RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 FERMT2Q96AC1 680 aa17.05■□□□□ 0.32
EXT1-201ENST00000378204 NBPF7P0C2Y1 421 aaPredicted RBP17.05■□□□□ 0.32
EXT1-201ENST00000378204 AP1ARQ63HQ0 302 aa17.05■□□□□ 0.32
EXT1-201ENST00000378204 RSPH14Q9UHP6 348 aa17.05■□□□□ 0.32
EXT1-201ENST00000378204 PHF8Q9UPP1 1060 aa17.05■□□□□ 0.32
EXT1-201ENST00000378204 FOXO3O43524 673 aa17.05■□□□□ 0.32
EXT1-201ENST00000378204 UBE3BQ7Z3V4 1068 aa17.05■□□□□ 0.32
EXT1-201ENST00000378204 FSD2A1L4K1 749 aa17.05■□□□□ 0.32
EXT1-201ENST00000378204 EMILIN1Q9Y6C2 1016 aa17.05■□□□□ 0.32
EXT1-201ENST00000378204 SCAF11Q99590 1463 aaKnown RBP17.05■□□□□ 0.32
EXT1-201ENST00000378204 CHMP4BP1P59074 171 aa17.05■□□□□ 0.32
EXT1-201ENST00000378204 PPP1R42Q7Z4L9 355 aa17.05■□□□□ 0.32
EXT1-201ENST00000378204 IL16Q14005 1332 aa17.05■□□□□ 0.32
EXT1-201ENST00000378204 UBE4AQ14139 1066 aa17.05■□□□□ 0.32
EXT1-201ENST00000378204 CCDC144CPQ8IYA2 1237 aa17.05■□□□□ 0.32
EXT1-201ENST00000378204 LARP6Q9BRS8 491 aaKnown RBP17.04■□□□□ 0.32
EXT1-201ENST00000378204 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.04■□□□□ 0.32
EXT1-201ENST00000378204 V9GYY5 206 aaPredicted RBP17.04■□□□□ 0.32
EXT1-201ENST00000378204 CCDC172P0C7W6 258 aa17.04■□□□□ 0.32
EXT1-201ENST00000378204 GPTP24298 496 aa17.04■□□□□ 0.32
EXT1-201ENST00000378204 FERMT1Q9BQL6 677 aa17.04■□□□□ 0.32
EXT1-201ENST00000378204 PRPF4BQ13523 1007 aaKnown RBP17.04■□□□□ 0.32
EXT1-201ENST00000378204 WDR78Q5VTH9 848 aa17.04■□□□□ 0.32
EXT1-201ENST00000378204 JADE2Q9NQC1 790 aa17.04■□□□□ 0.32
EXT1-201ENST00000378204 RMND1Q9NWS8 449 aa17.04■□□□□ 0.32
EXT1-201ENST00000378204 MSL1Q68DK7 614 aa17.04■□□□□ 0.32
EXT1-201ENST00000378204 PLVAPQ9BX97 442 aa17.04■□□□□ 0.32
EXT1-201ENST00000378204 CD109Q6YHK3 1445 aa17.03■□□□□ 0.32
EXT1-201ENST00000378204 C6orf229H3BNL8 230 aa17.03■□□□□ 0.32
EXT1-201ENST00000378204 DNAJC21Q5F1R6 531 aaKnown RBP17.03■□□□□ 0.32
EXT1-201ENST00000378204 TTC22Q5TAA0 569 aa17.03■□□□□ 0.32
EXT1-201ENST00000378204 HLA-DOAP06340 250 aa17.03■□□□□ 0.32
EXT1-201ENST00000378204 EXOC5O00471 708 aa17.03■□□□□ 0.32
EXT1-201ENST00000378204 TBC1D32Q96NH3 1257 aa17.03■□□□□ 0.32
EXT1-201ENST00000378204 PI4KAP2A4QPH2 592 aa17.03■□□□□ 0.32
EXT1-201ENST00000378204 PI4KAP1Q8N8J0 262 aa17.03■□□□□ 0.32
EXT1-201ENST00000378204 SLC26A6Q9BXS9 759 aa17.03■□□□□ 0.32
EXT1-201ENST00000378204 BMP15O95972 392 aa17.03■□□□□ 0.32
EXT1-201ENST00000378204 SYKP43405 635 aa17.03■□□□□ 0.32
EXT1-201ENST00000378204 KLHL40Q2TBA0 621 aa17.03■□□□□ 0.32
EXT1-201ENST00000378204 ADGRL1O94910 1474 aa17.02■□□□□ 0.32
EXT1-201ENST00000378204 EBAG9O00559 213 aa17.02■□□□□ 0.32
EXT1-201ENST00000378204 TMTC2Q8N394 836 aa17.02■□□□□ 0.32
EXT1-201ENST00000378204 AMOTL2Q9Y2J4 779 aa17.02■□□□□ 0.32
EXT1-201ENST00000378204 OGFRQ9NZT2 677 aa17.02■□□□□ 0.32
EXT1-201ENST00000378204 ZBTB3Q9H5J0 574 aa17.02■□□□□ 0.32
EXT1-201ENST00000378204 EXOC1Q9NV70 894 aa17.02■□□□□ 0.32
EXT1-201ENST00000378204 MAP2K2P36507 400 aa17.02■□□□□ 0.31
EXT1-201ENST00000378204 CCDC160A6NGH7 325 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 IFNL2Q8IZJ0 200 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 VAT1LQ9HCJ6 419 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 SAMM50Q9Y512 469 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 PRC1O43663 620 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 HAND2P61296 217 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 CEP135Q66GS9 1140 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 CTAGE1Q96RT6 745 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 NAP1L3Q99457 506 aaPredicted RBP17.01■□□□□ 0.31
EXT1-201ENST00000378204 NCOA1Q15788 1441 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 KCNG4Q8TDN1 519 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 N4BP3O15049 544 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 DDX12PQ92771 950 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 C11orf95C9JLR9 678 aaPredicted RBP17.01■□□□□ 0.31
EXT1-201ENST00000378204 UBASH3AP57075 661 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 SH2D4BQ5SQS7 431 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 CCDC6Q16204 474 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 ISM2Q6H9L7 571 aa17.01■□□□□ 0.31
EXT1-201ENST00000378204 CRNKL1Q9BZJ0 848 aaKnown RBP17■□□□□ 0.31
EXT1-201ENST00000378204 CABP5Q9NP86 173 aa17■□□□□ 0.31
EXT1-201ENST00000378204 HOMER2Q9NSB8 354 aa17■□□□□ 0.31
EXT1-201ENST00000378204 ACTN2P35609 894 aa17■□□□□ 0.31
EXT1-201ENST00000378204 CCDC174Q6PII3 467 aa17■□□□□ 0.31
EXT1-201ENST00000378204 PANK2Q9BZ23 570 aa17■□□□□ 0.31
EXT1-201ENST00000378204 GNG11P61952 73 aa17■□□□□ 0.31
EXT1-201ENST00000378204 OTUD6BQ8N6M0 293 aa17■□□□□ 0.31
EXT1-201ENST00000378204 TRIM47Q96LD4 638 aa17■□□□□ 0.31
EXT1-201ENST00000378204 KRT23Q9C075 422 aa17■□□□□ 0.31
EXT1-201ENST00000378204 TMX1Q9H3N1 280 aa17■□□□□ 0.31
EXT1-201ENST00000378204 CCDC171Q6TFL3 1326 aa17■□□□□ 0.31
EXT1-201ENST00000378204 UQCRFS1P1P0C7P4 283 aa17■□□□□ 0.31
EXT1-201ENST00000378204 TTLL12Q14166 644 aaPredicted RBP17■□□□□ 0.31
EXT1-201ENST00000378204 WTAPQ15007 396 aa17■□□□□ 0.31
EXT1-201ENST00000378204 TBC1D5Q92609 795 aa17■□□□□ 0.31
EXT1-201ENST00000378204 SNRPA1P09661 255 aaKnown RBP17■□□□□ 0.31
EXT1-201ENST00000378204 ARFGAP3Q9NP61 516 aa17■□□□□ 0.31
EXT1-201ENST00000378204 ZSCAN22P10073 491 aaPredicted RBP16.99■□□□□ 0.31
EXT1-201ENST00000378204 CKAP4Q07065 602 aaKnown RBP16.99■□□□□ 0.31
EXT1-201ENST00000378204 STX8Q9UNK0 236 aa16.99■□□□□ 0.31
EXT1-201ENST00000378204 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.99■□□□□ 0.31
EXT1-201ENST00000378204 RALGAPBQ86X10 1494 aa16.99■□□□□ 0.31
EXT1-201ENST00000378204 ABCC5O15440 1437 aa16.99■□□□□ 0.31
EXT1-201ENST00000378204 ATP5J2-PTCD1G3V325 749 aa16.99■□□□□ 0.31
EXT1-201ENST00000378204 NUCB1Q02818 461 aa16.99■□□□□ 0.31
EXT1-201ENST00000378204 SNRKQ9NRH2 765 aa16.99■□□□□ 0.31
EXT1-201ENST00000378204 IKBKGQ9Y6K9 419 aa16.99■□□□□ 0.31
EXT1-201ENST00000378204 ERMNQ8TAM6 284 aa16.99■□□□□ 0.31
EXT1-201ENST00000378204 FBF1Q8TES7 1133 aa16.99■□□□□ 0.31
EXT1-201ENST00000378204 ZFP91Q96JP5 570 aaPredicted RBP16.99■□□□□ 0.31
EXT1-201ENST00000378204 ZBTB43O43298 467 aa16.98■□□□□ 0.31
EXT1-201ENST00000378204 TRAF1Q13077 416 aa16.98■□□□□ 0.31
EXT1-201ENST00000378204 HDAC1Q13547 482 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms