□ -1.01
VTI1A-201ENST00000393077 BCAS4Q8TDM0 211 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 INTS4Q96HW7 963 aaKnown RBP8.76□□□□□ -1.01
VTI1A-201ENST00000393077 USP26Q9BXU7 913 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 SRCIN1Q9C0H9 1055 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 EXOC6BQ9Y2D4 811 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 LRRIQ1Q96JM4 1722 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 PDE6BP35913 854 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 RANBP1P43487 201 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 DNM1Q05193 864 aaKnown RBP8.76□□□□□ -1.01
VTI1A-201ENST00000393077 NFXL1Q6ZNB6 911 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 CCDC121Q6ZUS5 278 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 PROSER2Q86WR7 435 aaPredicted RBP8.76□□□□□ -1.01
VTI1A-201ENST00000393077 SPDL1Q96EA4 605 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 FAM204AQ9H8W3 233 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 BSDC1Q9NW68 430 aaPredicted RBP8.76□□□□□ -1.01
VTI1A-201ENST00000393077 PTPRCP08575 1304 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 ZCCHC11Q5TAX3 1644 aaKnown RBP8.76□□□□□ -1.01
VTI1A-201ENST00000393077 E2F5Q15329 346 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 CFAP100Q494V2 611 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 SULT6B1Q6IMI4 303 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 FAM71BQ8TC56 605 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 MIEF2Q96C03 454 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 PPP6R1Q9UPN7 881 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 SPATA31E1Q6ZUB1 1445 aa8.76□□□□□ -1.01
VTI1A-201ENST00000393077 MYO5CQ9NQX4 1742 aa8.75□□□□□ -1.01
VTI1A-201ENST00000393077 WASLO00401 505 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-201ENST00000393077 KIF5CO60282 957 aa8.75□□□□□ -1.01
VTI1A-201ENST00000393077 RHOXF2BP0C7M4 288 aa8.75□□□□□ -1.01
VTI1A-201ENST00000393077 STX1AQ16623 288 aa8.75□□□□□ -1.01
VTI1A-201ENST00000393077 CC2D1AQ6P1N0 951 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-201ENST00000393077 RHOXF2Q9BQY4 288 aa8.75□□□□□ -1.01
VTI1A-201ENST00000393077 PUF60Q9UHX1 559 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms