RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 GSX2Q9BZM3 304 aa7.55□□□□□ -1.2
RNU6-549P-201ENST00000384433 NDFIP2Q9NV92 336 aa7.55□□□□□ -1.2
RNU6-549P-201ENST00000384433 ZFATQ9P243 1243 aa7.55□□□□□ -1.2
RNU6-549P-201ENST00000384433 FNDC3AQ9Y2H6 1198 aaKnown RBP7.55□□□□□ -1.2
RNU6-549P-201ENST00000384433 PCDHGC4Q9Y5F7 938 aa7.55□□□□□ -1.2
RNU6-549P-201ENST00000384433 POTECB2RU33 542 aa7.54□□□□□ -1.2
RNU6-549P-201ENST00000384433 PHACTR2O75167 634 aa7.54□□□□□ -1.2
RNU6-549P-201ENST00000384433 EGFRP00533 1210 aa7.54□□□□□ -1.2
RNU6-549P-201ENST00000384433 FAM157BP0CG42 384 aa7.54□□□□□ -1.2
RNU6-549P-201ENST00000384433 KCNQ4P56696 695 aa7.54□□□□□ -1.2
RNU6-549P-201ENST00000384433 C9orf131Q5VYM1 1079 aa7.54□□□□□ -1.2
RNU6-549P-201ENST00000384433 ALG1LQ6GMV1 187 aa7.54□□□□□ -1.2
RNU6-549P-201ENST00000384433 RAB44Q7Z6P3 723 aaPredicted RBP7.54□□□□□ -1.2
RNU6-549P-201ENST00000384433 GTPBP3Q969Y2 492 aaKnown RBP7.54□□□□□ -1.2
RNU6-549P-201ENST00000384433 CCDC74AQ96AQ1 378 aa7.54□□□□□ -1.2
RNU6-549P-201ENST00000384433 SLC30A3Q99726 388 aa7.54□□□□□ -1.2
RNU6-549P-201ENST00000384433 IRX2Q9BZI1 471 aaPredicted RBP7.54□□□□□ -1.2
RNU6-549P-201ENST00000384433 DNAJC25Q9H1X3 360 aa7.54□□□□□ -1.2
RNU6-549P-201ENST00000384433 CTSHP09668 335 aa7.53□□□□□ -1.2
RNU6-549P-201ENST00000384433 TCF3P15923 654 aa7.53□□□□□ -1.2
RNU6-549P-201ENST00000384433 EPB42P16452 691 aa7.53□□□□□ -1.2
RNU6-549P-201ENST00000384433 CD33P20138 364 aa7.53□□□□□ -1.2
RNU6-549P-201ENST00000384433 NLRP13Q86W25 1043 aa7.53□□□□□ -1.2
RNU6-549P-201ENST00000384433 TRIM22Q8IYM9 498 aa7.53□□□□□ -1.2
RNU6-549P-201ENST00000384433 SNX29Q8TEQ0 813 aa7.53□□□□□ -1.2
RNU6-549P-201ENST00000384433 ZNF837Q96EG3 531 aaPredicted RBP7.53□□□□□ -1.2
RNU6-549P-201ENST00000384433 OSBPL7Q9BZF2 842 aa7.53□□□□□ -1.2
RNU6-549P-201ENST00000384433 GPR25O00155 361 aa7.52□□□□□ -1.21
RNU6-549P-201ENST00000384433 SORBS3O60504 671 aa7.52□□□□□ -1.21
RNU6-549P-201ENST00000384433 MMP20O60882 483 aa7.52□□□□□ -1.21
RNU6-549P-201ENST00000384433 ITGA6P23229 1130 aa7.52□□□□□ -1.21
RNU6-549P-201ENST00000384433 GNA15P30679 374 aa7.52□□□□□ -1.21
RNU6-549P-201ENST00000384433 CCINQ13939 588 aa7.52□□□□□ -1.21
RNU6-549P-201ENST00000384433 LATS2Q9NRM7 1088 aa7.52□□□□□ -1.21
RNU6-549P-201ENST00000384433 ABI2Q9NYB9 513 aaPredicted RBP7.52□□□□□ -1.21
RNU6-549P-201ENST00000384433 KANSL3Q9P2N6 904 aa7.52□□□□□ -1.21
RNU6-549P-201ENST00000384433 VTI1BQ9UEU0 232 aa7.52□□□□□ -1.21
RNU6-549P-201ENST00000384433 NEFLP07196 543 aa7.51□□□□□ -1.21
RNU6-549P-201ENST00000384433 LBRQ14739 615 aaKnown RBP7.51□□□□□ -1.21
RNU6-549P-201ENST00000384433 COL13A1Q5TAT6 717 aaPredicted RBP7.51□□□□□ -1.21
RNU6-549P-201ENST00000384433 FIGNL1Q6PIW4 674 aa7.51□□□□□ -1.21
RNU6-549P-201ENST00000384433 SENP2Q9HC62 589 aa7.51□□□□□ -1.21
RNU6-549P-201ENST00000384433 MRS2Q9HD23 443 aa7.51□□□□□ -1.21
RNU6-549P-201ENST00000384433 NPHS2Q9NP85 383 aa7.51□□□□□ -1.21
RNU6-549P-201ENST00000384433 AK5Q9Y6K8 562 aa7.51□□□□□ -1.21
RNU6-549P-201ENST00000384433 ACPPP15309 386 aa7.5□□□□□ -1.21
RNU6-549P-201ENST00000384433 HDLBPQ00341 1268 aaKnown RBP7.5□□□□□ -1.21
RNU6-549P-201ENST00000384433 CTBSQ01459 385 aa7.5□□□□□ -1.21
RNU6-549P-201ENST00000384433 TTC39BQ5VTQ0 682 aaPredicted RBP7.5□□□□□ -1.21
RNU6-549P-201ENST00000384433 TMEM87AQ8NBN3 555 aa7.5□□□□□ -1.21
RNU6-549P-201ENST00000384433 FBF1Q8TES7 1133 aa7.5□□□□□ -1.21
RNU6-549P-201ENST00000384433 KIFC2Q96AC6 838 aa7.5□□□□□ -1.21
RNU6-549P-201ENST00000384433 MARK1Q9P0L2 795 aa7.5□□□□□ -1.21
RNU6-549P-201ENST00000384433 H7C1W4 665 aa7.49□□□□□ -1.21
RNU6-549P-201ENST00000384433 PPFIA3O75145 1194 aa7.49□□□□□ -1.21
RNU6-549P-201ENST00000384433 NFKB1P19838 968 aa7.49□□□□□ -1.21
RNU6-549P-201ENST00000384433 CES1P23141 567 aa7.49□□□□□ -1.21
RNU6-549P-201ENST00000384433 SPEM2Q0P670 501 aa7.49□□□□□ -1.21
RNU6-549P-201ENST00000384433 GALNT12Q8IXK2 581 aa7.49□□□□□ -1.21
RNU6-549P-201ENST00000384433 VWA5B2Q8N398 1253 aa7.49□□□□□ -1.21
RNU6-549P-201ENST00000384433 IGSF3O75054 1194 aa7.48□□□□□ -1.21
RNU6-549P-201ENST00000384433 TRPA1O75762 1119 aa7.48□□□□□ -1.21
RNU6-549P-201ENST00000384433 RARAP10276 462 aa7.48□□□□□ -1.21
RNU6-549P-201ENST00000384433 PEAR1Q5VY43 1037 aaPredicted RBP7.48□□□□□ -1.21
RNU6-549P-201ENST00000384433 NXPE4Q6UWF7 544 aa7.48□□□□□ -1.21
RNU6-549P-201ENST00000384433 BHMTQ93088 406 aa7.48□□□□□ -1.21
RNU6-549P-201ENST00000384433 CDC14CA4D256 554 aa7.47□□□□□ -1.21
RNU6-549P-201ENST00000384433 C11orf95C9JLR9 678 aaPredicted RBP7.47□□□□□ -1.21
RNU6-549P-201ENST00000384433 C2CD2LO14523 706 aa7.47□□□□□ -1.21
RNU6-549P-201ENST00000384433 VEGFBP49765 207 aa7.47□□□□□ -1.21
RNU6-549P-201ENST00000384433 FGD1P98174 961 aa7.47□□□□□ -1.21
RNU6-549P-201ENST00000384433 Q6ZNB5 142 aa7.47□□□□□ -1.21
RNU6-549P-201ENST00000384433 METTL16Q86W50 562 aaKnown RBP7.47□□□□□ -1.21
RNU6-549P-201ENST00000384433 OR13H1Q8NG92 308 aa7.47□□□□□ -1.21
RNU6-549P-201ENST00000384433 BCO2Q9BYV7 579 aa7.47□□□□□ -1.21
RNU6-549P-201ENST00000384433 C12orf49Q9H741 205 aa7.47□□□□□ -1.21
RNU6-549P-201ENST00000384433 C11orf16Q9NQ32 467 aa7.47□□□□□ -1.21
RNU6-549P-201ENST00000384433 SALL4Q9UJQ4 1053 aa7.47□□□□□ -1.21
RNU6-549P-201ENST00000384433 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.47□□□□□ -1.21
RNU6-549P-201ENST00000384433 A0A1W2PP55 124 aa7.46□□□□□ -1.22
RNU6-549P-201ENST00000384433 SCAMP3O14828 347 aaKnown RBP7.46□□□□□ -1.22
RNU6-549P-201ENST00000384433 GADD45BO75293 160 aaPredicted RBP7.46□□□□□ -1.22
RNU6-549P-201ENST00000384433 FGFR3P22607 806 aa7.46□□□□□ -1.22
RNU6-549P-201ENST00000384433 EIF4BP23588 611 aaKnown RBP7.46□□□□□ -1.22
RNU6-549P-201ENST00000384433 FANCCQ00597 558 aa7.46□□□□□ -1.22
RNU6-549P-201ENST00000384433 LAMC2Q13753 1193 aa7.46□□□□□ -1.22
RNU6-549P-201ENST00000384433 GRM2Q14416 872 aa7.46□□□□□ -1.22
RNU6-549P-201ENST00000384433 NLRP2Q9NX02 1062 aa7.46□□□□□ -1.22
RNU6-549P-201ENST00000384433 SPG7Q9UQ90 795 aa7.46□□□□□ -1.22
RNU6-549P-201ENST00000384433 ZBTB42B2RXF5 422 aa7.45□□□□□ -1.22
RNU6-549P-201ENST00000384433 MEI1Q5TIA1 1274 aa7.45□□□□□ -1.22
RNU6-549P-201ENST00000384433 GLIS3Q8NEA6 775 aa7.45□□□□□ -1.22
RNU6-549P-201ENST00000384433 CNTNAP3BQ96NU0 1288 aa7.45□□□□□ -1.22
RNU6-549P-201ENST00000384433 PNMA5Q96PV4 448 aa7.45□□□□□ -1.22
RNU6-549P-201ENST00000384433 CNTNAP3Q9BZ76 1288 aa7.45□□□□□ -1.22
RNU6-549P-201ENST00000384433 TLR7Q9NYK1 1049 aaKnown RBP7.45□□□□□ -1.22
RNU6-549P-201ENST00000384433 ATXN7L1Q9ULK2 861 aaPredicted RBP7.45□□□□□ -1.22
RNU6-549P-201ENST00000384433 MLLT1Q03111 559 aaPredicted RBP7.44□□□□□ -1.22
RNU6-549P-201ENST00000384433 RAD51AP2Q09MP3 1159 aa7.44□□□□□ -1.22
RNU6-549P-201ENST00000384433 FRMD6Q96NE9 622 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms