RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 PNMA8AQ86V59 439 aaPredicted RBP17.91■□□□□ 0.46
PCNA-202ENST00000379160 NLRP10Q86W26 655 aa17.91■□□□□ 0.46
PCNA-202ENST00000379160 TMX4Q9H1E5 349 aaPredicted RBP17.91■□□□□ 0.46
PCNA-202ENST00000379160 DDX21Q9NR30 783 aaKnown RBP eCLIP17.91■□□□□ 0.46
PCNA-202ENST00000379160 CHPF2Q9P2E5 772 aa17.91■□□□□ 0.46
PCNA-202ENST00000379160 ABCC4O15439 1325 aa17.9■□□□□ 0.46
PCNA-202ENST00000379160 LAMB2P55268 1798 aa17.9■□□□□ 0.46
PCNA-202ENST00000379160 ADAMTSL1Q8N6G6 1762 aa17.9■□□□□ 0.46
PCNA-202ENST00000379160 TCIRG1Q13488 830 aa17.9■□□□□ 0.46
PCNA-202ENST00000379160 MAP1SQ66K74 1059 aaPredicted RBP17.9■□□□□ 0.46
PCNA-202ENST00000379160 TRMT112Q9UI30 125 aaKnown RBP17.9■□□□□ 0.46
PCNA-202ENST00000379160 ATP6V0A2Q9Y487 856 aa17.9■□□□□ 0.46
PCNA-202ENST00000379160 PPIP5K2O43314 1243 aa17.89■□□□□ 0.45
PCNA-202ENST00000379160 AOC3Q16853 763 aa17.89■□□□□ 0.45
PCNA-202ENST00000379160 HDGFL1Q5TGJ6 251 aa17.89■□□□□ 0.45
PCNA-202ENST00000379160 TMEM88BA6NKF7 163 aa17.88■□□□□ 0.45
PCNA-202ENST00000379160 LMOD1P29536 600 aaPredicted RBP17.88■□□□□ 0.45
PCNA-202ENST00000379160 NIM1KQ8IY84 436 aa17.88■□□□□ 0.45
PCNA-202ENST00000379160 CNTROBQ8N137 903 aa17.88■□□□□ 0.45
PCNA-202ENST00000379160 CNTNAP1P78357 1384 aa17.88■□□□□ 0.45
PCNA-202ENST00000379160 LTBP1Q14766 1721 aa17.87■□□□□ 0.45
PCNA-202ENST00000379160 SH3TC1Q8TE82 1336 aa17.86■□□□□ 0.45
PCNA-202ENST00000379160 TAF1P21675 1872 aa17.86■□□□□ 0.45
PCNA-202ENST00000379160 EPS15P42566 896 aa17.86■□□□□ 0.45
PCNA-202ENST00000379160 SCNN1DP51172 638 aa17.86■□□□□ 0.45
PCNA-202ENST00000379160 TNS4Q8IZW8 715 aa17.86■□□□□ 0.45
PCNA-202ENST00000379160 BBOX1O75936 387 aa17.85■□□□□ 0.45
PCNA-202ENST00000379160 DPP8Q6V1X1 898 aaPredicted RBP17.85■□□□□ 0.45
PCNA-202ENST00000379160 ANKRD13DQ6ZTN6 518 aa17.85■□□□□ 0.45
PCNA-202ENST00000379160 DDX46Q7L014 1031 aaKnown RBP17.85■□□□□ 0.45
PCNA-202ENST00000379160 PLBD2Q8NHP8 589 aa17.85■□□□□ 0.45
PCNA-202ENST00000379160 CFAP44Q96MT7 982 aa17.85■□□□□ 0.45
PCNA-202ENST00000379160 PRKRIP1Q9H875 184 aaPredicted RBP17.85■□□□□ 0.45
PCNA-202ENST00000379160 DBF4Q9UBU7 674 aaPredicted RBP17.85■□□□□ 0.45
PCNA-202ENST00000379160 HOXB7P09629 217 aa17.84■□□□□ 0.45
PCNA-202ENST00000379160 DUSP27Q5VZP5 1158 aa17.84■□□□□ 0.45
PCNA-202ENST00000379160 SP8Q8IXZ3 490 aa17.84■□□□□ 0.45
PCNA-202ENST00000379160 MPNDQ8N594 471 aa17.84■□□□□ 0.45
PCNA-202ENST00000379160 SUPT20HQ8NEM7 779 aa17.84■□□□□ 0.45
PCNA-202ENST00000379160 MBIPQ9NS73 344 aa17.84■□□□□ 0.45
PCNA-202ENST00000379160 ATP5J2-PTCD1G3V325 749 aa17.83■□□□□ 0.45
PCNA-202ENST00000379160 VEGFBP49765 207 aa17.83■□□□□ 0.45
PCNA-202ENST00000379160 GRAPQ13588 217 aa17.83■□□□□ 0.45
PCNA-202ENST00000379160 GRAPLQ8TC17 118 aaPredicted RBP17.83■□□□□ 0.45
PCNA-202ENST00000379160 RTFDC1Q9BY42 306 aaPredicted RBP17.83■□□□□ 0.45
PCNA-202ENST00000379160 VPS33BQ9H267 617 aa17.83■□□□□ 0.45
PCNA-202ENST00000379160 FAM89AQ96GI7 184 aa17.82■□□□□ 0.44
PCNA-202ENST00000379160 HYPKQ9NX55 129 aa17.82■□□□□ 0.44
PCNA-202ENST00000379160 ZNRF3Q9ULT6 936 aa17.82■□□□□ 0.44
PCNA-202ENST00000379160 DDX60Q8IY21 1712 aaKnown RBP17.82■□□□□ 0.44
PCNA-202ENST00000379160 APAF1O14727 1248 aa17.81■□□□□ 0.44
PCNA-202ENST00000379160 CXCL9Q07325 125 aa17.81■□□□□ 0.44
PCNA-202ENST00000379160 RTL5Q5HYW3 569 aaPredicted RBP17.81■□□□□ 0.44
PCNA-202ENST00000379160 IFNLR1Q8IU57 520 aaPredicted RBP17.81■□□□□ 0.44
PCNA-202ENST00000379160 ISCA1Q9BUE6 129 aa17.81■□□□□ 0.44
PCNA-202ENST00000379160 FMR1Q06787 632 aaKnown RBP eCLIP17.8■□□□□ 0.44
PCNA-202ENST00000379160 USP50Q70EL3 339 aaPredicted RBP17.8■□□□□ 0.44
PCNA-202ENST00000379160 GPRC5DQ9NZD1 345 aa17.8■□□□□ 0.44
PCNA-202ENST00000379160 ABT1Q9ULW3 272 aaKnown RBP17.8■□□□□ 0.44
PCNA-202ENST00000379160 ELL2O00472 640 aaPredicted RBP17.79■□□□□ 0.44
PCNA-202ENST00000379160 FOXN1O15353 648 aa17.79■□□□□ 0.44
PCNA-202ENST00000379160 ZNF853P0CG23 659 aa17.79■□□□□ 0.44
PCNA-202ENST00000379160 KIAA2012Q0VF49 1180 aa17.79■□□□□ 0.44
PCNA-202ENST00000379160 DEFB115Q30KQ5 88 aa17.79■□□□□ 0.44
PCNA-202ENST00000379160 FARP1Q9Y4F1 1045 aaPredicted RBP17.79■□□□□ 0.44
PCNA-202ENST00000379160 RASSF10A6NK89 507 aa17.79■□□□□ 0.44
PCNA-202ENST00000379160 RAD17O75943 681 aa17.79■□□□□ 0.44
PCNA-202ENST00000379160 GMPSP49915 693 aaPredicted RBP17.79■□□□□ 0.44
PCNA-202ENST00000379160 RIC3Q7Z5B4 369 aa17.79■□□□□ 0.44
PCNA-202ENST00000379160 ADARB2Q9NS39 739 aaKnown RBP17.79■□□□□ 0.44
PCNA-202ENST00000379160 TRAF5O00463 557 aa17.78■□□□□ 0.44
PCNA-202ENST00000379160 GNAI1P63096 354 aa17.78■□□□□ 0.44
PCNA-202ENST00000379160 CIAPIN1Q6FI81 312 aa17.78■□□□□ 0.44
PCNA-202ENST00000379160 TMC4Q7Z404 712 aa17.78■□□□□ 0.44
PCNA-202ENST00000379160 CELF1Q92879 486 aaKnown RBP17.78■□□□□ 0.44
PCNA-202ENST00000379160 PHAXQ9H814 394 aaKnown RBP17.78■□□□□ 0.44
PCNA-202ENST00000379160 IFT57Q9NWB7 429 aa17.78■□□□□ 0.44
PCNA-202ENST00000379160 DUOX1Q9NRD9 1551 aa17.77■□□□□ 0.43
PCNA-202ENST00000379160 IRS4O14654 1257 aaPredicted RBP17.77■□□□□ 0.43
PCNA-202ENST00000379160 SF3B3Q15393 1217 aaKnown RBP17.77■□□□□ 0.43
PCNA-202ENST00000379160 AIDAQ96BJ3 306 aa17.77■□□□□ 0.43
PCNA-202ENST00000379160 BCL2L13Q9BXK5 485 aa17.77■□□□□ 0.43
PCNA-202ENST00000379160 NSFL1CQ9UNZ2 370 aaKnown RBP17.77■□□□□ 0.43
PCNA-202ENST00000379160 LRRC37AA6NMS7 1700 aa17.76■□□□□ 0.43
PCNA-202ENST00000379160 COL4A1P02462 1669 aa17.76■□□□□ 0.43
PCNA-202ENST00000379160 YDJCA8MPS7 323 aa17.76■□□□□ 0.43
PCNA-202ENST00000379160 MNX1P50219 401 aaPredicted RBP17.76■□□□□ 0.43
PCNA-202ENST00000379160 CALD1Q05682 793 aaKnown RBP17.76■□□□□ 0.43
PCNA-202ENST00000379160 GOLGA2Q08379 1002 aa17.76■□□□□ 0.43
PCNA-202ENST00000379160 TNIP1Q15025 636 aa17.76■□□□□ 0.43
PCNA-202ENST00000379160 WDR33Q9C0J8 1336 aaKnown RBP17.76■□□□□ 0.43
PCNA-202ENST00000379160 TRPM7Q96QT4 1865 aa17.75■□□□□ 0.43
PCNA-202ENST00000379160 TRIM28Q13263 835 aaKnown RBP17.75■□□□□ 0.43
PCNA-202ENST00000379160 WASHC4Q2M389 1173 aa17.75■□□□□ 0.43
PCNA-202ENST00000379160 PAXIP1Q6ZW49 1069 aaPredicted RBP17.75■□□□□ 0.43
PCNA-202ENST00000379160 C8orf58Q8NAV2 365 aa17.75■□□□□ 0.43
PCNA-202ENST00000379160 SPOCK2Q92563 424 aa17.75■□□□□ 0.43
PCNA-202ENST00000379160 MYD88Q99836 296 aa17.75■□□□□ 0.43
PCNA-202ENST00000379160 RIMBP2O15034 1052 aa17.74■□□□□ 0.43
PCNA-202ENST00000379160 GPSM2P81274 684 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms