RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 BCL11AQ9H165 835 aa5.22□□□□□ -1.57
PTPRC-205ENST00000391970 CHRDQ9H2X0 955 aa5.22□□□□□ -1.57
PTPRC-205ENST00000391970 STRN4Q9NRL3 753 aa5.22□□□□□ -1.57
PTPRC-205ENST00000391970 RNF19AQ9NV58 838 aa5.22□□□□□ -1.57
PTPRC-205ENST00000391970 ABI2Q9NYB9 513 aaPredicted RBP5.22□□□□□ -1.57
PTPRC-205ENST00000391970 PARP2Q9UGN5 583 aa5.22□□□□□ -1.57
PTPRC-205ENST00000391970 ATXN7L1Q9ULK2 861 aaPredicted RBP5.22□□□□□ -1.57
PTPRC-205ENST00000391970 C11orf95C9JLR9 678 aaPredicted RBP5.21□□□□□ -1.58
PTPRC-205ENST00000391970 PPFIA3O75145 1194 aa5.21□□□□□ -1.58
PTPRC-205ENST00000391970 RECKO95980 971 aa5.21□□□□□ -1.58
PTPRC-205ENST00000391970 XPCQ01831 940 aaPredicted RBP5.21□□□□□ -1.58
PTPRC-205ENST00000391970 CCINQ13939 588 aa5.21□□□□□ -1.58
PTPRC-205ENST00000391970 GRIN2CQ14957 1233 aa5.21□□□□□ -1.58
PTPRC-205ENST00000391970 USPL1Q5W0Q7 1092 aa5.21□□□□□ -1.58
PTPRC-205ENST00000391970 TMC4Q7Z404 712 aa5.21□□□□□ -1.58
PTPRC-205ENST00000391970 GTPBP3Q969Y2 492 aaKnown RBP5.21□□□□□ -1.58
PTPRC-205ENST00000391970 GSX2Q9BZM3 304 aa5.21□□□□□ -1.58
PTPRC-205ENST00000391970 ZFYVE28Q9HCC9 887 aa5.21□□□□□ -1.58
PTPRC-205ENST00000391970 IGSF5Q9NSI5 407 aa5.21□□□□□ -1.58
PTPRC-205ENST00000391970 MARK1Q9P0L2 795 aa5.21□□□□□ -1.58
PTPRC-205ENST00000391970 CNTN3Q9P232 1028 aa5.21□□□□□ -1.58
PTPRC-205ENST00000391970 SASH3O75995 380 aa5.2□□□□□ -1.58
PTPRC-205ENST00000391970 CD33P20138 364 aa5.2□□□□□ -1.58
PTPRC-205ENST00000391970 GNA15P30679 374 aa5.2□□□□□ -1.58
PTPRC-205ENST00000391970 DAB2P98082 770 aa5.2□□□□□ -1.58
PTPRC-205ENST00000391970 SPEM2Q0P670 501 aa5.2□□□□□ -1.58
PTPRC-205ENST00000391970 C1orf127Q8N9H9 656 aa5.2□□□□□ -1.58
PTPRC-205ENST00000391970 FAM161BQ96MY7 647 aa5.2□□□□□ -1.58
PTPRC-205ENST00000391970 PHF24Q9UPV7 400 aa5.2□□□□□ -1.58
PTPRC-205ENST00000391970 EREGO14944 169 aa5.19□□□□□ -1.58
PTPRC-205ENST00000391970 MMP20O60882 483 aa5.19□□□□□ -1.58
PTPRC-205ENST00000391970 RARAP10276 462 aa5.19□□□□□ -1.58
PTPRC-205ENST00000391970 FGFR3P22607 806 aa5.19□□□□□ -1.58
PTPRC-205ENST00000391970 TARSP26639 723 aaKnown RBP5.19□□□□□ -1.58
PTPRC-205ENST00000391970 VEGFBP49765 207 aa5.19□□□□□ -1.58
PTPRC-205ENST00000391970 PSMD2Q13200 908 aa5.19□□□□□ -1.58
PTPRC-205ENST00000391970 FAM182BQ5T319 152 aa5.19□□□□□ -1.58
PTPRC-205ENST00000391970 TTC39BQ5VTQ0 682 aaPredicted RBP5.19□□□□□ -1.58
PTPRC-205ENST00000391970 KRT25Q7Z3Z0 450 aa5.19□□□□□ -1.58
PTPRC-205ENST00000391970 NANOS1Q8WY41 292 aaKnown RBP5.19□□□□□ -1.58
PTPRC-205ENST00000391970 CCDC74AQ96AQ1 378 aa5.19□□□□□ -1.58
PTPRC-205ENST00000391970 FRMD6Q96NE9 622 aa5.19□□□□□ -1.58
PTPRC-205ENST00000391970 SLC30A3Q99726 388 aa5.19□□□□□ -1.58
PTPRC-205ENST00000391970 EFCC1Q9HA90 598 aa5.19□□□□□ -1.58
PTPRC-205ENST00000391970 ZFATQ9P243 1243 aa5.19□□□□□ -1.58
PTPRC-205ENST00000391970 CDC14CA4D256 554 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 GPR25O00155 361 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 SORBS3O60504 671 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 CYP2E1P05181 493 aaPredicted RBP5.18□□□□□ -1.58
PTPRC-205ENST00000391970 POLR3DP05423 398 aaPredicted RBP5.18□□□□□ -1.58
PTPRC-205ENST00000391970 NFKB1P19838 968 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 CES1P23141 567 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 IRS1P35568 1242 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 ITGAEP38570 1179 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.18□□□□□ -1.58
PTPRC-205ENST00000391970 FOXR1Q6PIV2 292 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 PI16Q6UXB8 463 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 GALNT12Q8IXK2 581 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 VWA5B2Q8N398 1253 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 OR13H1Q8NG92 308 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 PMEPA1Q969W9 287 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 ZNF775Q96BV0 537 aaPredicted RBP5.18□□□□□ -1.58
PTPRC-205ENST00000391970 TRERF1Q96PN7 1200 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 PNMA5Q96PV4 448 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 MRS2Q9HD23 443 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 NPHS2Q9NP85 383 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 SPG7Q9UQ90 795 aa5.18□□□□□ -1.58
PTPRC-205ENST00000391970 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.18□□□□□ -1.58
PTPRC-205ENST00000391970 MAP3K6O95382 1288 aa5.17□□□□□ -1.58
PTPRC-205ENST00000391970 HOXD8P13378 290 aaPredicted RBP5.17□□□□□ -1.58
PTPRC-205ENST00000391970 SOX18P35713 384 aa5.17□□□□□ -1.58
PTPRC-205ENST00000391970 TSNAXIP1Q2TAA8 658 aa5.17□□□□□ -1.58
PTPRC-205ENST00000391970 LDLRAD1Q5T700 205 aa5.17□□□□□ -1.58
PTPRC-205ENST00000391970 SV2AQ7L0J3 742 aa5.17□□□□□ -1.58
PTPRC-205ENST00000391970 RAB44Q7Z6P3 723 aaPredicted RBP5.17□□□□□ -1.58
PTPRC-205ENST00000391970 EPS8L3Q8TE67 593 aaKnown RBP5.17□□□□□ -1.58
PTPRC-205ENST00000391970 BHMTQ93088 406 aa5.17□□□□□ -1.58
PTPRC-205ENST00000391970 BACH2Q9BYV9 841 aa5.17□□□□□ -1.58
PTPRC-205ENST00000391970 TLR7Q9NYK1 1049 aaKnown RBP5.17□□□□□ -1.58
PTPRC-205ENST00000391970 KANSL3Q9P2N6 904 aa5.17□□□□□ -1.58
PTPRC-205ENST00000391970 VTI1BQ9UEU0 232 aa5.17□□□□□ -1.58
PTPRC-205ENST00000391970 AK5Q9Y6K8 562 aa5.17□□□□□ -1.58
PTPRC-205ENST00000391970 PHF20L1A8MW92 1017 aa5.16□□□□□ -1.58
PTPRC-205ENST00000391970 KIF4AO95239 1232 aa5.16□□□□□ -1.58
PTPRC-205ENST00000391970 PSAPP07602 524 aa5.16□□□□□ -1.58
PTPRC-205ENST00000391970 TCF3P15923 654 aa5.16□□□□□ -1.58
PTPRC-205ENST00000391970 CTBSQ01459 385 aa5.16□□□□□ -1.58
PTPRC-205ENST00000391970 NEUROD1Q13562 356 aa5.16□□□□□ -1.58
PTPRC-205ENST00000391970 NLRP2Q9NX02 1062 aa5.16□□□□□ -1.58
PTPRC-205ENST00000391970 SALL4Q9UJQ4 1053 aa5.16□□□□□ -1.58
PTPRC-205ENST00000391970 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.16□□□□□ -1.58
PTPRC-205ENST00000391970 C2CD2LO14523 706 aa5.15□□□□□ -1.59
PTPRC-205ENST00000391970 GIPC1O14908 333 aa5.15□□□□□ -1.59
PTPRC-205ENST00000391970 EDN3P14138 238 aa5.15□□□□□ -1.59
PTPRC-205ENST00000391970 PLAURQ03405 335 aa5.15□□□□□ -1.59
PTPRC-205ENST00000391970 PEAR1Q5VY43 1037 aaPredicted RBP5.15□□□□□ -1.59
PTPRC-205ENST00000391970 DHX32Q7L7V1 743 aaKnown RBP5.15□□□□□ -1.59
PTPRC-205ENST00000391970 CRELD1Q96HD1 420 aa5.15□□□□□ -1.59
PTPRC-205ENST00000391970 OSBPL7Q9BZF2 842 aa5.15□□□□□ -1.59
PTPRC-205ENST00000391970 SUV39H2Q9H5I1 410 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms