RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 CCDC85AQ96PX6 553 aaPredicted RBP26.25■■□□□ 1.79
CDCA4-202ENST00000392590 C9orf78Q9NZ63 289 aaPredicted RBP26.25■■□□□ 1.79
CDCA4-202ENST00000392590 RNF181Q9P0P0 153 aa26.25■■□□□ 1.79
CDCA4-202ENST00000392590 CHD4Q14839 1912 aa26.25■■□□□ 1.79
CDCA4-202ENST00000392590 CTSWP56202 376 aa26.24■■□□□ 1.79
CDCA4-202ENST00000392590 API5Q9BZZ5 524 aaKnown RBP26.24■■□□□ 1.79
CDCA4-202ENST00000392590 ATP6V0A2Q9Y487 856 aa26.24■■□□□ 1.79
CDCA4-202ENST00000392590 GRM8O00222 908 aa26.24■■□□□ 1.79
CDCA4-202ENST00000392590 BCAR3O75815 825 aa26.24■■□□□ 1.79
CDCA4-202ENST00000392590 KIF16BQ96L93 1317 aa26.24■■□□□ 1.79
CDCA4-202ENST00000392590 LTBP3Q9NS15 1303 aa26.24■■□□□ 1.79
CDCA4-202ENST00000392590 DDX60Q8IY21 1712 aaKnown RBP26.23■■□□□ 1.79
CDCA4-202ENST00000392590 GRIPAP1Q4V328 841 aa26.23■■□□□ 1.79
CDCA4-202ENST00000392590 TTLL11Q8NHH1 800 aa26.23■■□□□ 1.79
CDCA4-202ENST00000392590 CELF1Q92879 486 aaKnown RBP26.23■■□□□ 1.79
CDCA4-202ENST00000392590 PLA2G12BQ9BX93 195 aa26.23■■□□□ 1.79
CDCA4-202ENST00000392590 PRELPP51888 382 aa26.22■■□□□ 1.79
CDCA4-202ENST00000392590 FKBP4Q02790 459 aaKnown RBP eCLIP26.22■■□□□ 1.79
CDCA4-202ENST00000392590 TMC4Q7Z404 712 aa26.22■■□□□ 1.79
CDCA4-202ENST00000392590 SP8Q8IXZ3 490 aa26.22■■□□□ 1.79
CDCA4-202ENST00000392590 ARHGAP45Q92619 1136 aa26.22■■□□□ 1.79
CDCA4-202ENST00000392590 SEC31BQ9NQW1 1179 aa26.22■■□□□ 1.79
CDCA4-202ENST00000392590 IPO8O15397 1037 aaKnown RBP26.21■■□□□ 1.79
CDCA4-202ENST00000392590 RPS8P62241 208 aaKnown RBP26.21■■□□□ 1.79
CDCA4-202ENST00000392590 SLC51AQ86UW1 340 aa26.2■■□□□ 1.79
CDCA4-202ENST00000392590 LAMB2P55268 1798 aa26.2■■□□□ 1.78
CDCA4-202ENST00000392590 ZNF784Q8NCA9 323 aaPredicted RBP26.19■■□□□ 1.78
CDCA4-202ENST00000392590 FRAT1Q92837 279 aaPredicted RBP26.19■■□□□ 1.78
CDCA4-202ENST00000392590 CACNA1SQ13698 1873 aa26.19■■□□□ 1.78
CDCA4-202ENST00000392590 CCT4P50991 539 aaKnown RBP26.19■■□□□ 1.78
CDCA4-202ENST00000392590 PSMD1Q99460 953 aa26.19■■□□□ 1.78
CDCA4-202ENST00000392590 GREM2Q9H772 168 aa26.19■■□□□ 1.78
CDCA4-202ENST00000392590 CSF1RP07333 972 aa26.17■■□□□ 1.78
CDCA4-202ENST00000392590 NBPF7P0C2Y1 421 aaPredicted RBP26.17■■□□□ 1.78
CDCA4-202ENST00000392590 ZNF277Q9NRM2 450 aaPredicted RBP26.17■■□□□ 1.78
CDCA4-202ENST00000392590 FOXO4P98177 505 aa26.16■■□□□ 1.78
CDCA4-202ENST00000392590 ANKRD18AQ8IVF6 992 aa26.16■■□□□ 1.78
CDCA4-202ENST00000392590 CDC5LQ99459 802 aaKnown RBP26.16■■□□□ 1.78
CDCA4-202ENST00000392590 UTYO14607 1347 aa26.15■■□□□ 1.78
CDCA4-202ENST00000392590 DPP8Q6V1X1 898 aaPredicted RBP26.15■■□□□ 1.78
CDCA4-202ENST00000392590 ATF7IPQ6VMQ6 1270 aa26.15■■□□□ 1.78
CDCA4-202ENST00000392590 MPNDQ8N594 471 aa26.15■■□□□ 1.78
CDCA4-202ENST00000392590 SNED1Q8TER0 1413 aa26.15■■□□□ 1.78
CDCA4-202ENST00000392590 RTL9Q8NET4 1388 aa26.15■■□□□ 1.78
CDCA4-202ENST00000392590 USP44Q9H0E7 712 aa26.14■■□□□ 1.78
CDCA4-202ENST00000392590 YTHDC1Q96MU7 727 aaKnown RBP26.14■■□□□ 1.77
CDCA4-202ENST00000392590 FER1L6Q2WGJ9 1857 aa26.14■■□□□ 1.77
CDCA4-202ENST00000392590 TRIM27P14373 513 aa26.13■■□□□ 1.77
CDCA4-202ENST00000392590 ITGA6P23229 1130 aa26.13■■□□□ 1.77
CDCA4-202ENST00000392590 IARSP41252 1262 aaKnown RBP26.13■■□□□ 1.77
CDCA4-202ENST00000392590 FAM161AQ3B820 660 aa26.13■■□□□ 1.77
CDCA4-202ENST00000392590 EPHA10Q5JZY3 1008 aa26.13■■□□□ 1.77
CDCA4-202ENST00000392590 ZKSCAN2Q63HK3 967 aa26.13■■□□□ 1.77
CDCA4-202ENST00000392590 LMBR1LQ6UX01 489 aa26.13■■□□□ 1.77
CDCA4-202ENST00000392590 ZNF526Q8TF50 670 aaPredicted RBP26.13■■□□□ 1.77
CDCA4-202ENST00000392590 SUCLG2Q96I99 432 aa26.13■■□□□ 1.77
CDCA4-202ENST00000392590 CHMP3Q9Y3E7 222 aa26.13■■□□□ 1.77
CDCA4-202ENST00000392590 ZC3H4Q9UPT8 1303 aaKnown RBP26.12■■□□□ 1.77
CDCA4-202ENST00000392590 SUPT20HQ8NEM7 779 aa26.12■■□□□ 1.77
CDCA4-202ENST00000392590 NSFL1CQ9UNZ2 370 aaKnown RBP26.12■■□□□ 1.77
CDCA4-202ENST00000392590 RTFDC1Q9BY42 306 aaPredicted RBP26.11■■□□□ 1.77
CDCA4-202ENST00000392590 ANKRD18BA2A2Z9 1011 aa26.1■■□□□ 1.77
CDCA4-202ENST00000392590 INTS3Q68E01 1043 aaKnown RBP26.1■■□□□ 1.77
CDCA4-202ENST00000392590 KAZALD1Q96I82 304 aa26.1■■□□□ 1.77
CDCA4-202ENST00000392590 IGHMBP2P38935 993 aaKnown RBP26.09■■□□□ 1.77
CDCA4-202ENST00000392590 GPSM2P81274 684 aa26.09■■□□□ 1.77
CDCA4-202ENST00000392590 IFIT5Q13325 482 aaKnown RBP26.09■■□□□ 1.77
CDCA4-202ENST00000392590 CLUAP1Q96AJ1 413 aa26.09■■□□□ 1.77
CDCA4-202ENST00000392590 GPBP1L1Q9HC44 474 aaPredicted RBP26.09■■□□□ 1.77
CDCA4-202ENST00000392590 BSDC1Q9NW68 430 aaPredicted RBP26.09■■□□□ 1.77
CDCA4-202ENST00000392590 COL4A1P02462 1669 aa26.09■■□□□ 1.77
CDCA4-202ENST00000392590 VPS33BQ9H267 617 aa26.09■■□□□ 1.77
CDCA4-202ENST00000392590 TNNQ9UQP3 1299 aa26.09■■□□□ 1.77
CDCA4-202ENST00000392590 SBF1O95248 1867 aa26.08■■□□□ 1.77
CDCA4-202ENST00000392590 TAF1P21675 1872 aa26.08■■□□□ 1.77
CDCA4-202ENST00000392590 LARGE2Q8N3Y3 721 aa26.08■■□□□ 1.77
CDCA4-202ENST00000392590 JDP2Q8WYK2 163 aa26.08■■□□□ 1.77
CDCA4-202ENST00000392590 CCDC57Q2TAC2 916 aa26.07■■□□□ 1.76
CDCA4-202ENST00000392590 MPHOSPH8Q99549 860 aa26.07■■□□□ 1.76
CDCA4-202ENST00000392590 BICC1Q9H694 974 aaKnown RBP26.07■■□□□ 1.76
CDCA4-202ENST00000392590 ANKIB1Q9P2G1 1089 aa26.07■■□□□ 1.76
CDCA4-202ENST00000392590 PPIP5K2O43314 1243 aa26.06■■□□□ 1.76
CDCA4-202ENST00000392590 UBTFL1P0CB47 393 aaPredicted RBP26.06■■□□□ 1.76
CDCA4-202ENST00000392590 DPY19L2Q6NUT2 758 aa26.06■■□□□ 1.76
CDCA4-202ENST00000392590 RCAN3Q9UKA8 241 aa26.06■■□□□ 1.76
CDCA4-202ENST00000392590 C6orf229H3BNL8 230 aa26.05■■□□□ 1.76
CDCA4-202ENST00000392590 AOC3Q16853 763 aa26.05■■□□□ 1.76
CDCA4-202ENST00000392590 PODXL2Q9NZ53 605 aa26.05■■□□□ 1.76
CDCA4-202ENST00000392590 MINPP1Q9UNW1 487 aa26.05■■□□□ 1.76
CDCA4-202ENST00000392590 KDM2BQ8NHM5 1336 aa26.05■■□□□ 1.76
CDCA4-202ENST00000392590 GLTPD2A6NH11 291 aa26.04■■□□□ 1.76
CDCA4-202ENST00000392590 RABL6Q3YEC7 729 aaPredicted RBP26.04■■□□□ 1.76
CDCA4-202ENST00000392590 POLLQ9UGP5 575 aa26.04■■□□□ 1.76
CDCA4-202ENST00000392590 HDAC5Q9UQL6 1122 aa26.04■■□□□ 1.76
CDCA4-202ENST00000392590 TAF7LQ5H9L4 462 aa26.04■■□□□ 1.76
CDCA4-202ENST00000392590 TBC1D16Q8TBP0 767 aa26.04■■□□□ 1.76
CDCA4-202ENST00000392590 KIAA2012Q0VF49 1180 aa26.03■■□□□ 1.76
CDCA4-202ENST00000392590 FTSJ3Q8IY81 847 aaKnown RBP26.03■■□□□ 1.76
CDCA4-202ENST00000392590 NIM1KQ8IY84 436 aa26.03■■□□□ 1.76
CDCA4-202ENST00000392590 ANKRD44Q8N8A2 993 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms