RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 OSBPL3Q9H4L5 887 aa30.23■■■□□ 2.43
ECHDC3-201ENST00000379215 ANKRD18BA2A2Z9 1011 aa30.22■■■□□ 2.43
ECHDC3-201ENST00000379215 TAF7LQ5H9L4 462 aa30.22■■■□□ 2.43
ECHDC3-201ENST00000379215 RTL9Q8NET4 1388 aa30.22■■■□□ 2.43
ECHDC3-201ENST00000379215 GYS1P13807 737 aa30.22■■■□□ 2.43
ECHDC3-201ENST00000379215 IL15P40933 162 aaPredicted RBP30.22■■■□□ 2.43
ECHDC3-201ENST00000379215 CCDC152Q4G0S7 254 aa30.22■■■□□ 2.43
ECHDC3-201ENST00000379215 KLHDC4Q8TBB5 520 aa30.22■■■□□ 2.43
ECHDC3-201ENST00000379215 IL1RAPL2Q9NP60 686 aa30.22■■■□□ 2.43
ECHDC3-201ENST00000379215 AOX1Q06278 1338 aa30.22■■■□□ 2.43
ECHDC3-201ENST00000379215 SLC10A5Q5PT55 438 aa30.21■■■□□ 2.43
ECHDC3-201ENST00000379215 C16orf71Q8IYS4 520 aaPredicted RBP30.21■■■□□ 2.43
ECHDC3-201ENST00000379215 SALL3Q9BXA9 1300 aa30.2■■■□□ 2.43
ECHDC3-201ENST00000379215 EYA2O00167 538 aa30.2■■■□□ 2.43
ECHDC3-201ENST00000379215 HCLS1P14317 486 aaPredicted RBP30.2■■■□□ 2.43
ECHDC3-201ENST00000379215 MX1P20591 662 aa30.2■■■□□ 2.43
ECHDC3-201ENST00000379215 EN1Q05925 392 aaPredicted RBP30.2■■■□□ 2.43
ECHDC3-201ENST00000379215 SASH1O94885 1247 aa30.19■■■□□ 2.42
ECHDC3-201ENST00000379215 ITGA6P23229 1130 aa30.19■■■□□ 2.42
ECHDC3-201ENST00000379215 EZH2Q15910 746 aaKnown RBP30.19■■■□□ 2.42
ECHDC3-201ENST00000379215 NUTM1Q86Y26 1132 aa30.19■■■□□ 2.42
ECHDC3-201ENST00000379215 GREM2Q9H772 168 aa30.19■■■□□ 2.42
ECHDC3-201ENST00000379215 STAP2Q9UGK3 403 aa30.19■■■□□ 2.42
ECHDC3-201ENST00000379215 DDX60Q8IY21 1712 aaKnown RBP30.19■■■□□ 2.42
ECHDC3-201ENST00000379215 PDE1AP54750 535 aa30.18■■■□□ 2.42
ECHDC3-201ENST00000379215 NFIXQ14938 502 aa30.18■■■□□ 2.42
ECHDC3-201ENST00000379215 GPATCH3Q96I76 525 aa30.18■■■□□ 2.42
ECHDC3-201ENST00000379215 ERFEQ4G0M1 354 aa30.18■■■□□ 2.42
ECHDC3-201ENST00000379215 BACH2Q9BYV9 841 aa30.18■■■□□ 2.42
ECHDC3-201ENST00000379215 BCL11AQ9H165 835 aa30.18■■■□□ 2.42
ECHDC3-201ENST00000379215 TTC22Q5TAA0 569 aa30.17■■■□□ 2.42
ECHDC3-201ENST00000379215 OTUD7AQ8TE49 926 aaPredicted RBP30.17■■■□□ 2.42
ECHDC3-201ENST00000379215 STK32BQ9NY57 414 aa30.17■■■□□ 2.42
ECHDC3-201ENST00000379215 IFIT2P09913 472 aaKnown RBP30.16■■■□□ 2.42
ECHDC3-201ENST00000379215 NPHP1O15259 732 aa30.15■■■□□ 2.42
ECHDC3-201ENST00000379215 SF3B3Q15393 1217 aaKnown RBP30.15■■■□□ 2.42
ECHDC3-201ENST00000379215 NLGN1Q8N2Q7 840 aa30.15■■■□□ 2.42
ECHDC3-201ENST00000379215 GPR108Q9NPR9 543 aa30.15■■■□□ 2.42
ECHDC3-201ENST00000379215 TTC41PQ6P2S7 1318 aa30.15■■■□□ 2.42
ECHDC3-201ENST00000379215 RIC1Q4ADV7 1423 aa30.14■■■□□ 2.42
ECHDC3-201ENST00000379215 CCDC85AQ96PX6 553 aaPredicted RBP30.14■■■□□ 2.42
ECHDC3-201ENST00000379215 TSHZ2Q9NRE2 1034 aa30.14■■■□□ 2.42
ECHDC3-201ENST00000379215 ATG9AQ7Z3C6 839 aa30.14■■■□□ 2.41
ECHDC3-201ENST00000379215 AACSQ86V21 672 aa30.14■■■□□ 2.41
ECHDC3-201ENST00000379215 CNBD1Q8NA66 436 aa30.14■■■□□ 2.41
ECHDC3-201ENST00000379215 SLC15A2Q16348 729 aa30.13■■■□□ 2.41
ECHDC3-201ENST00000379215 C8orf34Q49A92 452 aa30.13■■■□□ 2.41
ECHDC3-201ENST00000379215 COL23A1Q86Y22 540 aaPredicted RBP30.13■■■□□ 2.41
ECHDC3-201ENST00000379215 ZNF594Q96JF6 807 aaPredicted RBP30.13■■■□□ 2.41
ECHDC3-201ENST00000379215 NLRP3Q96P20 1036 aa30.13■■■□□ 2.41
ECHDC3-201ENST00000379215 TM4SF1P30408 202 aa30.12■■■□□ 2.41
ECHDC3-201ENST00000379215 ABCC12Q96J65 1359 aa30.12■■■□□ 2.41
ECHDC3-201ENST00000379215 PNPLA7Q6ZV29 1317 aa30.12■■■□□ 2.41
ECHDC3-201ENST00000379215 LRP5O75197 1615 aa30.12■■■□□ 2.41
ECHDC3-201ENST00000379215 MSH5O43196 834 aa30.11■■■□□ 2.41
ECHDC3-201ENST00000379215 TFCP2Q12800 502 aa30.11■■■□□ 2.41
ECHDC3-201ENST00000379215 CDC5LQ99459 802 aaKnown RBP30.11■■■□□ 2.41
ECHDC3-201ENST00000379215 TUBGCP6Q96RT7 1819 aa30.11■■■□□ 2.41
ECHDC3-201ENST00000379215 ERC2O15083 957 aa30.11■■■□□ 2.41
ECHDC3-201ENST00000379215 LDHAL6AQ6ZMR3 332 aa30.11■■■□□ 2.41
ECHDC3-201ENST00000379215 CEP126Q9P2H0 1117 aa30.11■■■□□ 2.41
ECHDC3-201ENST00000379215 QSER1Q2KHR3 1735 aa30.1■■■□□ 2.41
ECHDC3-201ENST00000379215 ST5P78524 1137 aa30.1■■■□□ 2.41
ECHDC3-201ENST00000379215 TNNI3KQ59H18 835 aa30.1■■■□□ 2.41
ECHDC3-201ENST00000379215 FPGT-TNNI3KV9GXZ4 949 aa30.1■■■□□ 2.41
ECHDC3-201ENST00000379215 LRRC24Q50LG9 513 aa30.09■■■□□ 2.41
ECHDC3-201ENST00000379215 EAF2Q96CJ1 260 aaPredicted RBP30.09■■■□□ 2.41
ECHDC3-201ENST00000379215 CNNM1Q9NRU3 951 aa30.09■■■□□ 2.41
ECHDC3-201ENST00000379215 AKAP2Q9Y2D5 859 aa30.09■■■□□ 2.41
ECHDC3-201ENST00000379215 GSPT1P15170 499 aaKnown RBP30.08■■■□□ 2.41
ECHDC3-201ENST00000379215 IGHMBP2P38935 993 aaKnown RBP30.08■■■□□ 2.41
ECHDC3-201ENST00000379215 ECHDC1Q9NTX5 307 aa30.08■■■□□ 2.41
ECHDC3-201ENST00000379215 EIF5BO60841 1220 aaKnown RBP30.07■■■□□ 2.4
ECHDC3-201ENST00000379215 SERPINB2P05120 415 aa30.07■■■□□ 2.4
ECHDC3-201ENST00000379215 MPHOSPH8Q99549 860 aa30.07■■■□□ 2.4
ECHDC3-201ENST00000379215 GLRX3O76003 335 aaKnown RBP30.07■■■□□ 2.4
ECHDC3-201ENST00000379215 RIPOR2Q9Y4F9 1068 aa30.07■■■□□ 2.4
ECHDC3-201ENST00000379215 MROH5Q6ZUA9 1318 aa30.06■■■□□ 2.4
ECHDC3-201ENST00000379215 DEFB132Q7Z7B7 95 aa30.06■■■□□ 2.4
ECHDC3-201ENST00000379215 PUS3Q9BZE2 481 aaKnown RBP30.06■■■□□ 2.4
ECHDC3-201ENST00000379215 ANO8Q9HCE9 1232 aaPredicted RBP30.06■■■□□ 2.4
ECHDC3-201ENST00000379215 PRR5LQ6MZQ0 368 aa30.05■■■□□ 2.4
ECHDC3-201ENST00000379215 POLRMTO00411 1230 aaKnown RBP30.04■■■□□ 2.4
ECHDC3-201ENST00000379215 METTL24Q5JXM2 366 aa30.04■■■□□ 2.4
ECHDC3-201ENST00000379215 ZNF609O15014 1411 aa30.04■■■□□ 2.4
ECHDC3-201ENST00000379215 CDC45O75419 566 aa30.03■■■□□ 2.4
ECHDC3-201ENST00000379215 PI4K2BQ8TCG2 481 aa30.03■■■□□ 2.4
ECHDC3-201ENST00000379215 CCDC8Q9H0W5 538 aaPredicted RBP30.03■■■□□ 2.4
ECHDC3-201ENST00000379215 DDR1Q08345 913 aa30.02■■■□□ 2.4
ECHDC3-201ENST00000379215 ANKRD18AQ8IVF6 992 aa30.02■■■□□ 2.4
ECHDC3-201ENST00000379215 SEC31BQ9NQW1 1179 aa30.02■■■□□ 2.4
ECHDC3-201ENST00000379215 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.02■■■□□ 2.4
ECHDC3-201ENST00000379215 SDSP20132 328 aa30.01■■■□□ 2.39
ECHDC3-201ENST00000379215 CASC1Q6TDU7 716 aa30.01■■■□□ 2.39
ECHDC3-201ENST00000379215 TSHZ3Q63HK5 1081 aa30■■■□□ 2.39
ECHDC3-201ENST00000379215 C3orf67Q6ZVT6 689 aa30■■■□□ 2.39
ECHDC3-201ENST00000379215 DDX46Q7L014 1031 aaKnown RBP30■■■□□ 2.39
ECHDC3-201ENST00000379215 DBNLQ9UJU6 430 aaKnown RBP30■■■□□ 2.39
ECHDC3-201ENST00000379215 PARP3Q9Y6F1 533 aa29.99■■■□□ 2.39
ECHDC3-201ENST00000379215 A0A1B0GUL7 405 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms