RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ORC3Q9UBD5 711 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-204ENST00000391814 RASAL2Q9UJF2 1139 aa18.44■□□□□ 0.54
SHANK1-204ENST00000391814 MRPS27Q92552 414 aaKnown RBP18.44■□□□□ 0.54
SHANK1-204ENST00000391814 KRT13P13646 458 aa18.43■□□□□ 0.54
SHANK1-204ENST00000391814 NAPBQ9H115 298 aa18.43■□□□□ 0.54
SHANK1-204ENST00000391814 AKR1B10O60218 316 aa18.43■□□□□ 0.54
SHANK1-204ENST00000391814 TMEM266Q2M3C6 531 aa18.43■□□□□ 0.54
SHANK1-204ENST00000391814 PCDHB15Q9Y5E8 787 aa18.43■□□□□ 0.54
SHANK1-204ENST00000391814 INPP5BP32019 993 aa18.43■□□□□ 0.54
SHANK1-204ENST00000391814 STMN4Q9H169 189 aaPredicted RBP18.43■□□□□ 0.54
SHANK1-204ENST00000391814 TACC1O75410 805 aa18.43■□□□□ 0.54
SHANK1-204ENST00000391814 TCERG1LQ5VWI1 586 aa18.43■□□□□ 0.54
SHANK1-204ENST00000391814 CFAP57Q96MR6 1250 aa18.43■□□□□ 0.54
SHANK1-204ENST00000391814 MYD88Q99836 296 aa18.43■□□□□ 0.54
SHANK1-204ENST00000391814 SLC26A6Q9BXS9 759 aa18.43■□□□□ 0.54
SHANK1-204ENST00000391814 SAMD15Q9P1V8 674 aa18.43■□□□□ 0.54
SHANK1-204ENST00000391814 HDAC1Q13547 482 aaPredicted RBP18.43■□□□□ 0.54
SHANK1-204ENST00000391814 C9orf84Q5VXU9 1444 aa18.42■□□□□ 0.54
SHANK1-204ENST00000391814 OAS2P29728 719 aaKnown RBP18.42■□□□□ 0.54
SHANK1-204ENST00000391814 ATP11AP98196 1134 aa18.42■□□□□ 0.54
SHANK1-204ENST00000391814 MARCKSP29966 332 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-204ENST00000391814 METTL24Q5JXM2 366 aa18.42■□□□□ 0.54
SHANK1-204ENST00000391814 PRC1O43663 620 aa18.42■□□□□ 0.54
SHANK1-204ENST00000391814 METAP2P50579 478 aaKnown RBP eCLIP18.42■□□□□ 0.54
SHANK1-204ENST00000391814 LRRC2Q9BYS8 371 aa18.42■□□□□ 0.54
SHANK1-204ENST00000391814 EXOC1Q9NV70 894 aa18.42■□□□□ 0.54
SHANK1-204ENST00000391814 TATP17735 454 aaPredicted RBP18.41■□□□□ 0.54
SHANK1-204ENST00000391814 LACTBP83111 547 aaPredicted RBP18.41■□□□□ 0.54
SHANK1-204ENST00000391814 B4GALNT4Q76KP1 1039 aa18.41■□□□□ 0.54
SHANK1-204ENST00000391814 IKBKGQ9Y6K9 419 aa18.41■□□□□ 0.54
SHANK1-204ENST00000391814 RANBP6O60518 1105 aaKnown RBP18.41■□□□□ 0.54
SHANK1-204ENST00000391814 UBLCP1Q8WVY7 318 aaPredicted RBP18.41■□□□□ 0.54
SHANK1-204ENST00000391814 DAPK1P53355 1430 aa18.41■□□□□ 0.54
SHANK1-204ENST00000391814 HAND2P61296 217 aa18.41■□□□□ 0.54
SHANK1-204ENST00000391814 POTEDQ86YR6 584 aa18.41■□□□□ 0.54
SHANK1-204ENST00000391814 CALML4Q96GE6 196 aa18.41■□□□□ 0.54
SHANK1-204ENST00000391814 SEC62Q99442 399 aaKnown RBP18.41■□□□□ 0.54
SHANK1-204ENST00000391814 GOLIM4O00461 696 aa18.41■□□□□ 0.54
SHANK1-204ENST00000391814 TXNDC2Q86VQ3 553 aa18.41■□□□□ 0.54
SHANK1-204ENST00000391814 AMPD3Q01432 767 aa18.4■□□□□ 0.54
SHANK1-204ENST00000391814 A0A087WZG4 1122 aa18.4■□□□□ 0.54
SHANK1-204ENST00000391814 TMEM110-MUSTN1A8MSY1 372 aa18.4■□□□□ 0.54
SHANK1-204ENST00000391814 IARSP41252 1262 aaKnown RBP18.4■□□□□ 0.54
SHANK1-204ENST00000391814 ESYT1Q9BSJ8 1104 aa18.4■□□□□ 0.54
SHANK1-204ENST00000391814 ABCC11Q96J66 1382 aa18.4■□□□□ 0.54
SHANK1-204ENST00000391814 CCDC194A0A1B0GVG4 234 aa18.4■□□□□ 0.54
SHANK1-204ENST00000391814 HPDP32754 393 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-204ENST00000391814 TSC1Q92574 1164 aa18.4■□□□□ 0.54
SHANK1-204ENST00000391814 KCNK9Q9NPC2 374 aa18.4■□□□□ 0.54
SHANK1-204ENST00000391814 RMND1Q9NWS8 449 aa18.4■□□□□ 0.54
SHANK1-204ENST00000391814 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.54
SHANK1-204ENST00000391814 TMEM67Q5HYA8 995 aa18.39■□□□□ 0.53
SHANK1-204ENST00000391814 ABCF2Q9UG63 623 aa18.39■□□□□ 0.53
SHANK1-204ENST00000391814 ZSCAN29Q8IWY8 852 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-204ENST00000391814 KCNG4Q8TDN1 519 aa18.39■□□□□ 0.53
SHANK1-204ENST00000391814 AKAP2Q9Y2D5 859 aa18.39■□□□□ 0.53
SHANK1-204ENST00000391814 FERP16591 822 aa18.39■□□□□ 0.53
SHANK1-204ENST00000391814 TCEANC2Q96MN5 208 aa18.39■□□□□ 0.53
SHANK1-204ENST00000391814 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.53
SHANK1-204ENST00000391814 PPARDQ03181 441 aa18.39■□□□□ 0.53
SHANK1-204ENST00000391814 TAF7Q15545 349 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-204ENST00000391814 CERS3Q8IU89 383 aa18.39■□□□□ 0.53
SHANK1-204ENST00000391814 C16orf71Q8IYS4 520 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-204ENST00000391814 MYCNP04198 464 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-204ENST00000391814 PCK1P35558 622 aa18.39■□□□□ 0.53
SHANK1-204ENST00000391814 MAP2K2P36507 400 aa18.39■□□□□ 0.53
SHANK1-204ENST00000391814 ZBTB16Q05516 673 aa18.39■□□□□ 0.53
SHANK1-204ENST00000391814 DDX46Q7L014 1031 aaKnown RBP18.39■□□□□ 0.53
SHANK1-204ENST00000391814 PTPRCP08575 1304 aa18.38■□□□□ 0.53
SHANK1-204ENST00000391814 MICU3Q86XE3 530 aa18.38■□□□□ 0.53
SHANK1-204ENST00000391814 KRT83P78385 493 aa18.38■□□□□ 0.53
SHANK1-204ENST00000391814 BCL2L12Q9HB09 334 aa18.38■□□□□ 0.53
SHANK1-204ENST00000391814 Q6ZUG5 572 aa18.38■□□□□ 0.53
SHANK1-204ENST00000391814 TTC14Q96N46 770 aa18.38■□□□□ 0.53
SHANK1-204ENST00000391814 RTEL1-TNFRSF6BF6WH68 1400 aa18.38■□□□□ 0.53
SHANK1-204ENST00000391814 HMG20BQ9P0W2 317 aa18.38■□□□□ 0.53
SHANK1-204ENST00000391814 IDEP14735 1019 aa18.37■□□□□ 0.53
SHANK1-204ENST00000391814 GBP1P32455 592 aa18.37■□□□□ 0.53
SHANK1-204ENST00000391814 TUBB4BP68371 445 aa18.37■□□□□ 0.53
SHANK1-204ENST00000391814 UBXN1Q04323 297 aa18.37■□□□□ 0.53
SHANK1-204ENST00000391814 ESCO1Q5FWF5 840 aa18.37■□□□□ 0.53
SHANK1-204ENST00000391814 MIPOL1Q8TD10 442 aa18.37■□□□□ 0.53
SHANK1-204ENST00000391814 SMC6Q96SB8 1091 aa18.37■□□□□ 0.53
SHANK1-204ENST00000391814 RAB34Q9BZG1 259 aa18.37■□□□□ 0.53
SHANK1-204ENST00000391814 KRT86O43790 486 aa18.37■□□□□ 0.53
SHANK1-204ENST00000391814 DDX23Q9BUQ8 820 aaKnown RBP18.37■□□□□ 0.53
SHANK1-204ENST00000391814 CARD6Q9BX69 1037 aa18.37■□□□□ 0.53
SHANK1-204ENST00000391814 COMMD10Q9Y6G5 202 aa18.37■□□□□ 0.53
SHANK1-204ENST00000391814 RPGRIP1LQ68CZ1 1315 aa18.37■□□□□ 0.53
SHANK1-204ENST00000391814 NOL3O60936 208 aaKnown RBP18.37■□□□□ 0.53
SHANK1-204ENST00000391814 CATIPQ7Z7H3 387 aa18.37■□□□□ 0.53
SHANK1-204ENST00000391814 BAG1Q99933 345 aaPredicted RBP18.37■□□□□ 0.53
SHANK1-204ENST00000391814 GAPVD1Q14C86 1478 aa18.36■□□□□ 0.53
SHANK1-204ENST00000391814 LMNTD2Q8IXW0 634 aa18.36■□□□□ 0.53
SHANK1-204ENST00000391814 CFAP58Q5T655 872 aa18.36■□□□□ 0.53
SHANK1-204ENST00000391814 PYM1Q9BRP8 204 aaKnown RBP18.36■□□□□ 0.53
SHANK1-204ENST00000391814 IQCGQ9H095 443 aaKnown RBP18.36■□□□□ 0.53
SHANK1-204ENST00000391814 GOLGA6CA6NDK9 693 aa18.36■□□□□ 0.53
SHANK1-204ENST00000391814 GOLGA6DP0CG33 693 aa18.36■□□□□ 0.53
SHANK1-204ENST00000391814 BRF1Q92994 677 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms